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The map label for this gene is fadF [H]

Identifier: 116620494

GI number: 116620494

Start: 1689870

End: 1691741

Strand: Direct

Name: fadF [H]

Synonym: Acid_1372

Alternate gene names: 116620494

Gene position: 1689870-1691741 (Clockwise)

Preceding gene: 116620490

Following gene: 116620495

Centisome position: 16.96

GC content: 62.5

Gene sequence:

>1872_bases
ATGAGCGACGCATCCTGGGTGGAGCGAGCACTCTTGCTCGTGTTCCTCCTTACTTCCCTGAGCCTGTTCTGGTACCGCTT
TCGTCGCGTGCTGAACATCATTCGCCAAGCCCGGAGCACACCCGATTTCGAGGTGTCGCCGGTGGGGCCGCGCATTCGCC
GGTTTCTGTGGGAAGTGATGCTGCAGGGGAAGGTGATCGAGCAGCGGCCGCTGCCCGGGCTGGCTCATGCCTTCGTCTAT
TGGGGATTTCTGGCGTTCGGGTTGATCACGATCAACCACATCGCTTCGGCATTCGGCATGCGTTTTCTGACGCCGGACGC
GGGATTCGGCGGTTTTTATTACGGTTTCGTGGCGGTGTGGGCGGTGGTGGTGGCGGTTTCGATCGCTGGCTTGTTCATAA
GGCGATTCGTGGCACGCCCGGTGTGGCTCGGCAAGGTGTCGCCCGAATCGGGCTTCATCGCGTTTCTGATTTTCACGCTG
ATGATCACTTATCTGGCGGGCATCTGGATGGATGAGGACTCCGCGGGCGGGCAGGCGGTCTGGTGGCTGCATACTGCGGC
GCTGTTGATCTTCCTACCGCTGATTCCGCATACGAAACACCTGCATCTCGTGCTGAGCCCGGTGACCGTGCTCCTGAAGC
GCGAGGGCTTCAGCCGTATCCCGCCGCTCTCCGGTGACGAAGATTTCGGACTGGTCGCGGGAAAGGACGTTACCAAAATC
GACGCGCTGCAGACCTTTTCCTGCGTGGAGTGCGGACGGTGTAGCGAGTTCTGTCCGGCGGTGGCGACCGGAAAAGTTCT
GAACCCGAAAGAAATCGTGCTCGGCATGCGCTCGTACCTCAATGAGTTCGGCGCGGCCGGTGAAGTGCCGCTGCTGGGTA
AACACATCTCCGAGGTCGCGGCCTTCCAGTGCACGACGTGCGGCGGCTGCGAATTCCAGTGCCCGGTAGGGATTCAACAC
CTGCCGATGATCGTCGGGCTGCGGCGCGGCGCCGTAAATACGGGGCAGTGGGAGAACGACTACGGTACCAAGCTGTTCCT
CAACCTGGAGCGCAACGGGAACGCCATGGGCTTTGCGGCCAGTGAGCGGCAGAAGTTCATCGAGAAGAACGCGCTGCCCT
TCTACGATGGCACGCAGGAGTACTGCCTGTGGCTGGGCTGCATGGGGGCGTACGATCCGCAGGGCCGCGAGATCGTGCTG
GCACTGGCGCGGGTGCTGCGTCATGCCGGGGTCACGTTCGGCGTGCTTCGGAAGGAGAAATGCACGGGCGATCCGGCGCG
CCGGTTAGGCAACGACCTGGCCTTTACCCAAGTGGCGGAGATCAACATCGAGGCGCTGAAAGCGGCCAACATCGGCAAGA
TGGTTTCGATCTGCCCGCATTGCGTTCGGACGATCGGGACGGACTGGCGCGAGGCCGGCGCAACATTCCAGATTGAGCAT
CACAGCGAATTGCTGGCTCGGCTGAAGGACAAGCTGCCCGCTCCGGCGGCGGGATCTGCGCGCGAGACAGTGGTCTATCA
CGACCCCTGCTACCTCGGACGATATCGCGACGTATACGAAGAGCCGCGATCGGTGGTGGCGCAGGCGGCCGAGTTGGTGG
AACCGCGGCGCACCCGGGAGCGCTCCTTTTGCTGTGGCGCGGGCGGCGGGCAGATGTTCCTTGGTGAAGAACAGGGCAAG
CGTGTGAATGTGGAGCGCGTGGAAGAACTGGTGGGCACGGGCGCGCAGGTGATCGGCACGGCCTGCCCGTTCTGTCAGAC
GATGTTCCGCGATGCGCTGGGCACGGTGACGCAGACACCGCCGAAACTGTTGGACATCGCGCAGATCACGGCGGCAGCGC
TTCCTCCGCAAGATTCTGTAGCGATTCAGTGA

Upstream 100 bases:

>100_bases
AAGCCGGCAGAGCCGGAAACGACGATCCGCAAAAGTCCCTCCAGGTCTTTATTCTAGCGGAGGCGGGCGGGGGTTCACAT
GCTACAGTCAAAATGAGTCT

Downstream 100 bases:

>100_bases
CATTTCGGCGCGAAATGGTATACTGTTTTTTGACGCGATGCAGAGTCGCGTCAATCAGCCATCCCTAGCGGGCGCGTAGC
TCAATTGGCAGAGCAACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MSDASWVERALLLVFLLTSLSLFWYRFRRVLNIIRQARSTPDFEVSPVGPRIRRFLWEVMLQGKVIEQRPLPGLAHAFVY
WGFLAFGLITINHIASAFGMRFLTPDAGFGGFYYGFVAVWAVVVAVSIAGLFIRRFVARPVWLGKVSPESGFIAFLIFTL
MITYLAGIWMDEDSAGGQAVWWLHTAALLIFLPLIPHTKHLHLVLSPVTVLLKREGFSRIPPLSGDEDFGLVAGKDVTKI
DALQTFSCVECGRCSEFCPAVATGKVLNPKEIVLGMRSYLNEFGAAGEVPLLGKHISEVAAFQCTTCGGCEFQCPVGIQH
LPMIVGLRRGAVNTGQWENDYGTKLFLNLERNGNAMGFAASERQKFIEKNALPFYDGTQEYCLWLGCMGAYDPQGREIVL
ALARVLRHAGVTFGVLRKEKCTGDPARRLGNDLAFTQVAEINIEALKAANIGKMVSICPHCVRTIGTDWREAGATFQIEH
HSELLARLKDKLPAPAAGSARETVVYHDPCYLGRYRDVYEEPRSVVAQAAELVEPRRTRERSFCCGAGGGQMFLGEEQGK
RVNVERVEELVGTGAQVIGTACPFCQTMFRDALGTVTQTPPKLLDIAQITAAALPPQDSVAIQ

Sequences:

>Translated_623_residues
MSDASWVERALLLVFLLTSLSLFWYRFRRVLNIIRQARSTPDFEVSPVGPRIRRFLWEVMLQGKVIEQRPLPGLAHAFVY
WGFLAFGLITINHIASAFGMRFLTPDAGFGGFYYGFVAVWAVVVAVSIAGLFIRRFVARPVWLGKVSPESGFIAFLIFTL
MITYLAGIWMDEDSAGGQAVWWLHTAALLIFLPLIPHTKHLHLVLSPVTVLLKREGFSRIPPLSGDEDFGLVAGKDVTKI
DALQTFSCVECGRCSEFCPAVATGKVLNPKEIVLGMRSYLNEFGAAGEVPLLGKHISEVAAFQCTTCGGCEFQCPVGIQH
LPMIVGLRRGAVNTGQWENDYGTKLFLNLERNGNAMGFAASERQKFIEKNALPFYDGTQEYCLWLGCMGAYDPQGREIVL
ALARVLRHAGVTFGVLRKEKCTGDPARRLGNDLAFTQVAEINIEALKAANIGKMVSICPHCVRTIGTDWREAGATFQIEH
HSELLARLKDKLPAPAAGSARETVVYHDPCYLGRYRDVYEEPRSVVAQAAELVEPRRTRERSFCCGAGGGQMFLGEEQGK
RVNVERVEELVGTGAQVIGTACPFCQTMFRDALGTVTQTPPKLLDIAQITAAALPPQDSVAIQ
>Mature_622_residues
SDASWVERALLLVFLLTSLSLFWYRFRRVLNIIRQARSTPDFEVSPVGPRIRRFLWEVMLQGKVIEQRPLPGLAHAFVYW
GFLAFGLITINHIASAFGMRFLTPDAGFGGFYYGFVAVWAVVVAVSIAGLFIRRFVARPVWLGKVSPESGFIAFLIFTLM
ITYLAGIWMDEDSAGGQAVWWLHTAALLIFLPLIPHTKHLHLVLSPVTVLLKREGFSRIPPLSGDEDFGLVAGKDVTKID
ALQTFSCVECGRCSEFCPAVATGKVLNPKEIVLGMRSYLNEFGAAGEVPLLGKHISEVAAFQCTTCGGCEFQCPVGIQHL
PMIVGLRRGAVNTGQWENDYGTKLFLNLERNGNAMGFAASERQKFIEKNALPFYDGTQEYCLWLGCMGAYDPQGREIVLA
LARVLRHAGVTFGVLRKEKCTGDPARRLGNDLAFTQVAEINIEALKAANIGKMVSICPHCVRTIGTDWREAGATFQIEHH
SELLARLKDKLPAPAAGSARETVVYHDPCYLGRYRDVYEEPRSVVAQAAELVEPRRTRERSFCCGAGGGQMFLGEEQGKR
VNVERVEELVGTGAQVIGTACPFCQTMFRDALGTVTQTPPKLLDIAQITAAALPPQDSVAIQ

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 68669; Mature: 68537

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDASWVERALLLVFLLTSLSLFWYRFRRVLNIIRQARSTPDFEVSPVGPRIRRFLWEVM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH
LQGKVIEQRPLPGLAHAFVYWGFLAFGLITINHIASAFGMRFLTPDAGFGGFYYGFVAVW
HCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH
AVVVAVSIAGLFIRRFVARPVWLGKVSPESGFIAFLIFTLMITYLAGIWMDEDSAGGQAV
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEE
WWLHTAALLIFLPLIPHTKHLHLVLSPVTVLLKREGFSRIPPLSGDEDFGLVAGKDVTKI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHH
DALQTFSCVECGRCSEFCPAVATGKVLNPKEIVLGMRSYLNEFGAAGEVPLLGKHISEVA
HHHHHHHHHHHCCCHHHCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AFQCTTCGGCEFQCPVGIQHLPMIVGLRRGAVNTGQWENDYGTKLFLNLERNGNAMGFAA
HHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEECCCH
SERQKFIEKNALPFYDGTQEYCLWLGCMGAYDPQGREIVLALARVLRHAGVTFGVLRKEK
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
CTGDPARRLGNDLAFTQVAEINIEALKAANIGKMVSICPHCVRTIGTDWREAGATFQIEH
CCCCHHHHCCCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEHH
HSELLARLKDKLPAPAAGSARETVVYHDPCYLGRYRDVYEEPRSVVAQAAELVEPRRTRE
HHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
RSFCCGAGGGQMFLGEEQGKRVNVERVEELVGTGAQVIGTACPFCQTMFRDALGTVTQTP
CCCEECCCCCCEEEECCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PKLLDIAQITAAALPPQDSVAIQ
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SDASWVERALLLVFLLTSLSLFWYRFRRVLNIIRQARSTPDFEVSPVGPRIRRFLWEVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH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HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]