| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620482
Identifier: 116620482
GI number: 116620482
Start: 1676425
End: 1677471
Strand: Reverse
Name: 116620482
Synonym: Acid_1360
Alternate gene names: NA
Gene position: 1677471-1676425 (Counterclockwise)
Preceding gene: 116620491
Following gene: 116620481
Centisome position: 16.83
GC content: 64.18
Gene sequence:
>1047_bases ATGGCCTCCAATCTGGAACTCACCACCAGCGAAAATCTGCCTGAACTGACTGATTTTCTCCTGGAAGTTTTCCGGATGAA TCGGGACGCCCCCTTTGTCCGTCCCGAGATGATGCGCTGGAAATATTTCGAGCCGCGTCCCGATTGGAACGGCCCCCGCA GCTACCTGATGTTCCGCGAAGATCGCATCTTCGCCCATGGCTGCGTAGTCCCGGAGACTTTTCGTACGCCTTCGGGGCGG GTCACCAGCATGCGCGTGATCGATTGGGCGGGCAGCCGCAACGTCCCCGCCGCCGGAGTGCTGATGATGCGCAAACTCGC GGAATTTACAGACACCGCCCTCGCCATCGGCGGCTCGCCCGACGCGGTTCGCGTGCTGCCGCGAATGAAGTTCGATCATC GCGGCGATGTTGACGTGTGGGTGCGAGTCGTGCGGCCCTGGCGGCAGTTCCGTACCGATCCCTTTCCGCGCGGTTGGAAG GCGCCGCTCCGCCTTGCCCGCAACACGTTGTGGAGCCGCGCGCCCATGCCCGCGCCACCGCCCGGCTGGACCGCCACGCG CGTCGAGCGCTTCGGCGACGAGCTCACCCGCGCTCTCGGCTTTCAGCCCAAGAGCTTCACCACCACCGAGCGCAGCGCCG GCATGCTCAACTACATGCTCTCCTGCCCGGGCAGCGCATTCTCCGGTTTCGTGCTGCTTCAGGGGGAGCGCGTGCGCGGC CACTGCATGTTGAGCCGCGTCTCCGGGCAGACCCGAATCGCCGAGGTCTGGGTGGATTCTGAACAGCCCGAAGATTGGCA GGCCGCCTTCGGTCTCGCCACCCTGCAGGCCGCCGACGATCCCGAGACCTGCGAGATCGTCGCCGTCACGTCCATAACGC CTGGCCGCGAGGCGCTGCGCCGGAATGGCTACCGTTATCGGCGCAACGACCCTATCTTCATTCTTGATCCGCAGCGGCGT CTCACGGACGCGCCCGAGTTGAATCTTAACTTGTTCGCTGGCGACGAATCCTACCTCTGCGTTCCGAGTTATCCGTACGA AACTTAG
Upstream 100 bases:
>100_bases GTGACTGTGAGAATGCATTTTTGAGCTGTTGGTTTGGGTCCATGAGGTCAAAGAACTAGACTACAATATACCAAAGGACC CCATTGAACCGCGCGTAAAC
Downstream 100 bases:
>100_bases CCCTCATGCCCGGATCAAAGACCATTGTTTCCGTCTACGGTTTTGAGCCGTTCCGCATCGGCGGCGGCGAGACCTTTATC CGCGAGCTCTCCCTCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MASNLELTTSENLPELTDFLLEVFRMNRDAPFVRPEMMRWKYFEPRPDWNGPRSYLMFREDRIFAHGCVVPETFRTPSGR VTSMRVIDWAGSRNVPAAGVLMMRKLAEFTDTALAIGGSPDAVRVLPRMKFDHRGDVDVWVRVVRPWRQFRTDPFPRGWK APLRLARNTLWSRAPMPAPPPGWTATRVERFGDELTRALGFQPKSFTTTERSAGMLNYMLSCPGSAFSGFVLLQGERVRG HCMLSRVSGQTRIAEVWVDSEQPEDWQAAFGLATLQAADDPETCEIVAVTSITPGREALRRNGYRYRRNDPIFILDPQRR LTDAPELNLNLFAGDESYLCVPSYPYET
Sequences:
>Translated_348_residues MASNLELTTSENLPELTDFLLEVFRMNRDAPFVRPEMMRWKYFEPRPDWNGPRSYLMFREDRIFAHGCVVPETFRTPSGR VTSMRVIDWAGSRNVPAAGVLMMRKLAEFTDTALAIGGSPDAVRVLPRMKFDHRGDVDVWVRVVRPWRQFRTDPFPRGWK APLRLARNTLWSRAPMPAPPPGWTATRVERFGDELTRALGFQPKSFTTTERSAGMLNYMLSCPGSAFSGFVLLQGERVRG HCMLSRVSGQTRIAEVWVDSEQPEDWQAAFGLATLQAADDPETCEIVAVTSITPGREALRRNGYRYRRNDPIFILDPQRR LTDAPELNLNLFAGDESYLCVPSYPYET >Mature_347_residues ASNLELTTSENLPELTDFLLEVFRMNRDAPFVRPEMMRWKYFEPRPDWNGPRSYLMFREDRIFAHGCVVPETFRTPSGRV TSMRVIDWAGSRNVPAAGVLMMRKLAEFTDTALAIGGSPDAVRVLPRMKFDHRGDVDVWVRVVRPWRQFRTDPFPRGWKA PLRLARNTLWSRAPMPAPPPGWTATRVERFGDELTRALGFQPKSFTTTERSAGMLNYMLSCPGSAFSGFVLLQGERVRGH CMLSRVSGQTRIAEVWVDSEQPEDWQAAFGLATLQAADDPETCEIVAVTSITPGREALRRNGYRYRRNDPIFILDPQRRL TDAPELNLNLFAGDESYLCVPSYPYET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39744; Mature: 39613
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNLELTTSENLPELTDFLLEVFRMNRDAPFVRPEMMRWKYFEPRPDWNGPRSYLMFRE CCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCCCCCCCCEEEEEC DRIFAHGCVVPETFRTPSGRVTSMRVIDWAGSRNVPAAGVLMMRKLAEFTDTALAIGGSP CEEEECCCCCCHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCC DAVRVLPRMKFDHRGDVDVWVRVVRPWRQFRTDPFPRGWKAPLRLARNTLWSRAPMPAPP CCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC PGWTATRVERFGDELTRALGFQPKSFTTTERSAGMLNYMLSCPGSAFSGFVLLQGERVRG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC HCMLSRVSGQTRIAEVWVDSEQPEDWQAAFGLATLQAADDPETCEIVAVTSITPGREALR EEEEEECCCCEEEEEEEECCCCCCHHHHHHCEEEEECCCCCCCEEEEEEECCCCCHHHHH RNGYRYRRNDPIFILDPQRRLTDAPELNLNLFAGDESYLCVPSYPYET HCCCEEECCCCEEEECCHHHCCCCCCCEEEEEECCCCEEEECCCCCCC >Mature Secondary Structure ASNLELTTSENLPELTDFLLEVFRMNRDAPFVRPEMMRWKYFEPRPDWNGPRSYLMFRE CCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCCCCCCCCEEEEEC DRIFAHGCVVPETFRTPSGRVTSMRVIDWAGSRNVPAAGVLMMRKLAEFTDTALAIGGSP CEEEECCCCCCHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCC DAVRVLPRMKFDHRGDVDVWVRVVRPWRQFRTDPFPRGWKAPLRLARNTLWSRAPMPAPP CCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC PGWTATRVERFGDELTRALGFQPKSFTTTERSAGMLNYMLSCPGSAFSGFVLLQGERVRG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC HCMLSRVSGQTRIAEVWVDSEQPEDWQAAFGLATLQAADDPETCEIVAVTSITPGREALR EEEEEECCCCEEEEEEEECCCCCCHHHHHHCEEEEECCCCCCCEEEEEEECCCCCHHHHH RNGYRYRRNDPIFILDPQRRLTDAPELNLNLFAGDESYLCVPSYPYET HCCCEEECCCCEEEECCHHHCCCCCCCEEEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA