| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620458
Identifier: 116620458
GI number: 116620458
Start: 1647867
End: 1649240
Strand: Reverse
Name: 116620458
Synonym: Acid_1336
Alternate gene names: NA
Gene position: 1649240-1647867 (Counterclockwise)
Preceding gene: 116620459
Following gene: 116620457
Centisome position: 16.55
GC content: 64.56
Gene sequence:
>1374_bases ATGAGTGACAGCGAAACCTCCCGTCGTCGCTTCCTGACCACCGCCGGGGTGTCCACCCTGGCCGGCATGACGATTCCGCA TGTCCATGCGGCCGAAAACAACACCATCCAACTCGCCCTCGTGGGCTGCGGCGGCCGCGGCACCGGGGCCGCCGAAAACG CCCTCGGCGTCAAGAACGGCCCCATCAAACTCGTCGCCATGGCCGACGTCTTCCCCCAGAAACTCAGCGACAGCCACGGC CACTTGCACCAGAAATTCGCCGACCAGGTGGACGTCCCCGAAGATCGCAAATTCATCGGCTTCGACGGCTACCGCAAAGC CCTCGATTGCCTCAAGCCCGGCGACGTCGCCATCTTCGCCACTCCTCCCGCCTTCCGCTGGGTGCAGTTCAGCTACGCCA TCGAGAAGGGTCTCAACACCTTCATGGAGAAACCCGTCACCGTGGACGGCCCCACCACCCGCCGCATGCTCAAGCTCGGC GAAACCTCCGTGCAGAAGAACCTCAAAGTCGGCGTCGGACTGATGATCCGCCATTGCCGCGCCCGCCAGGAACTCCTCGA CCGCATTCGCGCCGGCCAGATCGGCGACATCGTCTCCATGCGCGCCTACCGCATGGGCTCCGGAGGCGGCACCGTTCCCC CCAAACCCGAGGGCATCACGGAACTGCTCCACCAGATCCGCTACTTCCACGCCTTCCTCTGGGCCAGCGGCGGCGTTTTC AGCGATTTCTTCATCCACCAGATAGACGAGTGCTCCTGGATGAAAGGCGCCTGGCCCGTCGAAGCCCAGGCCGTCGGCGG CCGCCACTATCGCGGCAATTCGCTCGATCAGAACCTCGATACCTACGCCGTCGAGTACACCTACCCCGATGGCGTCAAGC TCTTCTACGACGGCCGCAACATGCCCGGCTGCCTCAACGAATTCGCCAGCTACGTCCACGGCGCCAAGGGCTCCGCCGTC ATCTCCACCAACGCCCACACTCCCGGCCGCACCCGCATCTACAAGGGCCAGAAAATCCCCCGCTGGACACCCGGCCAGAA TCCGGCCTCCGACCCGAACCTCGTCTGGGCCTATCCCCAGCCCGAACACTCACCCTACGACTACGAGTGGGAGGATCTCA TCGCCGCCATCCGCGAAGACAAGCCGTACAACGAGGTGAAGCGCGGCGCCGAAGCCAGCCTCGTCGGCTCAATGGGCCGC ATGGCGGCGCACACCGGCCAGGTCATCACCTTCGACCAGATGATGAATTGCGACCACGAATTCGCCCCTGATGTGGACAA GCTGACCATGGACGGCCCCGCGCCCCTACGCCTCGGCCTCGACGGCAAATACGCCGTCCCCGAGCCCGGCATCAAGAAGA CGCGCGAATACTGA
Upstream 100 bases:
>100_bases CTTGCGGCCCCCGCCGCTCTGTGGGGGGCAGCCAATCCTGGCTGCGCGCCCAAACACTCCATCCACTTCTTTGCGCGATC TACGCTAAGCTGTTCCTCAA
Downstream 100 bases:
>100_bases CCATGAACACCGAATGGGTTCGCACCTTCTGCATGGCCCTTCCCCACACCACGGAAACCGTGCAGTGGGGTGCGAACCTC GTCTTCAAAATCGGCGGCCG
Product: putative streptomycin biosynthesis protein StrI
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase; Dehydrogenase; Streptomycin Biosynthesis Protein StrI; Hydrogenase
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MSDSETSRRRFLTTAGVSTLAGMTIPHVHAAENNTIQLALVGCGGRGTGAAENALGVKNGPIKLVAMADVFPQKLSDSHG HLHQKFADQVDVPEDRKFIGFDGYRKALDCLKPGDVAIFATPPAFRWVQFSYAIEKGLNTFMEKPVTVDGPTTRRMLKLG ETSVQKNLKVGVGLMIRHCRARQELLDRIRAGQIGDIVSMRAYRMGSGGGTVPPKPEGITELLHQIRYFHAFLWASGGVF SDFFIHQIDECSWMKGAWPVEAQAVGGRHYRGNSLDQNLDTYAVEYTYPDGVKLFYDGRNMPGCLNEFASYVHGAKGSAV ISTNAHTPGRTRIYKGQKIPRWTPGQNPASDPNLVWAYPQPEHSPYDYEWEDLIAAIREDKPYNEVKRGAEASLVGSMGR MAAHTGQVITFDQMMNCDHEFAPDVDKLTMDGPAPLRLGLDGKYAVPEPGIKKTREY
Sequences:
>Translated_457_residues MSDSETSRRRFLTTAGVSTLAGMTIPHVHAAENNTIQLALVGCGGRGTGAAENALGVKNGPIKLVAMADVFPQKLSDSHG HLHQKFADQVDVPEDRKFIGFDGYRKALDCLKPGDVAIFATPPAFRWVQFSYAIEKGLNTFMEKPVTVDGPTTRRMLKLG ETSVQKNLKVGVGLMIRHCRARQELLDRIRAGQIGDIVSMRAYRMGSGGGTVPPKPEGITELLHQIRYFHAFLWASGGVF SDFFIHQIDECSWMKGAWPVEAQAVGGRHYRGNSLDQNLDTYAVEYTYPDGVKLFYDGRNMPGCLNEFASYVHGAKGSAV ISTNAHTPGRTRIYKGQKIPRWTPGQNPASDPNLVWAYPQPEHSPYDYEWEDLIAAIREDKPYNEVKRGAEASLVGSMGR MAAHTGQVITFDQMMNCDHEFAPDVDKLTMDGPAPLRLGLDGKYAVPEPGIKKTREY >Mature_456_residues SDSETSRRRFLTTAGVSTLAGMTIPHVHAAENNTIQLALVGCGGRGTGAAENALGVKNGPIKLVAMADVFPQKLSDSHGH LHQKFADQVDVPEDRKFIGFDGYRKALDCLKPGDVAIFATPPAFRWVQFSYAIEKGLNTFMEKPVTVDGPTTRRMLKLGE TSVQKNLKVGVGLMIRHCRARQELLDRIRAGQIGDIVSMRAYRMGSGGGTVPPKPEGITELLHQIRYFHAFLWASGGVFS DFFIHQIDECSWMKGAWPVEAQAVGGRHYRGNSLDQNLDTYAVEYTYPDGVKLFYDGRNMPGCLNEFASYVHGAKGSAVI STNAHTPGRTRIYKGQKIPRWTPGQNPASDPNLVWAYPQPEHSPYDYEWEDLIAAIREDKPYNEVKRGAEASLVGSMGRM AAHTGQVITFDQMMNCDHEFAPDVDKLTMDGPAPLRLGLDGKYAVPEPGIKKTREY
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50476; Mature: 50345
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSETSRRRFLTTAGVSTLAGMTIPHVHAAENNTIQLALVGCGGRGTGAAENALGVKNG CCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCC PIKLVAMADVFPQKLSDSHGHLHQKFADQVDVPEDRKFIGFDGYRKALDCLKPGDVAIFA CEEEEEEHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCEEEEE TPPAFRWVQFSYAIEKGLNTFMEKPVTVDGPTTRRMLKLGETSVQKNLKVGVGLMIRHCR CCCCCCHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHH ARQELLDRIRAGQIGDIVSMRAYRMGSGGGTVPPKPEGITELLHQIRYFHAFLWASGGVF HHHHHHHHHHCCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH SDFFIHQIDECSWMKGAWPVEAQAVGGRHYRGNSLDQNLDTYAVEYTYPDGVKLFYDGRN HHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCC MPGCLNEFASYVHGAKGSAVISTNAHTPGRTRIYKGQKIPRWTPGQNPASDPNLVWAYPQ CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCC PEHSPYDYEWEDLIAAIREDKPYNEVKRGAEASLVGSMGRMAAHTGQVITFDQMMNCDHE CCCCCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHHCCCCC FAPDVDKLTMDGPAPLRLGLDGKYAVPEPGIKKTREY CCCCHHHEECCCCCCEEECCCCCCCCCCCCCHHCCCC >Mature Secondary Structure SDSETSRRRFLTTAGVSTLAGMTIPHVHAAENNTIQLALVGCGGRGTGAAENALGVKNG CCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCC PIKLVAMADVFPQKLSDSHGHLHQKFADQVDVPEDRKFIGFDGYRKALDCLKPGDVAIFA CEEEEEEHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCEEEEE TPPAFRWVQFSYAIEKGLNTFMEKPVTVDGPTTRRMLKLGETSVQKNLKVGVGLMIRHCR CCCCCCHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHH ARQELLDRIRAGQIGDIVSMRAYRMGSGGGTVPPKPEGITELLHQIRYFHAFLWASGGVF HHHHHHHHHHCCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH SDFFIHQIDECSWMKGAWPVEAQAVGGRHYRGNSLDQNLDTYAVEYTYPDGVKLFYDGRN HHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCC MPGCLNEFASYVHGAKGSAVISTNAHTPGRTRIYKGQKIPRWTPGQNPASDPNLVWAYPQ CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCC PEHSPYDYEWEDLIAAIREDKPYNEVKRGAEASLVGSMGRMAAHTGQVITFDQMMNCDHE CCCCCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHHCCCCC FAPDVDKLTMDGPAPLRLGLDGKYAVPEPGIKKTREY CCCCHHHEECCCCCCEEECCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA