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The map label for this gene is ygbL [C]

Identifier: 116620456

GI number: 116620456

Start: 1646475

End: 1647515

Strand: Direct

Name: ygbL [C]

Synonym: Acid_1334

Alternate gene names: 116620456

Gene position: 1646475-1647515 (Clockwise)

Preceding gene: 116620455

Following gene: 116620460

Centisome position: 16.52

GC content: 64.65

Gene sequence:

>1041_bases
ATGAAATCGATCGACCTGACCCAAGAAAAAGTCATCACACTGGCCGACCTGGCAGCGGCGGCGCAGGCCGACACTACGGA
GCTCCTGTTGAGCGAGAACGCCGTGGTGACGCCCTCGGCGCTGGAATTCGTGGAGCAGCGCAAGATCTCGGTGCGGCGCG
GCGCGGGCAGTCTGGCGCAGGCGCAGGCCACGGGCGCGATCCAGGAGCTGTTTAATTGCGCGGAAGCGCAGGCGGTGAAG
GAAGAGATCTGCAATGTGGGGCGGAAGCTCTGGCAGCGGCAGTACGTGGATGGGAATGGCGGCAACATCTCATACCGGAT
CGGCCCCAACGCGGTGATCTGCACGCCGACGCTGATGAGCAAAGCGGACTTGCGGCCGCAGGACCTCTGCATGGTGGATT
TGGAGGGCAAGCAACTGGCGGGCGGGCGGCCGCGCACCAGCGAGATCCTGATGCACCTGGAGATTTACAAGGAAGTGCCG
GAGGCCAAGGGCGTGGTGCACTGCCACCCGGCGCACGCGACCGCATACGCGATCACGGGGCGGGTGCCGCCGACGTGCAT
CATCCCGGAGTACGAAGTGTTTATCGGGAAGGTGGCGCTCTCGCCGTACGAGACGCCAGGGACGCCGGAGTTCGCGCGGA
CGGTGATTCCCTTCGTGAAGAATCACAATACGCTGCTGCTGGCGAATCACGGGATCGTGTGCTGGGCGGATACGGTTACG
CATGCCGAGTGGTATGCGGAAGTGGTGGACACGTACTGCTGGACGCTGATGCTGGCGGCGCAATTGGGGACGCCGGTCTC
GCACATCGCGAACGAGAAGGCGGCCGATCTGCTGGCGATCAAGAAGAAGCTGGGGCTGCCGGATCCGCGCCACGAGTTGA
AGGAGTGCGCGCTGTGCGACCTGCCGGAGATTCCGGGATCGATCGCGATTGCGCCGCGGACTTGCGGCAACGGGGAGACG
TCGCTGAGCGGTGCGGATGTGGAGGCGATTGTGCAGGCGGTGACGGACCGTGTGGTGGCGGCGCTGAGAGAGGGGAAGTA
A

Upstream 100 bases:

>100_bases
CCGACCGGGGAGGGCGTTACCACGCCGATGACGTTTACGCGCCAGCGCCGCATCGTGATCGGCGGCGGGGCATTACGGAT
TCTCTAACGAGTTCACACCC

Downstream 100 bases:

>100_bases
GGACTCATGCCAACTCGCGTTGCACCTTCTTGGTGAGTTTGGCGAAGACCAGGGCGTAGGCATTGCGCAAGAGGCGGCGG
AGTTCCGGAGTGGTGAGGGC

Product: class II aldolase/adducin family protein

Products: glycerone phosphate; (S)-lactaldehyde

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKSIDLTQEKVITLADLAAAAQADTTELLLSENAVVTPSALEFVEQRKISVRRGAGSLAQAQATGAIQELFNCAEAQAVK
EEICNVGRKLWQRQYVDGNGGNISYRIGPNAVICTPTLMSKADLRPQDLCMVDLEGKQLAGGRPRTSEILMHLEIYKEVP
EAKGVVHCHPAHATAYAITGRVPPTCIIPEYEVFIGKVALSPYETPGTPEFARTVIPFVKNHNTLLLANHGIVCWADTVT
HAEWYAEVVDTYCWTLMLAAQLGTPVSHIANEKAADLLAIKKKLGLPDPRHELKECALCDLPEIPGSIAIAPRTCGNGET
SLSGADVEAIVQAVTDRVVAALREGK

Sequences:

>Translated_346_residues
MKSIDLTQEKVITLADLAAAAQADTTELLLSENAVVTPSALEFVEQRKISVRRGAGSLAQAQATGAIQELFNCAEAQAVK
EEICNVGRKLWQRQYVDGNGGNISYRIGPNAVICTPTLMSKADLRPQDLCMVDLEGKQLAGGRPRTSEILMHLEIYKEVP
EAKGVVHCHPAHATAYAITGRVPPTCIIPEYEVFIGKVALSPYETPGTPEFARTVIPFVKNHNTLLLANHGIVCWADTVT
HAEWYAEVVDTYCWTLMLAAQLGTPVSHIANEKAADLLAIKKKLGLPDPRHELKECALCDLPEIPGSIAIAPRTCGNGET
SLSGADVEAIVQAVTDRVVAALREGK
>Mature_346_residues
MKSIDLTQEKVITLADLAAAAQADTTELLLSENAVVTPSALEFVEQRKISVRRGAGSLAQAQATGAIQELFNCAEAQAVK
EEICNVGRKLWQRQYVDGNGGNISYRIGPNAVICTPTLMSKADLRPQDLCMVDLEGKQLAGGRPRTSEILMHLEIYKEVP
EAKGVVHCHPAHATAYAITGRVPPTCIIPEYEVFIGKVALSPYETPGTPEFARTVIPFVKNHNTLLLANHGIVCWADTVT
HAEWYAEVVDTYCWTLMLAAQLGTPVSHIANEKAADLLAIKKKLGLPDPRHELKECALCDLPEIPGSIAIAPRTCGNGET
SLSGADVEAIVQAVTDRVVAALREGK

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=170, Percent_Identity=30.5882352941176, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789164, Length=190, Percent_Identity=28.9473684210526, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790642, Length=205, Percent_Identity=24.8780487804878, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: 4.1.2.17

Molecular weight: Translated: 37309; Mature: 37309

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIDLTQEKVITLADLAAAAQADTTELLLSENAVVTPSALEFVEQRKISVRRGAGSLAQ
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEECHHHHHHHHHHHHHHHCCCCCHHH
AQATGAIQELFNCAEAQAVKEEICNVGRKLWQRQYVDGNGGNISYRIGPNAVICTPTLMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCHHHH
KADLRPQDLCMVDLEGKQLAGGRPRTSEILMHLEIYKEVPEAKGVVHCHPAHATAYAITG
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHCCEEEEECCCCEEEEEEC
RVPPTCIIPEYEVFIGKVALSPYETPGTPEFARTVIPFVKNHNTLLLANHGIVCWADTVT
CCCCEEECCCHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEEECHHH
HAEWYAEVVDTYCWTLMLAAQLGTPVSHIANEKAADLLAIKKKLGLPDPRHELKECALCD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
LPEIPGSIAIAPRTCGNGETSLSGADVEAIVQAVTDRVVAALREGK
CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSIDLTQEKVITLADLAAAAQADTTELLLSENAVVTPSALEFVEQRKISVRRGAGSLAQ
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEECHHHHHHHHHHHHHHHCCCCCHHH
AQATGAIQELFNCAEAQAVKEEICNVGRKLWQRQYVDGNGGNISYRIGPNAVICTPTLMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCHHHH
KADLRPQDLCMVDLEGKQLAGGRPRTSEILMHLEIYKEVPEAKGVVHCHPAHATAYAITG
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHCCEEEEECCCCEEEEEEC
RVPPTCIIPEYEVFIGKVALSPYETPGTPEFARTVIPFVKNHNTLLLANHGIVCWADTVT
CCCCEEECCCHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEEECHHH
HAEWYAEVVDTYCWTLMLAAQLGTPVSHIANEKAADLLAIKKKLGLPDPRHELKECALCD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
LPEIPGSIAIAPRTCGNGETSLSGADVEAIVQAVTDRVVAALREGK
CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-fuculose 1-phosphate

Specific reaction: L-fuculose 1-phosphate = glycerone phosphate + (S)-lactaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]