| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is pqqL [C]
Identifier: 116620450
GI number: 116620450
Start: 1638932
End: 1641601
Strand: Direct
Name: pqqL [C]
Synonym: Acid_1328
Alternate gene names: 116620450
Gene position: 1638932-1641601 (Clockwise)
Preceding gene: 116620449
Following gene: 116620451
Centisome position: 16.45
GC content: 61.39
Gene sequence:
>2670_bases ATGATTGCAACAACTAGAAGGTTTTTGTCCAGAGCTTTTCTGGGCGCGGTCGCGGTCTGCGGTTTGGTTTTGACGGCGGC TCCGAAGCCTGTCCAGGAAGTGTCGAGGGCGACGCTGGACAATGGTCTTCGAGTCGTGATTGTTCGCAACTCCCTGGCGC CCGTGGTCACCACGGTGATGAACTACCTGGTTGGATCGAACGATGCTCCAGAGGGTTTCCCGGGCACGGCCCACGCTTTG GAACACATGATGTTCCGCGGAAGTCCGGAGCTTTCCGCCGATCAGCTGGCCAACATCGCGGCGGCGATGGGGGGCGATTT TAACGCGGACACGCAGCAATCGATCACGCGGTACTTCTTCACGGTGCCGAAGCAAGACCTGGAGGTAGCGCTGCATATCG AATCGATCCGGATGGGGGATCTGCTGGCCAGCGACGCGCTTTGGGAACATGAGCGCGGCGCGATCGAGCAGGAGGTGGCG GGCGACGTTTCCGATCCGGAGTACGTGCTTTACACCAAGCTGTTGTCGGCGATGTTCCGTGGAACCGCTTACGAGCACGA TGCACTGGGTACGCGCGCTTCCTTCGATGCGACCACGGGCGGCATGCTGAAGAAATTCTACGAGAGCTGGTACGCTCCGA ACAACGCGATCCTGGTGATCTGCGGCGACGTGGATGCCGCCGCGACGATGGCGACGGTGAAAGACCTGTTCGGGGCTATC CCGGCCAAGACGCTGCCGGCAAGGCACCGGGTGGAATTGGAACCGATTAAGCCCGAAACTTTGCAGCTTGCCACGGACCT GCCGTATGGGCTTGCGGTGGCCGCGTTCCGCTGGCCCGGCTCGAAGAGTCCCGATTTCGCGGCGGCGCAGGTTCTGGCGG ATGTCCTCGGCAGCGAACGCGGCGGGCTGCGGGACCTGGTGCCGCGAGGGCAGGCATTGAGCGCGAGTTTCTCTTTTGAC AGTTTCCAGGAAGCGACGCTGGCGTACGCCCAGGCGGCCTTTCCGGCGGGAGGAGACGGGGCGGGGCTGCTCCGTCAGGT GCGTGAAGTTCTCGCGGGTATAGCCAAGAACGGAGTCGCGGAGGAATTGATCGACGCGGCAAAGCGGCACGAGACCGCCG ACGCGGAGTTCAAGAAGAATTCGATCGCGGATCTCGCTATGTTCTGGTCGGAGGCCGTGGCTTTGGAAGGCCGGCAGTCT CCGAGCGACGATATCGAGGCAATTCAGAAGGTCACGGCAGACGATGTCAGGCGGGTCGCGCGCAGGCTGCTGAGCCCGGA GGAATCGATGTCGGCGATTTTGAGGCCACAGGCTTCGGGGAAGCCGGTTTCCACGTCGTCATTCGGCAAACCTGAATCTT TTGCGAGTCCGGACAAGCCCGCCGCTCCGCTTCCCGAATGGGCGCAAAAGGTGAACCAGCTCTCGATACCAGTTTCGAAT GTACATCCGCAGATCACGACGCTGTCGAACGGATTGAGACTGATCGTGCAGCCGGTGACGGCCAGCGACACGGTCAGCGT GTTCGGACGGGTCCAGAATATCGGCCTGAAGGACTCCAAGGGGCAAGAAGGCGTGGATGAGGTGCTGGACGAACTGCTTT CTTATGGGACGGTGTCGTTAGACCGGGCAGGGTTTCAAAAGGCGCTGGACGACATTGGGGCCAACGAAAATGCCGGAGCG GATTTTTCGCTGGAGGTGCCGGCGAGCGAGTTTGACCGCGGGGTGGCGCTGCTGGCCGAGAACCAACTGCATCCGGCGCT GCCAGCGAGCGCGTTTAAGACCGTCCAGCGGCAGTTCGCGGAGCGCATGGCGGGAGAAGGGCAGAGCGCCGCGTACCTGG CGGAGCATACGCTGGAATCGGCACTGCTGCCGAAAAACGATCCCGATCTTCGCCACGCCACGTCGCGGAGTGTTTCGTCG CTATCGCTGAAGGATGTACGGAATTATTACAAGCGCGCGTTCCAGCCTGACCTTACGACGATCGTGGTGGTGGGCAATAT TACGCCGGAACGCGCGCGCGAGGTGATTGAGCGCAATTTCGGGAGTTGGAAATCGCATGGGTCGAGGCGCCGGGCAGTTC CGCCGGCGGTGGCGGCGAACCAGCCCTCGAGCACGGAAGTGCCGAATGACAGCCGCGTGCAGGCGGACGTCACCCTGGCG GAGACTTTGCCGGTGCCGCGAACGGATCCGGACTACTACACATTGAATCTGGGAAGCCAGGTTTTGGGGGGAGCCTTTTA TGCGAGCCGACTGTCGCGTGATCTTCGCGAGAACAGCGGGCTGGTGTATTCCGTTTCCTCATCTCTCGAAGCGGAGTCGA CGCGGGCGTTCTACGTGATCAGCTACGGGTGCGATCCTCGGAATGTTGCGAAGGTCCGCGCGATTGTGCAACGCGATCTG AAGGAGATGCAGACGACTGCGGTGCCGGAGGAAACGTTGAAGCAGGCGAAAGTGCTGCTGCTTAAGCAAGTCCCGCTTTC AGAGGCGAGCGTTCGGAGCATTGCGGAGGGGTTGATTTCGAGCGCTGTGAACGGGCTTCCGTTGAATGAGCCGATCGTGG CGGCAAATATGTATGCCAAGGTGACCGCGGAGCAGGTGCAGGCTGCGTTTGCCAAGTGGATTCGGCCGAATGACTTCGTG GAGGTCATCGAGGGGCCGAGCGCGAAGTAA
Upstream 100 bases:
>100_bases GGTCACGGCTCTGATGGGGTACCGAATTTACGGTTCGGATGTTGCGGTTTGCGAGCAAACAAAAGCAGTGTAATAGTCGT CCAGTCTGCATTTAAAACGT
Downstream 100 bases:
>100_bases GGGGCGTGGTGTAAAGGGGCGATCCCGGGCGACTGCGGGGAAAGCCGGAAAGCCGGCTGCAGCCAGGATTGGCTGCCCCA CAGGGCGGCGAGCCGCATTG
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 889; Mature: 889
Protein sequence:
>889_residues MIATTRRFLSRAFLGAVAVCGLVLTAAPKPVQEVSRATLDNGLRVVIVRNSLAPVVTTVMNYLVGSNDAPEGFPGTAHAL EHMMFRGSPELSADQLANIAAAMGGDFNADTQQSITRYFFTVPKQDLEVALHIESIRMGDLLASDALWEHERGAIEQEVA GDVSDPEYVLYTKLLSAMFRGTAYEHDALGTRASFDATTGGMLKKFYESWYAPNNAILVICGDVDAAATMATVKDLFGAI PAKTLPARHRVELEPIKPETLQLATDLPYGLAVAAFRWPGSKSPDFAAAQVLADVLGSERGGLRDLVPRGQALSASFSFD SFQEATLAYAQAAFPAGGDGAGLLRQVREVLAGIAKNGVAEELIDAAKRHETADAEFKKNSIADLAMFWSEAVALEGRQS PSDDIEAIQKVTADDVRRVARRLLSPEESMSAILRPQASGKPVSTSSFGKPESFASPDKPAAPLPEWAQKVNQLSIPVSN VHPQITTLSNGLRLIVQPVTASDTVSVFGRVQNIGLKDSKGQEGVDEVLDELLSYGTVSLDRAGFQKALDDIGANENAGA DFSLEVPASEFDRGVALLAENQLHPALPASAFKTVQRQFAERMAGEGQSAAYLAEHTLESALLPKNDPDLRHATSRSVSS LSLKDVRNYYKRAFQPDLTTIVVVGNITPERAREVIERNFGSWKSHGSRRRAVPPAVAANQPSSTEVPNDSRVQADVTLA ETLPVPRTDPDYYTLNLGSQVLGGAFYASRLSRDLRENSGLVYSVSSSLEAESTRAFYVISYGCDPRNVAKVRAIVQRDL KEMQTTAVPEETLKQAKVLLLKQVPLSEASVRSIAEGLISSAVNGLPLNEPIVAANMYAKVTAEQVQAAFAKWIRPNDFV EVIEGPSAK
Sequences:
>Translated_889_residues MIATTRRFLSRAFLGAVAVCGLVLTAAPKPVQEVSRATLDNGLRVVIVRNSLAPVVTTVMNYLVGSNDAPEGFPGTAHAL EHMMFRGSPELSADQLANIAAAMGGDFNADTQQSITRYFFTVPKQDLEVALHIESIRMGDLLASDALWEHERGAIEQEVA GDVSDPEYVLYTKLLSAMFRGTAYEHDALGTRASFDATTGGMLKKFYESWYAPNNAILVICGDVDAAATMATVKDLFGAI PAKTLPARHRVELEPIKPETLQLATDLPYGLAVAAFRWPGSKSPDFAAAQVLADVLGSERGGLRDLVPRGQALSASFSFD SFQEATLAYAQAAFPAGGDGAGLLRQVREVLAGIAKNGVAEELIDAAKRHETADAEFKKNSIADLAMFWSEAVALEGRQS PSDDIEAIQKVTADDVRRVARRLLSPEESMSAILRPQASGKPVSTSSFGKPESFASPDKPAAPLPEWAQKVNQLSIPVSN VHPQITTLSNGLRLIVQPVTASDTVSVFGRVQNIGLKDSKGQEGVDEVLDELLSYGTVSLDRAGFQKALDDIGANENAGA DFSLEVPASEFDRGVALLAENQLHPALPASAFKTVQRQFAERMAGEGQSAAYLAEHTLESALLPKNDPDLRHATSRSVSS LSLKDVRNYYKRAFQPDLTTIVVVGNITPERAREVIERNFGSWKSHGSRRRAVPPAVAANQPSSTEVPNDSRVQADVTLA ETLPVPRTDPDYYTLNLGSQVLGGAFYASRLSRDLRENSGLVYSVSSSLEAESTRAFYVISYGCDPRNVAKVRAIVQRDL KEMQTTAVPEETLKQAKVLLLKQVPLSEASVRSIAEGLISSAVNGLPLNEPIVAANMYAKVTAEQVQAAFAKWIRPNDFV EVIEGPSAK >Mature_889_residues MIATTRRFLSRAFLGAVAVCGLVLTAAPKPVQEVSRATLDNGLRVVIVRNSLAPVVTTVMNYLVGSNDAPEGFPGTAHAL EHMMFRGSPELSADQLANIAAAMGGDFNADTQQSITRYFFTVPKQDLEVALHIESIRMGDLLASDALWEHERGAIEQEVA GDVSDPEYVLYTKLLSAMFRGTAYEHDALGTRASFDATTGGMLKKFYESWYAPNNAILVICGDVDAAATMATVKDLFGAI PAKTLPARHRVELEPIKPETLQLATDLPYGLAVAAFRWPGSKSPDFAAAQVLADVLGSERGGLRDLVPRGQALSASFSFD SFQEATLAYAQAAFPAGGDGAGLLRQVREVLAGIAKNGVAEELIDAAKRHETADAEFKKNSIADLAMFWSEAVALEGRQS PSDDIEAIQKVTADDVRRVARRLLSPEESMSAILRPQASGKPVSTSSFGKPESFASPDKPAAPLPEWAQKVNQLSIPVSN VHPQITTLSNGLRLIVQPVTASDTVSVFGRVQNIGLKDSKGQEGVDEVLDELLSYGTVSLDRAGFQKALDDIGANENAGA DFSLEVPASEFDRGVALLAENQLHPALPASAFKTVQRQFAERMAGEGQSAAYLAEHTLESALLPKNDPDLRHATSRSVSS LSLKDVRNYYKRAFQPDLTTIVVVGNITPERAREVIERNFGSWKSHGSRRRAVPPAVAANQPSSTEVPNDSRVQADVTLA ETLPVPRTDPDYYTLNLGSQVLGGAFYASRLSRDLRENSGLVYSVSSSLEAESTRAFYVISYGCDPRNVAKVRAIVQRDL KEMQTTAVPEETLKQAKVLLLKQVPLSEASVRSIAEGLISSAVNGLPLNEPIVAANMYAKVTAEQVQAAFAKWIRPNDFV EVIEGPSAK
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=315, Percent_Identity=25.0793650793651, Blast_Score=74, Evalue=5e-13, Organism=Escherichia coli, GI1787770, Length=253, Percent_Identity=27.6679841897233, Blast_Score=77, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71999683, Length=437, Percent_Identity=23.3409610983982, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 95705; Mature: 95705
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATTRRFLSRAFLGAVAVCGLVLTAAPKPVQEVSRATLDNGLRVVIVRNSLAPVVTTVM CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH NYLVGSNDAPEGFPGTAHALEHMMFRGSPELSADQLANIAAAMGGDFNADTQQSITRYFF HHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH TVPKQDLEVALHIESIRMGDLLASDALWEHERGAIEQEVAGDVSDPEYVLYTKLLSAMFR HCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH GTAYEHDALGTRASFDATTGGMLKKFYESWYAPNNAILVICGDVDAAATMATVKDLFGAI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCC PAKTLPARHRVELEPIKPETLQLATDLPYGLAVAAFRWPGSKSPDFAAAQVLADVLGSER CCCCCCCCCCEEECCCCCHHHHHHHCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHCCCC GGLRDLVPRGQALSASFSFDSFQEATLAYAQAAFPAGGDGAGLLRQVREVLAGIAKNGVA CCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHH EELIDAAKRHETADAEFKKNSIADLAMFWSEAVALEGRQSPSDDIEAIQKVTADDVRRVA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RRLLSPEESMSAILRPQASGKPVSTSSFGKPESFASPDKPAAPLPEWAQKVNQLSIPVSN HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH VHPQITTLSNGLRLIVQPVTASDTVSVFGRVQNIGLKDSKGQEGVDEVLDELLSYGTVSL CCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHH DRAGFQKALDDIGANENAGADFSLEVPASEFDRGVALLAENQLHPALPASAFKTVQRQFA HHHHHHHHHHHCCCCCCCCCCEEEECCHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH ERMAGEGQSAAYLAEHTLESALLPKNDPDLRHATSRSVSSLSLKDVRNYYKRAFQPDLTT HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE IVVVGNITPERAREVIERNFGSWKSHGSRRRAVPPAVAANQPSSTEVPNDSRVQADVTLA EEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHH ETLPVPRTDPDYYTLNLGSQVLGGAFYASRLSRDLRENSGLVYSVSSSLEAESTRAFYVI HHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEE SYGCDPRNVAKVRAIVQRDLKEMQTTAVPEETLKQAKVLLLKQVPLSEASVRSIAEGLIS EECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SAVNGLPLNEPIVAANMYAKVTAEQVQAAFAKWIRPNDFVEVIEGPSAK HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC >Mature Secondary Structure MIATTRRFLSRAFLGAVAVCGLVLTAAPKPVQEVSRATLDNGLRVVIVRNSLAPVVTTVM CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH NYLVGSNDAPEGFPGTAHALEHMMFRGSPELSADQLANIAAAMGGDFNADTQQSITRYFF HHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH TVPKQDLEVALHIESIRMGDLLASDALWEHERGAIEQEVAGDVSDPEYVLYTKLLSAMFR HCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH GTAYEHDALGTRASFDATTGGMLKKFYESWYAPNNAILVICGDVDAAATMATVKDLFGAI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCC PAKTLPARHRVELEPIKPETLQLATDLPYGLAVAAFRWPGSKSPDFAAAQVLADVLGSER CCCCCCCCCCEEECCCCCHHHHHHHCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHCCCC GGLRDLVPRGQALSASFSFDSFQEATLAYAQAAFPAGGDGAGLLRQVREVLAGIAKNGVA CCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHH EELIDAAKRHETADAEFKKNSIADLAMFWSEAVALEGRQSPSDDIEAIQKVTADDVRRVA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RRLLSPEESMSAILRPQASGKPVSTSSFGKPESFASPDKPAAPLPEWAQKVNQLSIPVSN HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH VHPQITTLSNGLRLIVQPVTASDTVSVFGRVQNIGLKDSKGQEGVDEVLDELLSYGTVSL CCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHH DRAGFQKALDDIGANENAGADFSLEVPASEFDRGVALLAENQLHPALPASAFKTVQRQFA HHHHHHHHHHHCCCCCCCCCCEEEECCHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH ERMAGEGQSAAYLAEHTLESALLPKNDPDLRHATSRSVSSLSLKDVRNYYKRAFQPDLTT HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE IVVVGNITPERAREVIERNFGSWKSHGSRRRAVPPAVAANQPSSTEVPNDSRVQADVTLA EEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHH ETLPVPRTDPDYYTLNLGSQVLGGAFYASRLSRDLRENSGLVYSVSSSLEAESTRAFYVI HHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEE SYGCDPRNVAKVRAIVQRDLKEMQTTAVPEETLKQAKVLLLKQVPLSEASVRSIAEGLIS EECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SAVNGLPLNEPIVAANMYAKVTAEQVQAAFAKWIRPNDFVEVIEGPSAK HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]