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The map label for this gene is prpC [H]

Identifier: 116620433

GI number: 116620433

Start: 1621061

End: 1621783

Strand: Direct

Name: prpC [H]

Synonym: Acid_1311

Alternate gene names: 116620433

Gene position: 1621061-1621783 (Clockwise)

Preceding gene: 116620430

Following gene: 116620434

Centisome position: 16.27

GC content: 64.04

Gene sequence:

>723_bases
ATGCTGGAAGCATTCTCGCTCTCGGATAAGGGTTGCGTAAGGGCTAACAATGAGGATTACTGCCTGATCGATGCGGAGCG
TGGGCTTTACGTGCTCGCCGATGGCATGGGCGGCGCCAAAGCCGGCGAACAGGCCTCCCGCATTGCAGTGGAAACCGTGG
CCCAGACCGTCCGCAAGGCGCCCACGCTCGACTCGCAAGTGTTAATCTTCGCCGCGGAAGAGGCCAACCGGCGCGTGCTG
GAAGCCGCTCACAACGATCCCAGCCTCGAGGGCATGGGCACTACCCTGGTGGCAGCGCTCGAATTGGACAACGAACTGGC
CATCGCCAGCGTAGGCGATAGTCGCGCTTACGTCCTGGACGAAGCCGGACTACGCGCCATCACCGACGACCAGACGTGGG
TCAACGAGGTCGGCCGTCCGCTCGGGCTGGACGAGGAAAGCCTGCGCAATCACCCGATGCGCCACGTGCTCACGATGGCG
ATCGGCGCCAGCGCTCCGCTCACCATCAATCACTACCGCGTGCGGCTCACCCCCGGCAGCCTGGTGCTGATCTGCAGCGA
CGGCCTGCACGGAGTGCTCGAGGCGCCGGAGATGGAGGCGATCCTCAAAGGCGGCCGCAACGGCGATACGCTCGAGGAAA
GCTGCCACCATCTCATCGATGCCGCCAAGCACGCCGGCGGCCCGGACAACGTTACGGCCGTCCTGATGAGAAAAATCGGA
TAA

Upstream 100 bases:

>100_bases
GTCGTTTCCAGGGTAATAAGATGGCCATCAAGAGTAACTTCTGTTTATTTTACCGCCATCGCCGGCCGTGTTACAGTGAC
GTACGGACGGACTCGTGCAC

Downstream 100 bases:

>100_bases
TTCCACAGCCCCGCCGCCACTTTAGAGTTATCAGGCAGATTTTCTTCGGAGTTGCCGCTACGTCACTGGTACTGGCGGCC
ATGGCGTTTGCTCAAGTCGC

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLEAFSLSDKGCVRANNEDYCLIDAERGLYVLADGMGGAKAGEQASRIAVETVAQTVRKAPTLDSQVLIFAAEEANRRVL
EAAHNDPSLEGMGTTLVAALELDNELAIASVGDSRAYVLDEAGLRAITDDQTWVNEVGRPLGLDEESLRNHPMRHVLTMA
IGASAPLTINHYRVRLTPGSLVLICSDGLHGVLEAPEMEAILKGGRNGDTLEESCHHLIDAAKHAGGPDNVTAVLMRKIG

Sequences:

>Translated_240_residues
MLEAFSLSDKGCVRANNEDYCLIDAERGLYVLADGMGGAKAGEQASRIAVETVAQTVRKAPTLDSQVLIFAAEEANRRVL
EAAHNDPSLEGMGTTLVAALELDNELAIASVGDSRAYVLDEAGLRAITDDQTWVNEVGRPLGLDEESLRNHPMRHVLTMA
IGASAPLTINHYRVRLTPGSLVLICSDGLHGVLEAPEMEAILKGGRNGDTLEESCHHLIDAAKHAGGPDNVTAVLMRKIG
>Mature_240_residues
MLEAFSLSDKGCVRANNEDYCLIDAERGLYVLADGMGGAKAGEQASRIAVETVAQTVRKAPTLDSQVLIFAAEEANRRVL
EAAHNDPSLEGMGTTLVAALELDNELAIASVGDSRAYVLDEAGLRAITDDQTWVNEVGRPLGLDEESLRNHPMRHVLTMA
IGASAPLTINHYRVRLTPGSLVLICSDGLHGVLEAPEMEAILKGGRNGDTLEESCHHLIDAAKHAGGPDNVTAVLMRKIG

Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in

COG id: COG0631

COG function: function code T; Serine/threonine protein phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015655
- InterPro:   IPR001932
- InterPro:   IPR014045 [H]

Pfam domain/function: PF00481 PP2C [H]

EC number: =3.1.3.16 [H]

Molecular weight: Translated: 25573; Mature: 25573

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEAFSLSDKGCVRANNEDYCLIDAERGLYVLADGMGGAKAGEQASRIAVETVAQTVRKA
CCCCCCCCCCCCEECCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
PTLDSQVLIFAAEEANRRVLEAAHNDPSLEGMGTTLVAALELDNELAIASVGDSRAYVLD
CCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEE
EAGLRAITDDQTWVNEVGRPLGLDEESLRNHPMRHVLTMAIGASAPLTINHYRVRLTPGS
CCCCEEECCCHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEECCCC
LVLICSDGLHGVLEAPEMEAILKGGRNGDTLEESCHHLIDAAKHAGGPDNVTAVLMRKIG
EEEEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLEAFSLSDKGCVRANNEDYCLIDAERGLYVLADGMGGAKAGEQASRIAVETVAQTVRKA
CCCCCCCCCCCCEECCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
PTLDSQVLIFAAEEANRRVLEAAHNDPSLEGMGTTLVAALELDNELAIASVGDSRAYVLD
CCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEE
EAGLRAITDDQTWVNEVGRPLGLDEESLRNHPMRHVLTMAIGASAPLTINHYRVRLTPGS
CCCCEEECCCHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEECCCC
LVLICSDGLHGVLEAPEMEAILKGGRNGDTLEESCHHLIDAAKHAGGPDNVTAVLMRKIG
EEEEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]