| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620365
Identifier: 116620365
GI number: 116620365
Start: 1535769
End: 1537763
Strand: Reverse
Name: 116620365
Synonym: Acid_1242
Alternate gene names: NA
Gene position: 1537763-1535769 (Counterclockwise)
Preceding gene: 116620372
Following gene: 116620357
Centisome position: 15.43
GC content: 62.36
Gene sequence:
>1995_bases ATGAAGCTTACCCGCCGTAATTTCGCCGCGCTTGTCGCCGCATCCACGCTTGACGCTCAGCAGCAGCCCGCGGCCGCGCC GAATCCCGATACTAGTGTCCAGCCTCCGCAACAAAAGCGTCAGGGCACAGTCGATGGCATCCTTCCTTTTAAAGAAATTC AATTCACCCGTAACAAGTTCGCTCCCGCCCTCCAGCCCTTCCCCATGTCGCAGGTCCGCCTCCTGCCCGGACCCTTCCTT GATGCCGCCGAGTGGAATCGCGGCTACATGAACCGCCTGCCCGCCGACCGCCTGCTCCACGCCTTCCGACTCAACGCGGG CTTGCCCTCCAGCGCGCAGCCTCTCGGCGGCTGGGAGATCTATGTCGAGCCCACGCCCGGCAAGCGCATCAACAGCGAAG GCGAACTGCGCGGCCACTTCGTGGGACACTTTCTCTCCGCCAGCGCGCAGCTCTACGCCTCAATGGGCGATAAGGACGCC AAGGCCAAAGCCGACTATATCGTCGCCGAACTGGCCAAGTGCCAGCAGAAACTCGGCCCCAGCGGCTACCTCTCCGCCTT CCCCATCGAATGGTTCGACCGCCTCGACGCGCGCAAGCCCGTCTGGGCGCCCTTTTATACCATTCACAAGATCATGGCCG GCATGTTCGACATGTACACGCTCGCCGGGAACCAGCAGGCCCTCCAGGTGCTCGAAGGCATGTCCAATTGGGCCGACGAG TGGACCGCGTCGAAATCCGAGGCGCACATGCAGGACATCCTGCGCACCGAATACGGCGGCATGAACGAGGTCCTCTACAA CCTCGCCGCCGTCACCGGCAACGATCGCTGGGCCAAGGCCGGCGACCGCTTCACCAAGAAGGAATTTTTCAACCCGCTCG CCCTGCGCAACGATGCCCTCACCGGACTCCACGTCAACACGCATATCCCGCAGGTCATCGGCGCCGCCGCGCGTTATGAA ATCTCCAGCGATATGCGCTTCCACGACGTCGCCGATTACTTCTGGTACGAAGTGGTCACCGCCCGCAGCTATGTCACCGA AGGCACCAGCAACGGCGAGGGCTGGCTCACGCAGCCGCGCATGCTCGCAGCCGAGCTCAAGCGCAGTGTCGCCACCGCCG AGTGCTGCTGCAGCTACAACATGCTCAAGCTCACGCGGCACCTCTACGGTTGGAAGCCCGACCCCGCCTACTTCGATTAC TACGAGCGCGCGCTCTTCAATCACCGCCTCGGCACCATACAGCCCAAGACCGGCTACACGCAGTATTATCTTTCCCTCAC CCCCGGCGCCTGGAAGACCTTCAACACCGAGGACAAATCCTTCTGGTGTTGCACCGGCAGCGGCGTGGAGGAATATTCCA AGCTCAACGACAGCATCTACTGGCACGATGCCGAAGGTCTCACGGTCAATCTCTTCATCCCCTCGGAACTCAACTGGGAA GAGAAGGGCTTCAGGCTCCGCCAGGAAACCAAATTCCCCGAGCAGCAATCCACCACTCTCACGGTCACCGCCGCCAAATC CGCGCCGATGGCGATGCGCCTGCGCATCCCCGCGTGGACCAAATCCGCCGCCGTCAAAATCAACGGCCGAGCCGTCGATG TCACACCGACCCCCGGCAGCTATCTCACCCTTACCCGACCCTGGAAGGCCGGCGACAAAATCGAGATGACTCTTCCCATG CATCTCTCGGTCGAGTACATGCCCGATGACCCGAAGACCCAGGCATTCCTCTACGGTCCCATCGTCCTCGCCGGCGATCT CGGCGCGGAAGGCCTCACGGACCAGATGATCGTCGGCCCGAACGCCCCGCAAATGCGCCGCGTACCCATCGAAGTCCCGA CCTTCACCTCGAACGGCGCCGAACCGTCGTCCTGGATCAAACCAGCCGGCGCGCCACTCACCTTCCGTACCACAGGGCAG CAGAAGGACGTCACTCTCGTCCCCCTCAACAGCCTTTTCGGCAAACGCTACTCCGTCTACTGGCAGGTGAGTTGA
Upstream 100 bases:
>100_bases CCTCTCCGGTGCAAGTTGCATCCATCATATAACGACTCGCCTGTGCAATGGGTCATGCTCGGTGGCATAATGTAAGCGAT TTCTTTCCAGAGGTACCGCC
Downstream 100 bases:
>100_bases CCCTACTTCGACGGATCGTCCGGGCTCCTCACCGGAGCCAGCTTGGGGTCGGTGCTAGTCGCCAGCCAGTCGGCCAGCAG CCCCTGCATATCGGCACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 664; Mature: 664
Protein sequence:
>664_residues MKLTRRNFAALVAASTLDAQQQPAAAPNPDTSVQPPQQKRQGTVDGILPFKEIQFTRNKFAPALQPFPMSQVRLLPGPFL DAAEWNRGYMNRLPADRLLHAFRLNAGLPSSAQPLGGWEIYVEPTPGKRINSEGELRGHFVGHFLSASAQLYASMGDKDA KAKADYIVAELAKCQQKLGPSGYLSAFPIEWFDRLDARKPVWAPFYTIHKIMAGMFDMYTLAGNQQALQVLEGMSNWADE WTASKSEAHMQDILRTEYGGMNEVLYNLAAVTGNDRWAKAGDRFTKKEFFNPLALRNDALTGLHVNTHIPQVIGAAARYE ISSDMRFHDVADYFWYEVVTARSYVTEGTSNGEGWLTQPRMLAAELKRSVATAECCCSYNMLKLTRHLYGWKPDPAYFDY YERALFNHRLGTIQPKTGYTQYYLSLTPGAWKTFNTEDKSFWCCTGSGVEEYSKLNDSIYWHDAEGLTVNLFIPSELNWE EKGFRLRQETKFPEQQSTTLTVTAAKSAPMAMRLRIPAWTKSAAVKINGRAVDVTPTPGSYLTLTRPWKAGDKIEMTLPM HLSVEYMPDDPKTQAFLYGPIVLAGDLGAEGLTDQMIVGPNAPQMRRVPIEVPTFTSNGAEPSSWIKPAGAPLTFRTTGQ QKDVTLVPLNSLFGKRYSVYWQVS
Sequences:
>Translated_664_residues MKLTRRNFAALVAASTLDAQQQPAAAPNPDTSVQPPQQKRQGTVDGILPFKEIQFTRNKFAPALQPFPMSQVRLLPGPFL DAAEWNRGYMNRLPADRLLHAFRLNAGLPSSAQPLGGWEIYVEPTPGKRINSEGELRGHFVGHFLSASAQLYASMGDKDA KAKADYIVAELAKCQQKLGPSGYLSAFPIEWFDRLDARKPVWAPFYTIHKIMAGMFDMYTLAGNQQALQVLEGMSNWADE WTASKSEAHMQDILRTEYGGMNEVLYNLAAVTGNDRWAKAGDRFTKKEFFNPLALRNDALTGLHVNTHIPQVIGAAARYE ISSDMRFHDVADYFWYEVVTARSYVTEGTSNGEGWLTQPRMLAAELKRSVATAECCCSYNMLKLTRHLYGWKPDPAYFDY YERALFNHRLGTIQPKTGYTQYYLSLTPGAWKTFNTEDKSFWCCTGSGVEEYSKLNDSIYWHDAEGLTVNLFIPSELNWE EKGFRLRQETKFPEQQSTTLTVTAAKSAPMAMRLRIPAWTKSAAVKINGRAVDVTPTPGSYLTLTRPWKAGDKIEMTLPM HLSVEYMPDDPKTQAFLYGPIVLAGDLGAEGLTDQMIVGPNAPQMRRVPIEVPTFTSNGAEPSSWIKPAGAPLTFRTTGQ QKDVTLVPLNSLFGKRYSVYWQVS >Mature_664_residues MKLTRRNFAALVAASTLDAQQQPAAAPNPDTSVQPPQQKRQGTVDGILPFKEIQFTRNKFAPALQPFPMSQVRLLPGPFL DAAEWNRGYMNRLPADRLLHAFRLNAGLPSSAQPLGGWEIYVEPTPGKRINSEGELRGHFVGHFLSASAQLYASMGDKDA KAKADYIVAELAKCQQKLGPSGYLSAFPIEWFDRLDARKPVWAPFYTIHKIMAGMFDMYTLAGNQQALQVLEGMSNWADE WTASKSEAHMQDILRTEYGGMNEVLYNLAAVTGNDRWAKAGDRFTKKEFFNPLALRNDALTGLHVNTHIPQVIGAAARYE ISSDMRFHDVADYFWYEVVTARSYVTEGTSNGEGWLTQPRMLAAELKRSVATAECCCSYNMLKLTRHLYGWKPDPAYFDY YERALFNHRLGTIQPKTGYTQYYLSLTPGAWKTFNTEDKSFWCCTGSGVEEYSKLNDSIYWHDAEGLTVNLFIPSELNWE EKGFRLRQETKFPEQQSTTLTVTAAKSAPMAMRLRIPAWTKSAAVKINGRAVDVTPTPGSYLTLTRPWKAGDKIEMTLPM HLSVEYMPDDPKTQAFLYGPIVLAGDLGAEGLTDQMIVGPNAPQMRRVPIEVPTFTSNGAEPSSWIKPAGAPLTFRTTGQ QKDVTLVPLNSLFGKRYSVYWQVS
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74395; Mature: 74395
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTRRNFAALVAASTLDAQQQPAAAPNPDTSVQPPQQKRQGTVDGILPFKEIQFTRNKF CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHC APALQPFPMSQVRLLPGPFLDAAEWNRGYMNRLPADRLLHAFRLNAGLPSSAQPLGGWEI CCCCCCCCCCCEEECCCCCCCHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE YVEPTPGKRINSEGELRGHFVGHFLSASAQLYASMGDKDAKAKADYIVAELAKCQQKLGP EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC SGYLSAFPIEWFDRLDARKPVWAPFYTIHKIMAGMFDMYTLAGNQQALQVLEGMSNWADE CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH WTASKSEAHMQDILRTEYGGMNEVLYNLAAVTGNDRWAKAGDRFTKKEFFNPLALRNDAL HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCCHHCCCCCC TGLHVNTHIPQVIGAAARYEISSDMRFHDVADYFWYEVVTARSYVTEGTSNGEGWLTQPR EEEEECCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH MLAAELKRSVATAECCCSYNMLKLTRHLYGWKPDPAYFDYYERALFNHRLGTIQPKTGYT HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE QYYLSLTPGAWKTFNTEDKSFWCCTGSGVEEYSKLNDSIYWHDAEGLTVNLFIPSELNWE EEEEEECCCCCEECCCCCCEEEEEECCCHHHHHHCCCCEEEECCCCCEEEEEECCCCCCC EKGFRLRQETKFPEQQSTTLTVTAAKSAPMAMRLRIPAWTKSAAVKINGRAVDVTPTPGS HHCCEEHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEECCCCCC YLTLTRPWKAGDKIEMTLPMHLSVEYMPDDPKTQAFLYGPIVLAGDLGAEGLTDQMIVGP EEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECEEEEECCCCCCCCCCEEECC NAPQMRRVPIEVPTFTSNGAEPSSWIKPAGAPLTFRTTGQQKDVTLVPLNSLFGKRYSVY CCCCCEECCEECCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCEEEEECHHHCCCEEEEE WQVS EEEC >Mature Secondary Structure MKLTRRNFAALVAASTLDAQQQPAAAPNPDTSVQPPQQKRQGTVDGILPFKEIQFTRNKF CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHC APALQPFPMSQVRLLPGPFLDAAEWNRGYMNRLPADRLLHAFRLNAGLPSSAQPLGGWEI CCCCCCCCCCCEEECCCCCCCHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE YVEPTPGKRINSEGELRGHFVGHFLSASAQLYASMGDKDAKAKADYIVAELAKCQQKLGP EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC SGYLSAFPIEWFDRLDARKPVWAPFYTIHKIMAGMFDMYTLAGNQQALQVLEGMSNWADE CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH WTASKSEAHMQDILRTEYGGMNEVLYNLAAVTGNDRWAKAGDRFTKKEFFNPLALRNDAL HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCCHHCCCCCC TGLHVNTHIPQVIGAAARYEISSDMRFHDVADYFWYEVVTARSYVTEGTSNGEGWLTQPR EEEEECCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH MLAAELKRSVATAECCCSYNMLKLTRHLYGWKPDPAYFDYYERALFNHRLGTIQPKTGYT HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE QYYLSLTPGAWKTFNTEDKSFWCCTGSGVEEYSKLNDSIYWHDAEGLTVNLFIPSELNWE EEEEEECCCCCEECCCCCCEEEEEECCCHHHHHHCCCCEEEECCCCCEEEEEECCCCCCC EKGFRLRQETKFPEQQSTTLTVTAAKSAPMAMRLRIPAWTKSAAVKINGRAVDVTPTPGS HHCCEEHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEECCCCCC YLTLTRPWKAGDKIEMTLPMHLSVEYMPDDPKTQAFLYGPIVLAGDLGAEGLTDQMIVGP EEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECEEEEECCCCCCCCCCEEECC NAPQMRRVPIEVPTFTSNGAEPSSWIKPAGAPLTFRTTGQQKDVTLVPLNSLFGKRYSVY CCCCCEECCEECCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCEEEEECHHHCCCEEEEE WQVS EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA