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The map label for this gene is yidJ [C]

Identifier: 116620364

GI number: 116620364

Start: 1534363

End: 1535766

Strand: Direct

Name: yidJ [C]

Synonym: Acid_1241

Alternate gene names: 116620364

Gene position: 1534363-1535766 (Clockwise)

Preceding gene: 116620363

Following gene: 116620366

Centisome position: 15.4

GC content: 62.82

Gene sequence:

>1404_bases
ATGGCTACCCGGCGGCAGTTCCTGGCCACCGCGGCCGGCGCGGCCATGCATGGTCTGGCCGCGCCCGACACCAGGTGGAA
TCTGCTGGTGATCACCAATGACCAGCATCGTGCCGATTGCCTGGGTTGCTACGGCAACCCGGTGATCCGGACGCCGAATA
CGGATCGACTGGCCGGCGAGGGCGTGCGCTTCGGGAACGCCTTCGTGCACGCGCCGCAGTGCGTACCGTCGCGTGTCAGC
CTGCATACCGGCCGGTATCCGCACGTGCATCGCGTGCCCACCAATTCCTACGACCTGCCGGAGAGCGAGCAGACTCTCGC
CAAAGTGCTCAACGCGAACGGCTATCGCACGGCCTGCGTGGGCGAAATGCCGTTCGCTCCGCGAGCCTATACAGGCGGGT
TCCAGCAGGTGCTGGCCAGCAATAGAGAATACGATCAGTTTCTGGCTGGACACGGCCTCAAGTTCCCCAAATCGGATGGC
CCGTTTCAGGCCGCGCCCGTGCCCTGGACCGACGATCTCGACGAGACCGCATTCTTCGCCGGTCACGCCCGAGACTTTCT
CAAGGCCAATCGCGACCGGCCCTTCTTCCTGGATATCAACTTTCGGAGGCCGCATCATCCATTCAATCCGCCGGCGCCGT
TCGACAAGATGTACCTGGGGGCAGCGTTTCCGCCTTCCCACGCGCGTCCCGGGGAGATGGCCAACAAGCCGCCGCAGCAG
AAGGCGGCGCTCGAAAACAGCGTCGGCTTCGACCTGCGCAGCATGACTCCGGCCGATTTGGATCGCGTGAAGGCCTATTA
CTACGGGATGATCAGTGAGAACGACAAGTACATCGGCACCGTGCTGGACGAACTGAAATCGCAGGGGCTCGAGGATCGGA
CGGTAGTGGTGTTCAATGCCGATCACGGCGAGATGCTCGGCGATCACGGGCTGCTCTTCAAGGGCTCGTACATGTACGAT
GGCGTGACACAGGTGCCGCTGATTCTGCGCGCGCCCGGCAAGCTACCGGCGCGCACCGTGGTGGATGGGCTGGTGGAGGA
AGTGGACGTGATGCCCACACTACTGGAACTGTTGGGTATCGATGTACCCGCCGGCGTACAGGGGAAATCGCTGGTGCCAC
TGGCGGACAATCCCAAGGCCCGGCACAAGGACGCGGTCTTCGCGGAGTTTCCCACCATCAAGATGGCGCGGACGCGGGAG
TGGAAGCTGGTTCACTACAACAAGGCCAAATACGGCGAGTTGTATCACCTCACGGAAGATCCTCACGAATTGACGAATCT
CTACGACGATCCGAAGTACGCACCCGCGAGTGCCGATATGCAGGGGCTGCTGGCCGACTGGCTGGCGACTAGCACCGACC
CCAAGCTGGCTCCGGTGAGGAGCCCGGACGATCCGTCGAAGTAG

Upstream 100 bases:

>100_bases
ATCCGAGTCTGACCATCTCCACTCCAACGACGGTCGGGACGATCACGAGCGTGTTGCGTCCCATGCGCGAAGTGCAGTTC
GTGGCGAGGTTCAGCTTCTG

Downstream 100 bases:

>100_bases
GGTCAACTCACCTGCCAGTAGACGGAGTAGCGTTTGCCGAAAAGGCTGTTGAGGGGGACGAGAGTGACGTCCTTCTGCTG
CCCTGTGGTACGGAAGGTGA

Product: sulfatase

Products: NA

Alternate protein names: Cys-type sulfatase [H]

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MATRRQFLATAAGAAMHGLAAPDTRWNLLVITNDQHRADCLGCYGNPVIRTPNTDRLAGEGVRFGNAFVHAPQCVPSRVS
LHTGRYPHVHRVPTNSYDLPESEQTLAKVLNANGYRTACVGEMPFAPRAYTGGFQQVLASNREYDQFLAGHGLKFPKSDG
PFQAAPVPWTDDLDETAFFAGHARDFLKANRDRPFFLDINFRRPHHPFNPPAPFDKMYLGAAFPPSHARPGEMANKPPQQ
KAALENSVGFDLRSMTPADLDRVKAYYYGMISENDKYIGTVLDELKSQGLEDRTVVVFNADHGEMLGDHGLLFKGSYMYD
GVTQVPLILRAPGKLPARTVVDGLVEEVDVMPTLLELLGIDVPAGVQGKSLVPLADNPKARHKDAVFAEFPTIKMARTRE
WKLVHYNKAKYGELYHLTEDPHELTNLYDDPKYAPASADMQGLLADWLATSTDPKLAPVRSPDDPSK

Sequences:

>Translated_467_residues
MATRRQFLATAAGAAMHGLAAPDTRWNLLVITNDQHRADCLGCYGNPVIRTPNTDRLAGEGVRFGNAFVHAPQCVPSRVS
LHTGRYPHVHRVPTNSYDLPESEQTLAKVLNANGYRTACVGEMPFAPRAYTGGFQQVLASNREYDQFLAGHGLKFPKSDG
PFQAAPVPWTDDLDETAFFAGHARDFLKANRDRPFFLDINFRRPHHPFNPPAPFDKMYLGAAFPPSHARPGEMANKPPQQ
KAALENSVGFDLRSMTPADLDRVKAYYYGMISENDKYIGTVLDELKSQGLEDRTVVVFNADHGEMLGDHGLLFKGSYMYD
GVTQVPLILRAPGKLPARTVVDGLVEEVDVMPTLLELLGIDVPAGVQGKSLVPLADNPKARHKDAVFAEFPTIKMARTRE
WKLVHYNKAKYGELYHLTEDPHELTNLYDDPKYAPASADMQGLLADWLATSTDPKLAPVRSPDDPSK
>Mature_466_residues
ATRRQFLATAAGAAMHGLAAPDTRWNLLVITNDQHRADCLGCYGNPVIRTPNTDRLAGEGVRFGNAFVHAPQCVPSRVSL
HTGRYPHVHRVPTNSYDLPESEQTLAKVLNANGYRTACVGEMPFAPRAYTGGFQQVLASNREYDQFLAGHGLKFPKSDGP
FQAAPVPWTDDLDETAFFAGHARDFLKANRDRPFFLDINFRRPHHPFNPPAPFDKMYLGAAFPPSHARPGEMANKPPQQK
AALENSVGFDLRSMTPADLDRVKAYYYGMISENDKYIGTVLDELKSQGLEDRTVVVFNADHGEMLGDHGLLFKGSYMYDG
VTQVPLILRAPGKLPARTVVDGLVEEVDVMPTLLELLGIDVPAGVQGKSLVPLADNPKARHKDAVFAEFPTIKMARTREW
KLVHYNKAKYGELYHLTEDPHELTNLYDDPKYAPASADMQGLLADWLATSTDPKLAPVRSPDDPSK

Specific function: Has sulfatase activity toward para-nitrophenyl sulfate, which is increased in presence of calcium ion [H]

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI39930577, Length=434, Percent_Identity=24.4239631336406, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI4557659, Length=415, Percent_Identity=29.1566265060241, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI240255483, Length=368, Percent_Identity=26.6304347826087, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI29789100, Length=368, Percent_Identity=26.6304347826087, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI240255478, Length=368, Percent_Identity=26.6304347826087, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI189571643, Length=378, Percent_Identity=26.7195767195767, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI189571641, Length=378, Percent_Identity=26.7195767195767, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI189571638, Length=378, Percent_Identity=26.7195767195767, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI189571636, Length=378, Percent_Identity=26.7195767195767, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI5360208, Length=333, Percent_Identity=27.9279279279279, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI146229331, Length=403, Percent_Identity=28.5359801488834, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI146229329, Length=403, Percent_Identity=28.5359801488834, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI6005990, Length=403, Percent_Identity=28.5359801488834, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI146229324, Length=403, Percent_Identity=28.5359801488834, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI31742482, Length=431, Percent_Identity=25.9860788863109, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4503899, Length=419, Percent_Identity=26.0143198090692, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4504061, Length=478, Percent_Identity=25.1046025104602, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI71852586, Length=107, Percent_Identity=40.1869158878505, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI71852584, Length=107, Percent_Identity=40.1869158878505, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI53831991, Length=110, Percent_Identity=39.0909090909091, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI262118210, Length=315, Percent_Identity=26.984126984127, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI58743319, Length=108, Percent_Identity=39.8148148148148, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI157266309, Length=110, Percent_Identity=38.1818181818182, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1790112, Length=450, Percent_Identity=28.6666666666667, Blast_Score=171, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17568795, Length=343, Percent_Identity=26.8221574344023, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24647401, Length=374, Percent_Identity=25.9358288770053, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24656835, Length=404, Percent_Identity=25.990099009901, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21356831, Length=485, Percent_Identity=24.9484536082474, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI281366397, Length=316, Percent_Identity=25.6329113924051, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281366395, Length=316, Percent_Identity=25.6329113924051, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24666163, Length=316, Percent_Identity=25.6329113924051, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24653364, Length=376, Percent_Identity=25, Blast_Score=79, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: =3.1.6.1 [H]

Molecular weight: Translated: 51691; Mature: 51560

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRRQFLATAAGAAMHGLAAPDTRWNLLVITNDQHRADCLGCYGNPVIRTPNTDRLAGE
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEECCCCCCCCCC
GVRFGNAFVHAPQCVPSRVSLHTGRYPHVHRVPTNSYDLPESEQTLAKVLNANGYRTACV
CEEECCEEEECCCCCCCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEE
GEMPFAPRAYTGGFQQVLASNREYDQFLAGHGLKFPKSDGPFQAAPVPWTDDLDETAFFA
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
GHARDFLKANRDRPFFLDINFRRPHHPFNPPAPFDKMYLGAAFPPSHARPGEMANKPPQQ
HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCHH
KAALENSVGFDLRSMTPADLDRVKAYYYGMISENDKYIGTVLDELKSQGLEDRTVVVFNA
HHHHHHHCCCCHHCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEC
DHGEMLGDHGLLFKGSYMYDGVTQVPLILRAPGKLPARTVVDGLVEEVDVMPTLLELLGI
CCCCCCCCCCEEEECCEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DVPAGVQGKSLVPLADNPKARHKDAVFAEFPTIKMARTREWKLVHYNKAKYGELYHLTED
CCCCCCCCCEEECCCCCCCCCCCCCEEEECCCEEEECCCCEEEEEECCCCCCEEEECCCC
PHELTNLYDDPKYAPASADMQGLLADWLATSTDPKLAPVRSPDDPSK
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATRRQFLATAAGAAMHGLAAPDTRWNLLVITNDQHRADCLGCYGNPVIRTPNTDRLAGE
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEECCCCCCCCCC
GVRFGNAFVHAPQCVPSRVSLHTGRYPHVHRVPTNSYDLPESEQTLAKVLNANGYRTACV
CEEECCEEEECCCCCCCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEE
GEMPFAPRAYTGGFQQVLASNREYDQFLAGHGLKFPKSDGPFQAAPVPWTDDLDETAFFA
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
GHARDFLKANRDRPFFLDINFRRPHHPFNPPAPFDKMYLGAAFPPSHARPGEMANKPPQQ
HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCHH
KAALENSVGFDLRSMTPADLDRVKAYYYGMISENDKYIGTVLDELKSQGLEDRTVVVFNA
HHHHHHHCCCCHHCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEC
DHGEMLGDHGLLFKGSYMYDGVTQVPLILRAPGKLPARTVVDGLVEEVDVMPTLLELLGI
CCCCCCCCCCEEEECCEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DVPAGVQGKSLVPLADNPKARHKDAVFAEFPTIKMARTREWKLVHYNKAKYGELYHLTED
CCCCCCCCCEEECCCCCCCCCCCCCEEEECCCEEEECCCCEEEEEECCCCCCEEEECCCC
PHELTNLYDDPKYAPASADMQGLLADWLATSTDPKLAPVRSPDDPSK
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA