| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is sglT [H]
Identifier: 116620356
GI number: 116620356
Start: 1524049
End: 1525773
Strand: Reverse
Name: sglT [H]
Synonym: Acid_1233
Alternate gene names: 116620356
Gene position: 1525773-1524049 (Counterclockwise)
Preceding gene: 116620357
Following gene: 116620355
Centisome position: 15.31
GC content: 61.39
Gene sequence:
>1725_bases ATGCAGGTGCAAGCGATTACAGCATTCTCCCCGGCGTTGCTGCTGCAAGCGCAGCTGATGACGCTCTCCACGGTTGACTT GGCGATCATCGTCCTCTACTTCGCGGCCGTGCTCGGGATTGGCTTCTACCTTAAACGGTTCACCAAGACCGGCGAAGATT TCTTCCTCGCCGGCCGCGAAATGACCGCCTGGATCGCCGGCCTCAGTTTCCTCGCCGCCAACCTCGGCTCGCTCGAGCTC ATGGGCTGGGCCGCCTCCGCCTATCAATACGGCATCCTCGCCACGCACTGGTATTGGATCGGCGCCATCCCCGCGATGCT CTTCCTGGGCATCGTCATGATCCCGTTCTATTACATTTCCAAGACGCACTCCGTCCCCGGCTACCTCAAGCTCCGCTTCG GCGAACCCGCCCGCGCTCTCTCGGCAATCTCCTTTGGGTTGATGACCGTGTTCATGAGCGGCATCAATATGTACTCCATG GCCCTGGTCATGAAGGTCGTGCTCGGCTGGGACATCCACGTCAGCATCTGGATCTCTTCCATTACGGTCATGCTCTACGT CGGCCTCGGCGGCCTGCTCTCCGCCATCTTCAATGAGGTGCTGCAGTTCGTCCTCATCTGGCTCGGCGCGATGCTGATCT CCATCATCGGCCTGATCGAAGCCGGCGGCTGGGACGGCATGGTGGCCAAGATCCACGCCAACTTCCCGCAAGGCGATTAC ACCCACGCCTGGCGCACCCTCGGCTCCTTCAACGACAACCCGATGGGGATCAACTGGGTCGGGATCGTGTTCGGCCTCGG CGCCGTAATCTCCATGGGCTACTGGACCACGGATTTCCTGGTCGTGCAGCGCGTAATCTCCGCCAAAGATCTGCGCGCCG CGAAACTTGCCCCCATCATCGGCGCCGCCTTCAAGATGTGCGTGCCTTTCATCGTCATCCTGCCCGGCCTGCTCGGTCTC GCTGTGCTGCCCGAGCACCTGCTCCCCGAAAGCCAGGCGCTCGCCACCGGCGGCCACAGCTATAACGAAGTGCTGCCGAT CATGCTCGCGCGCTACTGCGGCCCCGGCTTGCTCGGACTCGGCATCACCGCCCTCATCGCCGGCTTCATGAGCGGCATGG CCGGCAACGTCAGCGCCTTCGCCACCGTCTGGACCTACGACGTCTACCGCGCCATGTTCAACAAGAACGCCACCGATTCG CACTATGTCAGCGTGGGCCGCTGGTGCACCTTCTGGGGCGTGCTCGCCTCCATCGGCACCGCGTATATGGTGATGAGTTT CGCCAGCATCATGGATTACGTCCAGGCTCTCTTCAGTTTCTTCATCGCCCCCTTATTCGGCACCGTCATTCTCGGCATGT TGTGGAAGCGCGCCTCCCCCGCCGGCGGCTTCTGGGGCCTTGCGGCCGGCACCGCGAGTTCGATCGGCATGTGGGCCTGG GTGAAAATCGATCACACCGCCATTCAATATGTAGCCATGTCGCCCAACGCAAAGGACATGGCGGAGAATATGTTCCGCGC CCTCTGGTCCTGGCTGGTGTGCGTCATCGTCACCGTCGTTGTCAGCCTCATGACCAAGCCCAAACCCGAAAAGGAACTGG TCAACCTGGTCTATGGCTGCACCGACATTCCGTCGGAAGGCCACCTGCCGGTATGGCAGCGCCCCGCTTTCTGGGCCTGC GTCGTGGGCGCGGTTTTTATCGCTCTGAATATTATTTTCTGGTAG
Upstream 100 bases:
>100_bases GATCGACCCGGAGTTTGTTTTGCGCGATTCCACGGGCCCCGCGCCCGTGCGCTGAGACGCCTAGTGCGTCCTTGACACGA AAGTTGAGGCCCCATACTAT
Downstream 100 bases:
>100_bases TCGGAAAGGCACATACGCAATGAATAACGGCAAGTCCCGTCCTGTTACATTCGGCATGATCGTGGGCAACCGCGGATTCT TCCCGGACCACCTGGCCAAG
Product: SSS family solute/sodium (Na+) symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MQVQAITAFSPALLLQAQLMTLSTVDLAIIVLYFAAVLGIGFYLKRFTKTGEDFFLAGREMTAWIAGLSFLAANLGSLEL MGWAASAYQYGILATHWYWIGAIPAMLFLGIVMIPFYYISKTHSVPGYLKLRFGEPARALSAISFGLMTVFMSGINMYSM ALVMKVVLGWDIHVSIWISSITVMLYVGLGGLLSAIFNEVLQFVLIWLGAMLISIIGLIEAGGWDGMVAKIHANFPQGDY THAWRTLGSFNDNPMGINWVGIVFGLGAVISMGYWTTDFLVVQRVISAKDLRAAKLAPIIGAAFKMCVPFIVILPGLLGL AVLPEHLLPESQALATGGHSYNEVLPIMLARYCGPGLLGLGITALIAGFMSGMAGNVSAFATVWTYDVYRAMFNKNATDS HYVSVGRWCTFWGVLASIGTAYMVMSFASIMDYVQALFSFFIAPLFGTVILGMLWKRASPAGGFWGLAAGTASSIGMWAW VKIDHTAIQYVAMSPNAKDMAENMFRALWSWLVCVIVTVVVSLMTKPKPEKELVNLVYGCTDIPSEGHLPVWQRPAFWAC VVGAVFIALNIIFW
Sequences:
>Translated_574_residues MQVQAITAFSPALLLQAQLMTLSTVDLAIIVLYFAAVLGIGFYLKRFTKTGEDFFLAGREMTAWIAGLSFLAANLGSLEL MGWAASAYQYGILATHWYWIGAIPAMLFLGIVMIPFYYISKTHSVPGYLKLRFGEPARALSAISFGLMTVFMSGINMYSM ALVMKVVLGWDIHVSIWISSITVMLYVGLGGLLSAIFNEVLQFVLIWLGAMLISIIGLIEAGGWDGMVAKIHANFPQGDY THAWRTLGSFNDNPMGINWVGIVFGLGAVISMGYWTTDFLVVQRVISAKDLRAAKLAPIIGAAFKMCVPFIVILPGLLGL AVLPEHLLPESQALATGGHSYNEVLPIMLARYCGPGLLGLGITALIAGFMSGMAGNVSAFATVWTYDVYRAMFNKNATDS HYVSVGRWCTFWGVLASIGTAYMVMSFASIMDYVQALFSFFIAPLFGTVILGMLWKRASPAGGFWGLAAGTASSIGMWAW VKIDHTAIQYVAMSPNAKDMAENMFRALWSWLVCVIVTVVVSLMTKPKPEKELVNLVYGCTDIPSEGHLPVWQRPAFWAC VVGAVFIALNIIFW >Mature_574_residues MQVQAITAFSPALLLQAQLMTLSTVDLAIIVLYFAAVLGIGFYLKRFTKTGEDFFLAGREMTAWIAGLSFLAANLGSLEL MGWAASAYQYGILATHWYWIGAIPAMLFLGIVMIPFYYISKTHSVPGYLKLRFGEPARALSAISFGLMTVFMSGINMYSM ALVMKVVLGWDIHVSIWISSITVMLYVGLGGLLSAIFNEVLQFVLIWLGAMLISIIGLIEAGGWDGMVAKIHANFPQGDY THAWRTLGSFNDNPMGINWVGIVFGLGAVISMGYWTTDFLVVQRVISAKDLRAAKLAPIIGAAFKMCVPFIVILPGLLGL AVLPEHLLPESQALATGGHSYNEVLPIMLARYCGPGLLGLGITALIAGFMSGMAGNVSAFATVWTYDVYRAMFNKNATDS HYVSVGRWCTFWGVLASIGTAYMVMSFASIMDYVQALFSFFIAPLFGTVILGMLWKRASPAGGFWGLAAGTASSIGMWAW VKIDHTAIQYVAMSPNAKDMAENMFRALWSWLVCVIVTVVVSLMTKPKPEKELVNLVYGCTDIPSEGHLPVWQRPAFWAC VVGAVFIALNIIFW
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG4146
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=538, Percent_Identity=27.1375464684015, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI110835708, Length=554, Percent_Identity=28.7003610108303, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI4507031, Length=558, Percent_Identity=26.7025089605735, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI109659836, Length=599, Percent_Identity=26.2103505843072, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI206597483, Length=533, Percent_Identity=28.1425891181989, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI109659839, Length=615, Percent_Identity=26.0162601626016, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI206597487, Length=557, Percent_Identity=26.9299820466786, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI17941285, Length=558, Percent_Identity=26.1648745519713, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI4507033, Length=581, Percent_Identity=24.9569707401033, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI256985183, Length=493, Percent_Identity=25.5578093306288, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI157671931, Length=462, Percent_Identity=23.8095238095238, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI167466278, Length=454, Percent_Identity=26.8722466960352, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI4507035, Length=463, Percent_Identity=23.9740820734341, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI310128183, Length=520, Percent_Identity=24.0384615384615, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1790113, Length=461, Percent_Identity=26.0303687635575, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1787251, Length=398, Percent_Identity=24.1206030150754, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI87082237, Length=377, Percent_Identity=23.6074270557029, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573698, Length=465, Percent_Identity=24.7311827956989, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI24641117, Length=467, Percent_Identity=25.2676659528908, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24651739, Length=518, Percent_Identity=21.042471042471, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI281362918, Length=587, Percent_Identity=22.1465076660988, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI221459584, Length=425, Percent_Identity=23.2941176470588, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24645928, Length=462, Percent_Identity=24.025974025974, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI221459582, Length=442, Percent_Identity=23.5294117647059, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24651741, Length=480, Percent_Identity=20.2083333333333, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI221459586, Length=433, Percent_Identity=23.3256351039261, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI28574994, Length=462, Percent_Identity=21.8614718614719, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI281362054, Length=444, Percent_Identity=22.0720720720721, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362052, Length=444, Percent_Identity=22.0720720720721, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362050, Length=444, Percent_Identity=22.0720720720721, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648056, Length=444, Percent_Identity=22.0720720720721, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI21356827, Length=444, Percent_Identity=22.0720720720721, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI221459588, Length=442, Percent_Identity=23.3031674208145, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650192, Length=379, Percent_Identity=22.4274406332454, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 62640; Mature: 62640
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVQAITAFSPALLLQAQLMTLSTVDLAIIVLYFAAVLGIGFYLKRFTKTGEDFFLAGRE CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHH MTAWIAGLSFLAANLGSLELMGWAASAYQYGILATHWYWIGAIPAMLFLGIVMIPFYYIS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTHSVPGYLKLRFGEPARALSAISFGLMTVFMSGINMYSMALVMKVVLGWDIHVSIWISS HCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ITVMLYVGLGGLLSAIFNEVLQFVLIWLGAMLISIIGLIEAGGWDGMVAKIHANFPQGDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH THAWRTLGSFNDNPMGINWVGIVFGLGAVISMGYWTTDFLVVQRVISAKDLRAAKLAPII HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GAAFKMCVPFIVILPGLLGLAVLPEHLLPESQALATGGHSYNEVLPIMLARYCGPGLLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHH GITALIAGFMSGMAGNVSAFATVWTYDVYRAMFNKNATDSHYVSVGRWCTFWGVLASIGT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AYMVMSFASIMDYVQALFSFFIAPLFGTVILGMLWKRASPAGGFWGLAAGTASSIGMWAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEE VKIDHTAIQYVAMSPNAKDMAENMFRALWSWLVCVIVTVVVSLMTKPKPEKELVNLVYGC EEEEHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC TDIPSEGHLPVWQRPAFWACVVGAVFIALNIIFW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQVQAITAFSPALLLQAQLMTLSTVDLAIIVLYFAAVLGIGFYLKRFTKTGEDFFLAGRE CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHH MTAWIAGLSFLAANLGSLELMGWAASAYQYGILATHWYWIGAIPAMLFLGIVMIPFYYIS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTHSVPGYLKLRFGEPARALSAISFGLMTVFMSGINMYSMALVMKVVLGWDIHVSIWISS HCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ITVMLYVGLGGLLSAIFNEVLQFVLIWLGAMLISIIGLIEAGGWDGMVAKIHANFPQGDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH THAWRTLGSFNDNPMGINWVGIVFGLGAVISMGYWTTDFLVVQRVISAKDLRAAKLAPII HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GAAFKMCVPFIVILPGLLGLAVLPEHLLPESQALATGGHSYNEVLPIMLARYCGPGLLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHH GITALIAGFMSGMAGNVSAFATVWTYDVYRAMFNKNATDSHYVSVGRWCTFWGVLASIGT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AYMVMSFASIMDYVQALFSFFIAPLFGTVILGMLWKRASPAGGFWGLAAGTASSIGMWAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEE VKIDHTAIQYVAMSPNAKDMAENMFRALWSWLVCVIVTVVVSLMTKPKPEKELVNLVYGC EEEEHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC TDIPSEGHLPVWQRPAFWACVVGAVFIALNIIFW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]