| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620344
Identifier: 116620344
GI number: 116620344
Start: 1505282
End: 1505599
Strand: Direct
Name: 116620344
Synonym: Acid_1221
Alternate gene names: NA
Gene position: 1505282-1505599 (Clockwise)
Preceding gene: 116620343
Following gene: 116620345
Centisome position: 15.1
GC content: 59.43
Gene sequence:
>318_bases ATGGACAACAGCACTCCCGAAAAGCAGCAAGTTCGCGTCACCATTCTTAGCCGTCCGTACACGCTGCTCACCAGCGGCGA TCCGGGGGAGGTTGAGCAGGTGGCTGCGAGCGTTGACGAGCTGATGCTCTCGATCGCCTCCAAGGCGCCGAACGCGGATT CCACCCGTATTGCCGTACTGGCGTGCCTGCACCTGGCTGACAAACTGCGCGCGATCGAGCGCGATCTCAATCAACTCAAA GAGCGTGTCGACCGCAAGAGCGAAGAGTTCGCCGGCATGCTGGAACAGATTATCGAAGGAGCTGGAGAACGCTCATGA
Upstream 100 bases:
>100_bases GCCGCATCGAAAAGCTGCTGGGACAGATCGACCAATTGAGCGCCTCCTAAACCGGGGCGCTTATTTTTTTTTGGGCGGGG GCTCCGGATGGACACTTCGC
Downstream 100 bases:
>100_bases TTTGGCGCGTGATATTGCCGGCGATCGCCGGAGCGGCCCTGTTCGCGGCCTCCTCGTACCCCACGGAAATCGCGGAGTGG CGCCGTAACCGGGAAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MDNSTPEKQQVRVTILSRPYTLLTSGDPGEVEQVAASVDELMLSIASKAPNADSTRIAVLACLHLADKLRAIERDLNQLK ERVDRKSEEFAGMLEQIIEGAGERS
Sequences:
>Translated_105_residues MDNSTPEKQQVRVTILSRPYTLLTSGDPGEVEQVAASVDELMLSIASKAPNADSTRIAVLACLHLADKLRAIERDLNQLK ERVDRKSEEFAGMLEQIIEGAGERS >Mature_105_residues MDNSTPEKQQVRVTILSRPYTLLTSGDPGEVEQVAASVDELMLSIASKAPNADSTRIAVLACLHLADKLRAIERDLNQLK ERVDRKSEEFAGMLEQIIEGAGERS
Specific function: Unknown
COG id: COG3027
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11537; Mature: 11537
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSTPEKQQVRVTILSRPYTLLTSGDPGEVEQVAASVDELMLSIASKAPNADSTRIAVL CCCCCCCHHHHHHHEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ACLHLADKLRAIERDLNQLKERVDRKSEEFAGMLEQIIEGAGERS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDNSTPEKQQVRVTILSRPYTLLTSGDPGEVEQVAASVDELMLSIASKAPNADSTRIAVL CCCCCCCHHHHHHHEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ACLHLADKLRAIERDLNQLKERVDRKSEEFAGMLEQIIEGAGERS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA