| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620339
Identifier: 116620339
GI number: 116620339
Start: 1500998
End: 1503283
Strand: Direct
Name: 116620339
Synonym: Acid_1216
Alternate gene names: NA
Gene position: 1500998-1503283 (Clockwise)
Preceding gene: 116620338
Following gene: 116620340
Centisome position: 15.06
GC content: 58.79
Gene sequence:
>2286_bases ATGCGAGCAGTTCCTCTTCCGGTACTTCTAGTACTTCTCGCCGCCGGGTGCGCGCGAAACTCCGGCTATTACGCCGAACA GGGTAACCGTTCGTTCGCCCAGGCGAGATATCAGGATGCGGAGTTAGACTACCGCAAAGCCATACAGAAGGATCCTCAGA ATGGCGAGGCTACTTATCGGCTGGCTTTGACGGAACTGAAGTTGGATCATGGCGTGGAGGCGTACGGTTTATTGGTGCGG GCTGTCGATTTGCTGCCTGACAACGATAGTGCGAAGGTCAAACTGGGGGATCTGGCGCTCGGGGCCTTGATGAAGGATAC CCGGCGGTCTCCGCAGTTCTATGAGCAGGTGGAAAAGCGCGCGGGCCAACTGCTCGCCAGAGATCCACAGTCCGTGGATG GTCTCCGGTTCAACGGATTTCTGGCGCTCCTGAATAAGCGTCCGGCGGATGCGATTGCCGCTTTCGAGCAGGTGCTGGCG CGAGACCCTGCGAATCGGGATGTCGCGCTCGGCCTGTTTCAAAGTCTTACCGAAGCCGGCCAAAGCGCCGCGGCGGAGAA AGCGGCCCTGGAGTTTGTTCAAAAAGACAGGAATTTTGGCGATTTCTACGACATCCTGTATCAGTTCTATCTTACGGAAC ACCGGCCCGCCGACGCCGAGAAGATCCTTCAACTGAAGGTCAGCAATAATCCCGGAGAGGCCGCGTACGTGGTTCAACTG GCGCGCCACTACCGGGGCGCCAACCGGACGGACGAAATGGCTGCCTCCCTGCAGCGGCTGTTGAAGGATTCCAATGCGTT CCCATTGGGTCGAATGTATGTCGGGGACTTCTACGCCGGCATACAGGATTGGAATGCAGCCCTGGAGCAATACAACGAAG GAATGCGAGCCAGCCCCGCCCAAAAGATCTCTTATGGGAAGCGAATTGCAGACTTATGGCTTGCGCAAGGCCAGGGCGAG CGAGCCGCGGAGGCGGTCGCAGAGGTGCTGAAAACGGAGCCAAACGATATGGCGGCGCGCGCGGTCAAGGCGTCTCTCCT GATGGCGCGAGGAGGCAAGGAGAACCTCGCCGCGGCCGCTTCCGAGTTCAGGGACCTGATGCGCAAGGATCCTGGAAATG CGACCTGGCATTTCAACCTGGGACGCGCTTTGGCGGCGGTGGGAGACTCCGGTGCCGCGGGAGAGTTTCAGGAGGCAGTG AGGCTGCGCGCCGATTTCATACCCCCTCGGATTGCGCTCGCTGAATTGAGCCGGATCAACGGAAACTATCAGCAAGTACT GAGGTACGCCGACGAGGTTCTCGCGATTGCGCCGGGCCTGAGCTCGGTTCACTTATTACGGTCTATGGCTCTGATGGGTC TCGACCGGAGCGGCGAAGCGCAATCGGAGCTGCGATTGTTGGAGAGGTTGATACCGGGCGACGCGGAGGTTCAGTTCCAA CTGGCGACGACTAAGGTGAAACAAGGAAAGTATCGAGAGGCGGAAGGACTTCTGCGATCGCTGAACAGCAAGGCTCCCGG CGATGCCAGAATCCTTCGAGAACTCGCGGGCGCCCTCACCGCGCAGAACCAGCAGCCGGCCGCGCTGGCTATGCTCCAGG AGGAACTGAACAGGCATCCAGAGGCGGACTCGGTTCGCGAACTTCTGGGCGAGACGAGCCTCGAATCGGGTCACTACGAT GTGGCGATCGAGCAGGCCGGACGATTGCTGTCTAAGTATCCGGATTCTGCCCGTCTACATTTGCTGGTTGGCAAAGCGTA CTTTCGCAAGGGGGACCTGGCGGGCGCCACCCGCGCGTACCAGAGAGCCTCTGTATTGAGGCCCTCCGACCCGGCAGCGG TCAACGCCCTGGCTTCCACCTATGCAGTGCAGGGCCAAGCTTCGCAAGCCATGGAAGCCTACCGCCACGTGCTGAAACTC AACCCCGATGACTGGGGAGCGATGAACAATCTGGCGTTCTTGATTGCTGAGAATAACGGCAGCCTGGATGAGGCGTTGTC GCTTTCGTCGCGCGTTATTCGTAAGTTTCCCAACGTGCCTGACTTCAACGATACCCTGGGCTGGATCTATGTCAAGAAGG GTATGAGCGACAGTGCCATACCGATGTTCCGGAAACTGGCGCGGCAGGACCCGCAAAACGCCACTTACCGATATCATCTG GGAAAGGCGCTGGTACAAAAGGGCGATCCTAAGTCCGCCGCGGAGCAATTTCAACATGCATTACTGCTAAATCCGTCGCC GGAGTTACGCCAAGATCTAACATCGGCGCTTCAGGAAACACGATAG
Upstream 100 bases:
>100_bases TTTGTCAATAAGTTACCAGGCTTTGCCGTCTTACGTTAGTAGATCGACATTCTCGAGCTGGCTAACTCCACCCAACTTAG GAGTAAGGGACCGTGTATAA
Downstream 100 bases:
>100_bases GACGGTCTAGGAGTCCTATCGCAGAGTACTGAAACTAAGTCATCTTAAGGGGTAAGGTTTTACCTTGCCCTCTGGACTTA TGTGGCTTAGACTCACTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; Peptidase; PEP-CTERM System TPR-Repeat Lipoprotein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; Sulfotransferase; Tetratricopeptide Repeat Protein; Glycosyl Transferase Family Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Non-Specific Serine/Threonine Protein Kinase; Tetratricopeptide TPR_4 Containing Protein; Transmembrane Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; SPY Protein; TPR Repeat Domain-Containing Protein; Tpr Domain Protein
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYRLALTELKLDHGVEAYGLLVR AVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKRAGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLA RDPANRDVALGLFQSLTEAGQSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPAQKISYGKRIADLWLAQGQGE RAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAASEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAV RLRADFIPPRIALAELSRINGNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHPEADSVRELLGETSLESGHYD VAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKL NPDDWGAMNNLAFLIAENNGSLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR
Sequences:
>Translated_761_residues MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYRLALTELKLDHGVEAYGLLVR AVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKRAGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLA RDPANRDVALGLFQSLTEAGQSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPAQKISYGKRIADLWLAQGQGE RAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAASEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAV RLRADFIPPRIALAELSRINGNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHPEADSVRELLGETSLESGHYD VAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKL NPDDWGAMNNLAFLIAENNGSLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR >Mature_761_residues MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYRLALTELKLDHGVEAYGLLVR AVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKRAGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLA RDPANRDVALGLFQSLTEAGQSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPAQKISYGKRIADLWLAQGQGE RAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAASEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAV RLRADFIPPRIALAELSRINGNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHPEADSVRELLGETSLESGHYD VAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKL NPDDWGAMNNLAFLIAENNGSLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307150, Length=400, Percent_Identity=25, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI32307148, Length=400, Percent_Identity=25, Blast_Score=70, Evalue=9e-12, Organism=Drosophila melanogaster, GI17647755, Length=258, Percent_Identity=24.4186046511628, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585827, Length=258, Percent_Identity=24.4186046511628, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585829, Length=258, Percent_Identity=24.4186046511628, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83681; Mature: 83681
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYR CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEE LALTELKLDHGVEAYGLLVRAVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKR EEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHH AGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLARDPANRDVALGLFQSLTEAG HHHHHHCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHH ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPA HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH QKISYGKRIADLWLAQGQGERAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH SEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAVRLRADFIPPRIALAELSRIN HHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC GNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHP EEHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC EADSVRELLGETSLESGHYDVAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAY CHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCHHHHHH QRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKLNPDDWGAMNNLAFLIAENNG HHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC SLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEHH GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR HHHHHHCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYR CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEE LALTELKLDHGVEAYGLLVRAVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKR EEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHH AGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLARDPANRDVALGLFQSLTEAG HHHHHHCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHH ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPA HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH QKISYGKRIADLWLAQGQGERAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH SEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAVRLRADFIPPRIALAELSRIN HHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC GNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHP EEHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC EADSVRELLGETSLESGHYDVAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAY CHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCHHHHHH QRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKLNPDDWGAMNNLAFLIAENNG HHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC SLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEHH GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR HHHHHHCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA