Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is 116620339

Identifier: 116620339

GI number: 116620339

Start: 1500998

End: 1503283

Strand: Direct

Name: 116620339

Synonym: Acid_1216

Alternate gene names: NA

Gene position: 1500998-1503283 (Clockwise)

Preceding gene: 116620338

Following gene: 116620340

Centisome position: 15.06

GC content: 58.79

Gene sequence:

>2286_bases
ATGCGAGCAGTTCCTCTTCCGGTACTTCTAGTACTTCTCGCCGCCGGGTGCGCGCGAAACTCCGGCTATTACGCCGAACA
GGGTAACCGTTCGTTCGCCCAGGCGAGATATCAGGATGCGGAGTTAGACTACCGCAAAGCCATACAGAAGGATCCTCAGA
ATGGCGAGGCTACTTATCGGCTGGCTTTGACGGAACTGAAGTTGGATCATGGCGTGGAGGCGTACGGTTTATTGGTGCGG
GCTGTCGATTTGCTGCCTGACAACGATAGTGCGAAGGTCAAACTGGGGGATCTGGCGCTCGGGGCCTTGATGAAGGATAC
CCGGCGGTCTCCGCAGTTCTATGAGCAGGTGGAAAAGCGCGCGGGCCAACTGCTCGCCAGAGATCCACAGTCCGTGGATG
GTCTCCGGTTCAACGGATTTCTGGCGCTCCTGAATAAGCGTCCGGCGGATGCGATTGCCGCTTTCGAGCAGGTGCTGGCG
CGAGACCCTGCGAATCGGGATGTCGCGCTCGGCCTGTTTCAAAGTCTTACCGAAGCCGGCCAAAGCGCCGCGGCGGAGAA
AGCGGCCCTGGAGTTTGTTCAAAAAGACAGGAATTTTGGCGATTTCTACGACATCCTGTATCAGTTCTATCTTACGGAAC
ACCGGCCCGCCGACGCCGAGAAGATCCTTCAACTGAAGGTCAGCAATAATCCCGGAGAGGCCGCGTACGTGGTTCAACTG
GCGCGCCACTACCGGGGCGCCAACCGGACGGACGAAATGGCTGCCTCCCTGCAGCGGCTGTTGAAGGATTCCAATGCGTT
CCCATTGGGTCGAATGTATGTCGGGGACTTCTACGCCGGCATACAGGATTGGAATGCAGCCCTGGAGCAATACAACGAAG
GAATGCGAGCCAGCCCCGCCCAAAAGATCTCTTATGGGAAGCGAATTGCAGACTTATGGCTTGCGCAAGGCCAGGGCGAG
CGAGCCGCGGAGGCGGTCGCAGAGGTGCTGAAAACGGAGCCAAACGATATGGCGGCGCGCGCGGTCAAGGCGTCTCTCCT
GATGGCGCGAGGAGGCAAGGAGAACCTCGCCGCGGCCGCTTCCGAGTTCAGGGACCTGATGCGCAAGGATCCTGGAAATG
CGACCTGGCATTTCAACCTGGGACGCGCTTTGGCGGCGGTGGGAGACTCCGGTGCCGCGGGAGAGTTTCAGGAGGCAGTG
AGGCTGCGCGCCGATTTCATACCCCCTCGGATTGCGCTCGCTGAATTGAGCCGGATCAACGGAAACTATCAGCAAGTACT
GAGGTACGCCGACGAGGTTCTCGCGATTGCGCCGGGCCTGAGCTCGGTTCACTTATTACGGTCTATGGCTCTGATGGGTC
TCGACCGGAGCGGCGAAGCGCAATCGGAGCTGCGATTGTTGGAGAGGTTGATACCGGGCGACGCGGAGGTTCAGTTCCAA
CTGGCGACGACTAAGGTGAAACAAGGAAAGTATCGAGAGGCGGAAGGACTTCTGCGATCGCTGAACAGCAAGGCTCCCGG
CGATGCCAGAATCCTTCGAGAACTCGCGGGCGCCCTCACCGCGCAGAACCAGCAGCCGGCCGCGCTGGCTATGCTCCAGG
AGGAACTGAACAGGCATCCAGAGGCGGACTCGGTTCGCGAACTTCTGGGCGAGACGAGCCTCGAATCGGGTCACTACGAT
GTGGCGATCGAGCAGGCCGGACGATTGCTGTCTAAGTATCCGGATTCTGCCCGTCTACATTTGCTGGTTGGCAAAGCGTA
CTTTCGCAAGGGGGACCTGGCGGGCGCCACCCGCGCGTACCAGAGAGCCTCTGTATTGAGGCCCTCCGACCCGGCAGCGG
TCAACGCCCTGGCTTCCACCTATGCAGTGCAGGGCCAAGCTTCGCAAGCCATGGAAGCCTACCGCCACGTGCTGAAACTC
AACCCCGATGACTGGGGAGCGATGAACAATCTGGCGTTCTTGATTGCTGAGAATAACGGCAGCCTGGATGAGGCGTTGTC
GCTTTCGTCGCGCGTTATTCGTAAGTTTCCCAACGTGCCTGACTTCAACGATACCCTGGGCTGGATCTATGTCAAGAAGG
GTATGAGCGACAGTGCCATACCGATGTTCCGGAAACTGGCGCGGCAGGACCCGCAAAACGCCACTTACCGATATCATCTG
GGAAAGGCGCTGGTACAAAAGGGCGATCCTAAGTCCGCCGCGGAGCAATTTCAACATGCATTACTGCTAAATCCGTCGCC
GGAGTTACGCCAAGATCTAACATCGGCGCTTCAGGAAACACGATAG

Upstream 100 bases:

>100_bases
TTTGTCAATAAGTTACCAGGCTTTGCCGTCTTACGTTAGTAGATCGACATTCTCGAGCTGGCTAACTCCACCCAACTTAG
GAGTAAGGGACCGTGTATAA

Downstream 100 bases:

>100_bases
GACGGTCTAGGAGTCCTATCGCAGAGTACTGAAACTAAGTCATCTTAAGGGGTAAGGTTTTACCTTGCCCTCTGGACTTA
TGTGGCTTAGACTCACTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; Peptidase; PEP-CTERM System TPR-Repeat Lipoprotein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; Sulfotransferase; Tetratricopeptide Repeat Protein; Glycosyl Transferase Family Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Non-Specific Serine/Threonine Protein Kinase; Tetratricopeptide TPR_4 Containing Protein; Transmembrane Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; SPY Protein; TPR Repeat Domain-Containing Protein; Tpr Domain Protein

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYRLALTELKLDHGVEAYGLLVR
AVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKRAGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLA
RDPANRDVALGLFQSLTEAGQSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL
ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPAQKISYGKRIADLWLAQGQGE
RAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAASEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAV
RLRADFIPPRIALAELSRINGNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ
LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHPEADSVRELLGETSLESGHYD
VAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKL
NPDDWGAMNNLAFLIAENNGSLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL
GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR

Sequences:

>Translated_761_residues
MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYRLALTELKLDHGVEAYGLLVR
AVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKRAGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLA
RDPANRDVALGLFQSLTEAGQSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL
ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPAQKISYGKRIADLWLAQGQGE
RAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAASEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAV
RLRADFIPPRIALAELSRINGNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ
LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHPEADSVRELLGETSLESGHYD
VAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKL
NPDDWGAMNNLAFLIAENNGSLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL
GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR
>Mature_761_residues
MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYRLALTELKLDHGVEAYGLLVR
AVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKRAGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLA
RDPANRDVALGLFQSLTEAGQSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL
ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPAQKISYGKRIADLWLAQGQGE
RAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAASEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAV
RLRADFIPPRIALAELSRINGNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ
LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHPEADSVRELLGETSLESGHYD
VAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKL
NPDDWGAMNNLAFLIAENNGSLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL
GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=400, Percent_Identity=25, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI32307148, Length=400, Percent_Identity=25, Blast_Score=70, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17647755, Length=258, Percent_Identity=24.4186046511628, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24585827, Length=258, Percent_Identity=24.4186046511628, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24585829, Length=258, Percent_Identity=24.4186046511628, Blast_Score=75, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83681; Mature: 83681

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYR
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEE
LALTELKLDHGVEAYGLLVRAVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKR
EEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHH
AGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLARDPANRDVALGLFQSLTEAG
HHHHHHCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHH
ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPA
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QKISYGKRIADLWLAQGQGERAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
SEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAVRLRADFIPPRIALAELSRIN
HHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
GNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE
LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHP
EEHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
EADSVRELLGETSLESGHYDVAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAY
CHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCHHHHHH
QRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKLNPDDWGAMNNLAFLIAENNG
HHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
SLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEHH
GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR
HHHHHHCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAVPLPVLLVLLAAGCARNSGYYAEQGNRSFAQARYQDAELDYRKAIQKDPQNGEATYR
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEE
LALTELKLDHGVEAYGLLVRAVDLLPDNDSAKVKLGDLALGALMKDTRRSPQFYEQVEKR
EEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHH
AGQLLARDPQSVDGLRFNGFLALLNKRPADAIAAFEQVLARDPANRDVALGLFQSLTEAG
HHHHHHCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QSAAAEKAALEFVQKDRNFGDFYDILYQFYLTEHRPADAEKILQLKVSNNPGEAAYVVQL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHH
ARHYRGANRTDEMAASLQRLLKDSNAFPLGRMYVGDFYAGIQDWNAALEQYNEGMRASPA
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QKISYGKRIADLWLAQGQGERAAEAVAEVLKTEPNDMAARAVKASLLMARGGKENLAAAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
SEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEAVRLRADFIPPRIALAELSRIN
HHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
GNYQQVLRYADEVLAIAPGLSSVHLLRSMALMGLDRSGEAQSELRLLERLIPGDAEVQFQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE
LATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPAALAMLQEELNRHP
EEHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
EADSVRELLGETSLESGHYDVAIEQAGRLLSKYPDSARLHLLVGKAYFRKGDLAGATRAY
CHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCHHHHHH
QRASVLRPSDPAAVNALASTYAVQGQASQAMEAYRHVLKLNPDDWGAMNNLAFLIAENNG
HHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
SLDEALSLSSRVIRKFPNVPDFNDTLGWIYVKKGMSDSAIPMFRKLARQDPQNATYRYHL
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEHH
GKALVQKGDPKSAAEQFQHALLLNPSPELRQDLTSALQETR
HHHHHHCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA