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The map label for this gene is yodM [H]

Identifier: 116620313

GI number: 116620313

Start: 1468648

End: 1469286

Strand: Direct

Name: yodM [H]

Synonym: Acid_1190

Alternate gene names: 116620313

Gene position: 1468648-1469286 (Clockwise)

Preceding gene: 116620310

Following gene: 116620314

Centisome position: 14.74

GC content: 63.22

Gene sequence:

>639_bases
TTGATACGGCTCAAGTTTCACCCCACTCGCGACTACACCCTCGCCGCCCTCACCGCTCTCGCCTTTGCCTGGATCGCGTA
CATCGTTCCGGATTCCGGCCCTACCGCACTCGATGTCGCCGTCCGCGCCTTCATCCATTCCTTCGCCAGCCCAGCTCTCA
CTGCCGCTCTGAAAGTTGTCACCCAACTCGGTGGAGGCTGGTTTCTCTTTCCTCTCGGCACACTGGTCGTGCTCGCACTT
TACTCCGCCGGCCGGCGTCGCGAGGCCGCCCTCTTCACTGTCGCCGTCCTCGGTGCCAACATTCTCGACGAGGCCATGAA
GCTGGTTTTCCATCGCACCCGCCCCGACCCCTGGTTCGATTACCCGCTCCCGCGTACCTACAGTTTCCCCAGCGGCCACT
CCTTCGTCTCCTTCTGTTTTTACTTCGCCCTCGCCGAAATCCTCGTTGGCGACGAATGGCCCCGCTCGCGCCGCCTCGCC
GTCTGGATCGCCGCCGCTCTCTTCACCCTGGCCATCGGGCTCTCTCGCGCCTACCTCGGGGTGCATTACCCCACTGACGT
TCTCGCGGGCTACATCGCTGCCGTGGCTTGGACCACAGTCATCCGCATCGCGCACCATACGTATTGGGCCCCTGTATGA

Upstream 100 bases:

>100_bases
ACACAAAAAAAGATCGCAAAAAGCCGGATTCTCATAGGGAAATGTCTATTGTGGCATACTGCACGACACGTCAGTTTATT
GAATTGTAAAGTAGAAGTAG

Downstream 100 bases:

>100_bases
TTTAATTGAAAATCGGCCTAAGAATGAAAACGAATTCCGTGCGGAAACAGTCCCCGCCCGGTAGGTGTCCGGCGCCAACT
CCTGCTGCTCATCAAACTCT

Product: PA-phosphatase-like phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MIRLKFHPTRDYTLAALTALAFAWIAYIVPDSGPTALDVAVRAFIHSFASPALTAALKVVTQLGGGWFLFPLGTLVVLAL
YSAGRRREAALFTVAVLGANILDEAMKLVFHRTRPDPWFDYPLPRTYSFPSGHSFVSFCFYFALAEILVGDEWPRSRRLA
VWIAAALFTLAIGLSRAYLGVHYPTDVLAGYIAAVAWTTVIRIAHHTYWAPV

Sequences:

>Translated_212_residues
MIRLKFHPTRDYTLAALTALAFAWIAYIVPDSGPTALDVAVRAFIHSFASPALTAALKVVTQLGGGWFLFPLGTLVVLAL
YSAGRRREAALFTVAVLGANILDEAMKLVFHRTRPDPWFDYPLPRTYSFPSGHSFVSFCFYFALAEILVGDEWPRSRRLA
VWIAAALFTLAIGLSRAYLGVHYPTDVLAGYIAAVAWTTVIRIAHHTYWAPV
>Mature_212_residues
MIRLKFHPTRDYTLAALTALAFAWIAYIVPDSGPTALDVAVRAFIHSFASPALTAALKVVTQLGGGWFLFPLGTLVVLAL
YSAGRRREAALFTVAVLGANILDEAMKLVFHRTRPDPWFDYPLPRTYSFPSGHSFVSFCFYFALAEILVGDEWPRSRRLA
VWIAAALFTLAIGLSRAYLGVHYPTDVLAGYIAAVAWTTVIRIAHHTYWAPV

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 23460; Mature: 23460

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLKFHPTRDYTLAALTALAFAWIAYIVPDSGPTALDVAVRAFIHSFASPALTAALKVV
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
TQLGGGWFLFPLGTLVVLALYSAGRRREAALFTVAVLGANILDEAMKLVFHRTRPDPWFD
HHHCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YPLPRTYSFPSGHSFVSFCFYFALAEILVGDEWPRSRRLAVWIAAALFTLAIGLSRAYLG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
VHYPTDVLAGYIAAVAWTTVIRIAHHTYWAPV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRLKFHPTRDYTLAALTALAFAWIAYIVPDSGPTALDVAVRAFIHSFASPALTAALKVV
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
TQLGGGWFLFPLGTLVVLALYSAGRRREAALFTVAVLGANILDEAMKLVFHRTRPDPWFD
HHHCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YPLPRTYSFPSGHSFVSFCFYFALAEILVGDEWPRSRRLAVWIAAALFTLAIGLSRAYLG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
VHYPTDVLAGYIAAVAWTTVIRIAHHTYWAPV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]