| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620267
Identifier: 116620267
GI number: 116620267
Start: 1408096
End: 1409238
Strand: Direct
Name: 116620267
Synonym: Acid_1144
Alternate gene names: NA
Gene position: 1408096-1409238 (Clockwise)
Preceding gene: 116620264
Following gene: 116620268
Centisome position: 14.13
GC content: 65.18
Gene sequence:
>1143_bases ATGCAGCGCGGGGAAAAGGCAGAAAATACAGAGCAGGGCGCGCATGATGGCCTCCAGATGTATTGTAGGCTATCTCCTAT GAGAATTGCGTGGCTGCTGGTGGTGTGCGCGGGGGTGGGGTGCGCGCAATCCCTAGTGACGATTGCGGGTACGGGGACTG CGGGTTCTTCCGGCGACGGTGGGCTGGGGACGCAGGCGCAGGTCAACAATCCTTACGGGCTCACGATGGGTCCTGATGGG GCGCTGTATTTCTGCGAGATCGGCAACCACCGGGTGCGGCGGCTGGATTTGAAGACGAACGTGATCTCGACGGCGGCGGG CAGCGGAGAGAAGGGATATTCGGGCGACGGCGGTCCGGCGCTCGGCGCGGCGCTCAATGAGCCGTACGAGGTTCGTTTCG ACCGGGTGGGGAACATGTTCATCGCGGAGATGCAGAATCACGTGGTGCGGCGGGTGGATGCCAAGACGCGCGTGATTTCC ACGGTGGCGGGCACCGGCACGGCGGGGTTTGGCGGGGATGGCGGGCCGGCCACAGCGGCGTTGCTGCGGCAGCCGCACAG TATCGCGTTCGATGGGGAAGGGCGGCTGCTGATTTGCGATATCGGCAACCATCGGATCCGGCGCGTGGATTTGAAATCCG GAAAGATCGAGACGTGGGCAGGGACAGGCGAACGCAAGCCCACGCCGGATGGCGCGCCCATCGCAGGGACGCCGCTGAAT GGGCCGCGTGCGATCACGTCCGACCCCGAGGGCAATCTTTACCTGGTGCTGCGCGAGGGTAACGCGGTGTACCGGATGGA CGTGCGGGCAGGCAAAATCTTTCACGTCGCAGGCACGGGGGAGAGCGGGTATAGCGGCGACGGCGGTCCGGCGAAGCTGG CGAAGCTTTCAGGGCCAAAGGGAATCGCGTGGGCGCCGGACGGGAGCCTGTACCTGGCGGATACGGAGAGCCATACGATC CGGAGGGTGGATTTGAAATCGGGCGTGATCACGACGGTGGCGGGCACGGGTAAGCGCGGGGATGGACCGGATGGCGATGC CAGGATGTGCCAACTTTCGCGGCCGCACGGGATTTTCGTGAGCGCGGCGGGGGCGGTTTTCATCGCGGACAGCGAGTCTC ACCGGGTGCGGGCGTTACGGTAG
Upstream 100 bases:
>100_bases TGATCGCGGCGATTTGACTGAGCTGAGGTGCGGTGAGACTGAGATAATCCCTGAGGGCGGCGGGAATTCCGGCGCCGGCG GGTTGGGGGGCAGTTTGGGC
Downstream 100 bases:
>100_bases GAACGGCGCAACTTATCGGTTGACCTTTCAACGTGTTTGGCACATTCTAGAGGCAGCTTTTCGAGGGTTTGGATGCGAAG TGCAGGACTGTGCGTTTTCG
Product: NHL repeat-containing protein
Products: NA
Alternate protein names: NHL Repeat Containing Protein; Serine/Threonine Protein Kinase; YD Repeat Protein; Fibronectin Type III Domain Protein; Serine/Threonine-Protein Kinase; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; Ascorbate-Dependent Monooxygenase; Leucine-Rich Repeat-Containing Protein; YD Repeat-Containing Protein; Redoxin Domain Protein; Protein Serine/Threonine Kinase; PKD Domain Containing Protein; Copper Amine Oxidase Domain Protein; Immunoglobulin I-Set Domain-Containing Protein; Lipoprotein; Ig Domain-Containing Protein
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MQRGEKAENTEQGAHDGLQMYCRLSPMRIAWLLVVCAGVGCAQSLVTIAGTGTAGSSGDGGLGTQAQVNNPYGLTMGPDG ALYFCEIGNHRVRRLDLKTNVISTAAGSGEKGYSGDGGPALGAALNEPYEVRFDRVGNMFIAEMQNHVVRRVDAKTRVIS TVAGTGTAGFGGDGGPATAALLRQPHSIAFDGEGRLLICDIGNHRIRRVDLKSGKIETWAGTGERKPTPDGAPIAGTPLN GPRAITSDPEGNLYLVLREGNAVYRMDVRAGKIFHVAGTGESGYSGDGGPAKLAKLSGPKGIAWAPDGSLYLADTESHTI RRVDLKSGVITTVAGTGKRGDGPDGDARMCQLSRPHGIFVSAAGAVFIADSESHRVRALR
Sequences:
>Translated_380_residues MQRGEKAENTEQGAHDGLQMYCRLSPMRIAWLLVVCAGVGCAQSLVTIAGTGTAGSSGDGGLGTQAQVNNPYGLTMGPDG ALYFCEIGNHRVRRLDLKTNVISTAAGSGEKGYSGDGGPALGAALNEPYEVRFDRVGNMFIAEMQNHVVRRVDAKTRVIS TVAGTGTAGFGGDGGPATAALLRQPHSIAFDGEGRLLICDIGNHRIRRVDLKSGKIETWAGTGERKPTPDGAPIAGTPLN GPRAITSDPEGNLYLVLREGNAVYRMDVRAGKIFHVAGTGESGYSGDGGPAKLAKLSGPKGIAWAPDGSLYLADTESHTI RRVDLKSGVITTVAGTGKRGDGPDGDARMCQLSRPHGIFVSAAGAVFIADSESHRVRALR >Mature_380_residues MQRGEKAENTEQGAHDGLQMYCRLSPMRIAWLLVVCAGVGCAQSLVTIAGTGTAGSSGDGGLGTQAQVNNPYGLTMGPDG ALYFCEIGNHRVRRLDLKTNVISTAAGSGEKGYSGDGGPALGAALNEPYEVRFDRVGNMFIAEMQNHVVRRVDAKTRVIS TVAGTGTAGFGGDGGPATAALLRQPHSIAFDGEGRLLICDIGNHRIRRVDLKSGKIETWAGTGERKPTPDGAPIAGTPLN GPRAITSDPEGNLYLVLREGNAVYRMDVRAGKIFHVAGTGESGYSGDGGPAKLAKLSGPKGIAWAPDGSLYLADTESHTI RRVDLKSGVITTVAGTGKRGDGPDGDARMCQLSRPHGIFVSAAGAVFIADSESHRVRALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42476013, Length=276, Percent_Identity=25, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI169790825, Length=358, Percent_Identity=26.8156424581006, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39579; Mature: 39579
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRGEKAENTEQGAHDGLQMYCRLSPMRIAWLLVVCAGVGCAQSLVTIAGTGTAGSSGDG CCCCCCCCCCCCCHHCCEEEEEECCHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCC GLGTQAQVNNPYGLTMGPDGALYFCEIGNHRVRRLDLKTNVISTAAGSGEKGYSGDGGPA CCCCCEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCC LGAALNEPYEVRFDRVGNMFIAEMQNHVVRRVDAKTRVISTVAGTGTAGFGGDGGPATAA HHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHCHHHHEEEEECCCCCCCCCCCCCHHHHH LLRQPHSIAFDGEGRLLICDIGNHRIRRVDLKSGKIETWAGTGERKPTPDGAPIAGTPLN HHCCCCCEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEECCCCC GPRAITSDPEGNLYLVLREGNAVYRMDVRAGKIFHVAGTGESGYSGDGGPAKLAKLSGPK CCEEECCCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHEECCCCC GIAWAPDGSLYLADTESHTIRRVDLKSGVITTVAGTGKRGDGPDGDARMCQLSRPHGIFV CEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEE SAAGAVFIADSESHRVRALR EECCEEEEECCCCCEEEECC >Mature Secondary Structure MQRGEKAENTEQGAHDGLQMYCRLSPMRIAWLLVVCAGVGCAQSLVTIAGTGTAGSSGDG CCCCCCCCCCCCCHHCCEEEEEECCHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCC GLGTQAQVNNPYGLTMGPDGALYFCEIGNHRVRRLDLKTNVISTAAGSGEKGYSGDGGPA CCCCCEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCC LGAALNEPYEVRFDRVGNMFIAEMQNHVVRRVDAKTRVISTVAGTGTAGFGGDGGPATAA HHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHCHHHHEEEEECCCCCCCCCCCCCHHHHH LLRQPHSIAFDGEGRLLICDIGNHRIRRVDLKSGKIETWAGTGERKPTPDGAPIAGTPLN HHCCCCCEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEECCCCC GPRAITSDPEGNLYLVLREGNAVYRMDVRAGKIFHVAGTGESGYSGDGGPAKLAKLSGPK CCEEECCCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHEECCCCC GIAWAPDGSLYLADTESHTIRRVDLKSGVITTVAGTGKRGDGPDGDARMCQLSRPHGIFV CEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEE SAAGAVFIADSESHRVRALR EECCEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA