| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620261
Identifier: 116620261
GI number: 116620261
Start: 1401516
End: 1402235
Strand: Reverse
Name: 116620261
Synonym: Acid_1138
Alternate gene names: NA
Gene position: 1402235-1401516 (Counterclockwise)
Preceding gene: 116620262
Following gene: 116620259
Centisome position: 14.07
GC content: 64.86
Gene sequence:
>720_bases TTGATATCTCGCCTCGGACGTGTGTTTGCATGCCTCGCTGCCGGCAGTTTCCTGGCGGTCGCCCAATCAAACCTCCCTTC CCCTCAACCGGATAACAGCCACTGGCTGGAACATCTGTTGAAAATCCCTATCCCCAGGTTCCCGACGTTCGTGCCCTTTC AGACAACCGCGTCCTCGGACTGCGCCGTCGCCCCGCTGAGCCCTGTCTGGGACCCGCGCGCGGCTGTCTTCGAGGCCGGC GCCGGAACCATGGCGATGGTCGATACCACCGGTTTGACCGAAGCCACCGCCGGCGCGCTGGCTAAATTGGAAGAATTGGT CGCGAAGGTCGGGGGCCGCCTCGAGCTGAAATCCGCCTACCGTCCGCTGGCCTACCAGGAACACCTGCAGGAAGTCTGGG ACAAAATGAGGGTTCTGCGCCGCAATCGCCAGCCCGGTTGCCAGGCCATTCGCGCCGAAGTCACCGCGGAGTTTTCCCGC CACCGCCTCCTGGTCACCCAGCGCCCGGTAACCGATTCCGATCACACCCGCGGCGTCGGCATCGACGCTGCCCTGATTCT CCCCGCTGGAGCCCGCCTGAAGCGCCGCCGCATTAGCCTTGACCGCCTCGCTCGCTCAGTCGGCTTTAAACGCCCCGACA TCCGCCACGACCCGGTCCACTTCCGCCTCCTGGCTACCGGCCCAATCGCCTCCATAGCCGCGATCCATTCGACCCCGTAG
Upstream 100 bases:
>100_bases CCCTCCACCGCGCTATAATTCACGCTTAGCTTACAGGTAATCCCGTACGGCGGTACTACGTCGAATGATTGACGCGATTC TTCTTCAGGAGTCCAACCGA
Downstream 100 bases:
>100_bases GCCAGGTCTCCCGGCCTGCCCGCTGACTTGTTGTTACGCCGTCCTCAACCGCTTGAAGAACCCGAGGCCAGAGCTGGAAG GAGCCTTCTCCTCCACTCCC
Product: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MISRLGRVFACLAAGSFLAVAQSNLPSPQPDNSHWLEHLLKIPIPRFPTFVPFQTTASSDCAVAPLSPVWDPRAAVFEAG AGTMAMVDTTGLTEATAGALAKLEELVAKVGGRLELKSAYRPLAYQEHLQEVWDKMRVLRRNRQPGCQAIRAEVTAEFSR HRLLVTQRPVTDSDHTRGVGIDAALILPAGARLKRRRISLDRLARSVGFKRPDIRHDPVHFRLLATGPIASIAAIHSTP
Sequences:
>Translated_239_residues MISRLGRVFACLAAGSFLAVAQSNLPSPQPDNSHWLEHLLKIPIPRFPTFVPFQTTASSDCAVAPLSPVWDPRAAVFEAG AGTMAMVDTTGLTEATAGALAKLEELVAKVGGRLELKSAYRPLAYQEHLQEVWDKMRVLRRNRQPGCQAIRAEVTAEFSR HRLLVTQRPVTDSDHTRGVGIDAALILPAGARLKRRRISLDRLARSVGFKRPDIRHDPVHFRLLATGPIASIAAIHSTP >Mature_239_residues MISRLGRVFACLAAGSFLAVAQSNLPSPQPDNSHWLEHLLKIPIPRFPTFVPFQTTASSDCAVAPLSPVWDPRAAVFEAG AGTMAMVDTTGLTEATAGALAKLEELVAKVGGRLELKSAYRPLAYQEHLQEVWDKMRVLRRNRQPGCQAIRAEVTAEFSR HRLLVTQRPVTDSDHTRGVGIDAALILPAGARLKRRRISLDRLARSVGFKRPDIRHDPVHFRLLATGPIASIAAIHSTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26145; Mature: 26145
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRLGRVFACLAAGSFLAVAQSNLPSPQPDNSHWLEHLLKIPIPRFPTFVPFQTTASSD CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC CAVAPLSPVWDPRAAVFEAGAGTMAMVDTTGLTEATAGALAKLEELVAKVGGRLELKSAY CEECCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHH RPLAYQEHLQEVWDKMRVLRRNRQPGCQAIRAEVTAEFSRHRLLVTQRPVTDSDHTRGVG CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCC IDAALILPAGARLKRRRISLDRLARSVGFKRPDIRHDPVHFRLLATGPIASIAAIHSTP CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCC >Mature Secondary Structure MISRLGRVFACLAAGSFLAVAQSNLPSPQPDNSHWLEHLLKIPIPRFPTFVPFQTTASSD CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC CAVAPLSPVWDPRAAVFEAGAGTMAMVDTTGLTEATAGALAKLEELVAKVGGRLELKSAY CEECCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHH RPLAYQEHLQEVWDKMRVLRRNRQPGCQAIRAEVTAEFSRHRLLVTQRPVTDSDHTRGVG CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCC IDAALILPAGARLKRRRISLDRLARSVGFKRPDIRHDPVHFRLLATGPIASIAAIHSTP CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA