| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620257
Identifier: 116620257
GI number: 116620257
Start: 1397375
End: 1398715
Strand: Reverse
Name: 116620257
Synonym: Acid_1134
Alternate gene names: NA
Gene position: 1398715-1397375 (Counterclockwise)
Preceding gene: 116620258
Following gene: 116620256
Centisome position: 14.04
GC content: 66.07
Gene sequence:
>1341_bases ATGGTAGACACTCACTCCGCCCCCACGCTCGCCGCGCTCGCCCCAAAGGTGCGCCGCCTCTTCGAACTCTCCGCCGCTAA GATCCGCTCCCTCGAGTCTGCCTGGGCTCCCGAGAAAGGTTCCCCCGTCTTCACCGTCGGCGGCAAGTACACCAGCCGCG GCTGGACCGAATGGACGCAGGGCTTTCAGTTCGGCGGCGCCATCCTCCAGTTCGACGCCACCGGCGACCCCGAATTCCTC GAGATCGGCCGCCAGCGCACCGTGGACGTCATGGCCCCTCACGTCAGCCACATCGGCGTTCATGATCACGGCTTCAACAA CGTCAGCACTTACGGCAATCTCCTCCGACTCATGGCCGAGGGCCGAATCCCCGAGAATCCCTGGGAACGCCGCTTCTACG AAATGGCGCTCAAAGTCTCCGGCGCCGTGCAGGCCGCGCGCTGGTCGCGCACTATCGACGGCGGCGGCTACATCTACAGC TTCAATGGTCCCCACTCTCTCTTCGTCGATACCATTCGCACCCTGCGCGCCCCCGCCGTCAGCCACCTGCTCGGCCACGT CCTGATGGGCGAGAACGATAAAAAGATCTCCCTGATCGACCGCGTCGCCCAGCACGCCCGCGCCACCGCAAAATATGCCG TCTGGTACGGCGAGGGCCGCGATTTCTACGACATCCGGGGCCGCACCGCGCACGAGAGCATCTTCAACGTCAACGACGGC AACTATCGCTGCCCCAACTCCCAGCAGGGCTACAGCCCCTTCAGCACCTGGACCCGCGGACTCGCCTGGGCCATGTGCGG CTTCGCCGAGCAGCTCGAACTCTTCGACACCTTCGAAGGCGAGGCCCATGCCGAAACCCGGGCCATCATGGAAAAGGCCG CCCGCGCCACCTGCGATTTCTACATCGAGCACACCCCGCCCGACGGCATCCCCTACTGGGACACCGGCGCTCCCGGCCTC GCCCACCTCGGCGACTGGCGCGCCCGCCCCGCCGACCCCTTCAACCACCACGAGCCCGTCGATAGCTCCGCCGCCGCCAT CGGCGCCCAGGGCCTGCTCCGCCTCGGCCGCCGCCTCAAGGACGACCGCTACTGGAATGCCGGCCTCAAAGTCTGCGACA CCCTCTTCGCCGAGCCGTACCTCAGCACCGACCCCGCCCACCAGGGCCTGATTCTTCACTCCGTCTACCACCGCCCCAAC GGCTGGGACGCGATCCCTCCCGGCGCCAAAGTCCCCGCCGGCGAGTCCAGTATGTGGGGCGATTACCACGCCCGCGAAGT CGCGCTCTACTTACTCCGCCTGATCGAAGAGAAGCCTTACTTGAAATTCTGGGTAACTTAG
Upstream 100 bases:
>100_bases ACGCAGAGAGACCCATTCGTGTTTTCTTCTTTGCGTTACTCTGCGGCTCTGCGGCTCTGCGAGAAAAATTCCCTCCCGCC ACCAGTTAAAATTACCTCGA
Downstream 100 bases:
>100_bases CCCCGCGATGGATTACACTGCTCTTGTTTACTCGCAGGCCGCAAACATCCGCACCGGAATATTTCGCCGCCCCATTCAGA GCCGCGACCGTCAGGGAGTG
Product: glycosyl hydrolase family protein
Products: NA
Alternate protein names: Unsaturated Glucuronyl Hydrolase; Glycosyl Hydrolase Family
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MVDTHSAPTLAALAPKVRRLFELSAAKIRSLESAWAPEKGSPVFTVGGKYTSRGWTEWTQGFQFGGAILQFDATGDPEFL EIGRQRTVDVMAPHVSHIGVHDHGFNNVSTYGNLLRLMAEGRIPENPWERRFYEMALKVSGAVQAARWSRTIDGGGYIYS FNGPHSLFVDTIRTLRAPAVSHLLGHVLMGENDKKISLIDRVAQHARATAKYAVWYGEGRDFYDIRGRTAHESIFNVNDG NYRCPNSQQGYSPFSTWTRGLAWAMCGFAEQLELFDTFEGEAHAETRAIMEKAARATCDFYIEHTPPDGIPYWDTGAPGL AHLGDWRARPADPFNHHEPVDSSAAAIGAQGLLRLGRRLKDDRYWNAGLKVCDTLFAEPYLSTDPAHQGLILHSVYHRPN GWDAIPPGAKVPAGESSMWGDYHAREVALYLLRLIEEKPYLKFWVT
Sequences:
>Translated_446_residues MVDTHSAPTLAALAPKVRRLFELSAAKIRSLESAWAPEKGSPVFTVGGKYTSRGWTEWTQGFQFGGAILQFDATGDPEFL EIGRQRTVDVMAPHVSHIGVHDHGFNNVSTYGNLLRLMAEGRIPENPWERRFYEMALKVSGAVQAARWSRTIDGGGYIYS FNGPHSLFVDTIRTLRAPAVSHLLGHVLMGENDKKISLIDRVAQHARATAKYAVWYGEGRDFYDIRGRTAHESIFNVNDG NYRCPNSQQGYSPFSTWTRGLAWAMCGFAEQLELFDTFEGEAHAETRAIMEKAARATCDFYIEHTPPDGIPYWDTGAPGL AHLGDWRARPADPFNHHEPVDSSAAAIGAQGLLRLGRRLKDDRYWNAGLKVCDTLFAEPYLSTDPAHQGLILHSVYHRPN GWDAIPPGAKVPAGESSMWGDYHAREVALYLLRLIEEKPYLKFWVT >Mature_446_residues MVDTHSAPTLAALAPKVRRLFELSAAKIRSLESAWAPEKGSPVFTVGGKYTSRGWTEWTQGFQFGGAILQFDATGDPEFL EIGRQRTVDVMAPHVSHIGVHDHGFNNVSTYGNLLRLMAEGRIPENPWERRFYEMALKVSGAVQAARWSRTIDGGGYIYS FNGPHSLFVDTIRTLRAPAVSHLLGHVLMGENDKKISLIDRVAQHARATAKYAVWYGEGRDFYDIRGRTAHESIFNVNDG NYRCPNSQQGYSPFSTWTRGLAWAMCGFAEQLELFDTFEGEAHAETRAIMEKAARATCDFYIEHTPPDGIPYWDTGAPGL AHLGDWRARPADPFNHHEPVDSSAAAIGAQGLLRLGRRLKDDRYWNAGLKVCDTLFAEPYLSTDPAHQGLILHSVYHRPN GWDAIPPGAKVPAGESSMWGDYHAREVALYLLRLIEEKPYLKFWVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49861; Mature: 49861
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDTHSAPTLAALAPKVRRLFELSAAKIRSLESAWAPEKGSPVFTVGGKYTSRGWTEWTQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHH GFQFGGAILQFDATGDPEFLEIGRQRTVDVMAPHVSHIGVHDHGFNNVSTYGNLLRLMAE HHHCCCEEEEECCCCCHHHHHHCCHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHC GRIPENPWERRFYEMALKVSGAVQAARWSRTIDGGGYIYSFNGPHSLFVDTIRTLRAPAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCHHHHHHHHHHHHHHHH SHLLGHVLMGENDKKISLIDRVAQHARATAKYAVWYGEGRDFYDIRGRTAHESIFNVNDG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCEEECCCCCHHHHEEECCCC NYRCPNSQQGYSPFSTWTRGLAWAMCGFAEQLELFDTFEGEAHAETRAIMEKAARATCDF CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEE YIEHTPPDGIPYWDTGAPGLAHLGDWRARPADPFNHHEPVDSSAAAIGAQGLLRLGRRLK EEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC DDRYWNAGLKVCDTLFAEPYLSTDPAHQGLILHSVYHRPNGWDAIPPGAKVPAGESSMWG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC DYHAREVALYLLRLIEEKPYLKFWVT CHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MVDTHSAPTLAALAPKVRRLFELSAAKIRSLESAWAPEKGSPVFTVGGKYTSRGWTEWTQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHH GFQFGGAILQFDATGDPEFLEIGRQRTVDVMAPHVSHIGVHDHGFNNVSTYGNLLRLMAE HHHCCCEEEEECCCCCHHHHHHCCHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHC GRIPENPWERRFYEMALKVSGAVQAARWSRTIDGGGYIYSFNGPHSLFVDTIRTLRAPAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCHHHHHHHHHHHHHHHH SHLLGHVLMGENDKKISLIDRVAQHARATAKYAVWYGEGRDFYDIRGRTAHESIFNVNDG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCEEECCCCCHHHHEEECCCC NYRCPNSQQGYSPFSTWTRGLAWAMCGFAEQLELFDTFEGEAHAETRAIMEKAARATCDF CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEE YIEHTPPDGIPYWDTGAPGLAHLGDWRARPADPFNHHEPVDSSAAAIGAQGLLRLGRRLK EEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC DDRYWNAGLKVCDTLFAEPYLSTDPAHQGLILHSVYHRPNGWDAIPPGAKVPAGESSMWG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC DYHAREVALYLLRLIEEKPYLKFWVT CHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA