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The map label for this gene is yehT [C]

Identifier: 116620254

GI number: 116620254

Start: 1393680

End: 1394447

Strand: Reverse

Name: yehT [C]

Synonym: Acid_1131

Alternate gene names: 116620254

Gene position: 1394447-1393680 (Counterclockwise)

Preceding gene: 116620256

Following gene: 116620253

Centisome position: 13.99

GC content: 63.93

Gene sequence:

>768_bases
ATGGACCAGCGCCGCATTACAACTTTGATCGTCGATGATGAGCCCGTGGCACGCCGGGTCCTGCGCGAAGGCTTGGAATC
CATCCCCGGAATCGAGATCGCCGGAGAAGCCGCCAACGGGCGAGAGGCGCTCGACAAGATCGCCGCGCTGAGGCCGGAAC
TCGTCTTCCTGGACCTCCAGATGCCGGTGATGACCGGGTTCGAAGTCGTGCGCCGCCTCGACGGTCCGCCCTTGCCGGTA
ATCGTGATCGTCACTGCCTTCGACCAGCACGCTCTTCAGGCCTTCGAAGCGGGAGCCATCGACTACCTGCTCAAGCCGGT
CACCGAAGCGCGCCTCCAGAGGGCCGTGGAACGCGCCGCCGTGCTCCTGAATCGCCCCATCGAAATCGCCAATCACGTGG
CCAGCCTCGCCTCCGTGACCACGCCGGAGCATCCCAACAAGATCCGTAAGGTGGTCGGCCGCAGCGGCTCGGACTACGTG
CTGCTCGACGCCGATGAGGTACTCGCCTTTCAAGCCGAGCGCGAGCTGGTGTGGATCATCACCGCGAAGCAGCGCCTCTT
CGCCACCCAGTCGCTCAAGACCATCGAAGAGCGTCTGGTCGGACCGCAGTTCCAGCGCGTGCACCGCAACGCCATCGTGA
ACGTGGATCACGTGCGCAAGCTGACCGCGCTCAGCAGCCAGCGCTGGTACATGACGTTGAGCAACGGACTGCAATTGGTG
GTGAGCAAGCGCCAGGCTCACAAGATCCGCGACCTGCTGCAAACCTAG

Upstream 100 bases:

>100_bases
TCCCAGCATCGCCGGCCGCCTCTGCAGGCGCGTCTCCTTTACTGTACTGCGAACCAACTTGCCCGCTCACCGGGAAGTAT
GGGACGCTGAATCGCACGCA

Downstream 100 bases:

>100_bases
GTCCGTTCATGGCCGTTTTCATCCCGCTCATCGGCTATTTCGCCCGCTGGTGACTATAACCTCGTGTTTGCGCAGGCCCG
GTCCGAATACTGGAGAACAT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDQRRITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQMPVMTGFEVVRRLDGPPLPV
IVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAAVLLNRPIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYV
LLDADEVLAFQAERELVWIITAKQRLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSNGLQLV
VSKRQAHKIRDLLQT

Sequences:

>Translated_255_residues
MDQRRITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQMPVMTGFEVVRRLDGPPLPV
IVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAAVLLNRPIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYV
LLDADEVLAFQAERELVWIITAKQRLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSNGLQLV
VSKRQAHKIRDLLQT
>Mature_255_residues
MDQRRITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQMPVMTGFEVVRRLDGPPLPV
IVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAAVLLNRPIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYV
LLDADEVLAFQAERELVWIITAKQRLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSNGLQLV
VSKRQAHKIRDLLQT

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=247, Percent_Identity=34.412955465587, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788724, Length=248, Percent_Identity=21.7741935483871, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788550, Length=125, Percent_Identity=36, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28579; Mature: 28579

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRRITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQ
CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEC
MPVMTGFEVVRRLDGPPLPVIVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAA
CHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VLLNRPIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYVLLDADEVLAFQAERELVWII
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHEECCCCEEEEE
TAKQRLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSNGLQLV
ECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHEE
VSKRQAHKIRDLLQT
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQRRITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQ
CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEC
MPVMTGFEVVRRLDGPPLPVIVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAA
CHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VLLNRPIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYVLLDADEVLAFQAERELVWII
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHEECCCCEEEEE
TAKQRLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSNGLQLV
ECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHEE
VSKRQAHKIRDLLQT
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA