| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620222
Identifier: 116620222
GI number: 116620222
Start: 1350745
End: 1351830
Strand: Direct
Name: 116620222
Synonym: Acid_1099
Alternate gene names: NA
Gene position: 1350745-1351830 (Clockwise)
Preceding gene: 116620221
Following gene: 116620223
Centisome position: 13.55
GC content: 62.06
Gene sequence:
>1086_bases ATGCCGTTTTCCCCTCTGCAGCAGCGAGCGGCCACGATCCTGCTCGCAGTCGCCGGCTTCATTGCCTTGGACGGGATGGT CTTTCGCACGGGCCTCTATACTTCGATCCTCGAGCCTGATTCCTCCACCGGCACCTTCGAATTGATTTTGCGCCGCGAGC AGCGCGCGCAATCCAGTTACGGATCGAATCTGATCGTGACGCTGGGCGATTCGCGCTTCGCCTATTATCCCCGCGTCGCC AATCAGCACGCCGCCGAGAATGGATTCTTCTTCCGCCAGGCCGGTGTCGCCGGTACCGACGCCCGTGCCTGGTATTACAT GCTGCGCGACCTCGACCCCACCCGCCGCCGCTATCGCGCCGTAGTCTTCGGCGTCGAAGACTACGACGACGAGGATGGCG CCTACGACGTCGGCGACGATCTCGCCACCCTTCACTATTGCGCGGCGCGCCTGCGCTATAGCGACGTCATCCCCTTCGCC CGCTCCTTCGACAGCCGTCCCGTGCAGTGGGAGGCATTCCGCGGTAGCCTGCTGAGGGGCCTCGTCTTCCAGCGCGATAT CCTGGCCTTCGCCTCGCACCCCGTGAAGCGCATCGAATACGTGCAGTTGGTCAATCGCGGCTTCGAGGAATGGACCTACG GCTACGTCGATTCGAAGAAGAATGTGGTCGGTCTCAAGATCGATTGGAACACCTTGACCGCCACCATGCCTCCGGGCAAC GAGGCGGTCATGGACCAGCTCACCCGCTTCGTGCTCTACCGTTCCAATCCGCAGACCGGACACCATGCCGCTTTCCGCCG CAAGTGGTTCGGCCGTCTGCTGGATTACTACAGCGGCACTCCGACCAAAATGATCTTCATACGCCTGCCGCGCGGCCCCA TTCCGCGGCCCGATTACCTGGTGCACAAGCTCAGCAGCTCAATCCGTGAATTCGCGTCGCGTCCGAACGTCATGCTGGTC GATGAACATGCCTTCGATTCGCTCGAGACTCCCGAGCTCTTCAAGGACGCCTTCCACTTGAACGACGCGGGCTGTTCGCG ACTCTCGGAGATGATGGCGCGCGAAGTCAGCAGGCTGGTGCGCTGA
Upstream 100 bases:
>100_bases TGTCGATCGCCCCGCCCGCCTCCTCGACATCGATTACCCCGAGTGGCGGAAAAAACACTAATCAGCCCTGACTGCCGCCT GTTAAAATTGTCATCTCCCG
Downstream 100 bases:
>100_bases TGCTCTTCAACACCACCCAGTTCTTCGTTTTTCTCGCCGTGGTGCTGGCGCTCTTCTACTTGAGCCCGCGCGGCCTGCGC AAGTACATCCTGCTGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MPFSPLQQRAATILLAVAGFIALDGMVFRTGLYTSILEPDSSTGTFELILRREQRAQSSYGSNLIVTLGDSRFAYYPRVA NQHAAENGFFFRQAGVAGTDARAWYYMLRDLDPTRRRYRAVVFGVEDYDDEDGAYDVGDDLATLHYCAARLRYSDVIPFA RSFDSRPVQWEAFRGSLLRGLVFQRDILAFASHPVKRIEYVQLVNRGFEEWTYGYVDSKKNVVGLKIDWNTLTATMPPGN EAVMDQLTRFVLYRSNPQTGHHAAFRRKWFGRLLDYYSGTPTKMIFIRLPRGPIPRPDYLVHKLSSSIREFASRPNVMLV DEHAFDSLETPELFKDAFHLNDAGCSRLSEMMAREVSRLVR
Sequences:
>Translated_361_residues MPFSPLQQRAATILLAVAGFIALDGMVFRTGLYTSILEPDSSTGTFELILRREQRAQSSYGSNLIVTLGDSRFAYYPRVA NQHAAENGFFFRQAGVAGTDARAWYYMLRDLDPTRRRYRAVVFGVEDYDDEDGAYDVGDDLATLHYCAARLRYSDVIPFA RSFDSRPVQWEAFRGSLLRGLVFQRDILAFASHPVKRIEYVQLVNRGFEEWTYGYVDSKKNVVGLKIDWNTLTATMPPGN EAVMDQLTRFVLYRSNPQTGHHAAFRRKWFGRLLDYYSGTPTKMIFIRLPRGPIPRPDYLVHKLSSSIREFASRPNVMLV DEHAFDSLETPELFKDAFHLNDAGCSRLSEMMAREVSRLVR >Mature_360_residues PFSPLQQRAATILLAVAGFIALDGMVFRTGLYTSILEPDSSTGTFELILRREQRAQSSYGSNLIVTLGDSRFAYYPRVAN QHAAENGFFFRQAGVAGTDARAWYYMLRDLDPTRRRYRAVVFGVEDYDDEDGAYDVGDDLATLHYCAARLRYSDVIPFAR SFDSRPVQWEAFRGSLLRGLVFQRDILAFASHPVKRIEYVQLVNRGFEEWTYGYVDSKKNVVGLKIDWNTLTATMPPGNE AVMDQLTRFVLYRSNPQTGHHAAFRRKWFGRLLDYYSGTPTKMIFIRLPRGPIPRPDYLVHKLSSSIREFASRPNVMLVD EHAFDSLETPELFKDAFHLNDAGCSRLSEMMAREVSRLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41337; Mature: 41206
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSPLQQRAATILLAVAGFIALDGMVFRTGLYTSILEPDSSTGTFELILRREQRAQSSY CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC GSNLIVTLGDSRFAYYPRVANQHAAENGFFFRQAGVAGTDARAWYYMLRDLDPTRRRYRA CCEEEEEECCCCEEECCCHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHEEE VVFGVEDYDDEDGAYDVGDDLATLHYCAARLRYSDVIPFARSFDSRPVQWEAFRGSLLRG EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHH LVFQRDILAFASHPVKRIEYVQLVNRGFEEWTYGYVDSKKNVVGLKIDWNTLTATMPPGN HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCEECCCCCEEEEEEECCEEEEECCCCC EAVMDQLTRFVLYRSNPQTGHHAAFRRKWFGRLLDYYSGTPTKMIFIRLPRGPIPRPDYL HHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH VHKLSSSIREFASRPNVMLVDEHAFDSLETPELFKDAFHLNDAGCSRLSEMMAREVSRLV HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC R C >Mature Secondary Structure PFSPLQQRAATILLAVAGFIALDGMVFRTGLYTSILEPDSSTGTFELILRREQRAQSSY CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC GSNLIVTLGDSRFAYYPRVANQHAAENGFFFRQAGVAGTDARAWYYMLRDLDPTRRRYRA CCEEEEEECCCCEEECCCHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHEEE VVFGVEDYDDEDGAYDVGDDLATLHYCAARLRYSDVIPFARSFDSRPVQWEAFRGSLLRG EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHH LVFQRDILAFASHPVKRIEYVQLVNRGFEEWTYGYVDSKKNVVGLKIDWNTLTATMPPGN HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCEECCCCCEEEEEEECCEEEEECCCCC EAVMDQLTRFVLYRSNPQTGHHAAFRRKWFGRLLDYYSGTPTKMIFIRLPRGPIPRPDYL HHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH VHKLSSSIREFASRPNVMLVDEHAFDSLETPELFKDAFHLNDAGCSRLSEMMAREVSRLV HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA