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The map label for this gene is 116620218

Identifier: 116620218

GI number: 116620218

Start: 1346890

End: 1347594

Strand: Direct

Name: 116620218

Synonym: Acid_1095

Alternate gene names: NA

Gene position: 1346890-1347594 (Clockwise)

Preceding gene: 116620212

Following gene: 116620219

Centisome position: 13.52

GC content: 68.51

Gene sequence:

>705_bases
ATGACCTGCGAAGAAGCCCATACTTACCTCTCCGCGCACCTGGATGACGAGTTGGATGTCGCCACGAGCCTCGAGATGGA
GCGCCACCTGGCCGCGTGCCCGAATTGCAGGCGCGCCCACGCCGCCAACCTTGCGCTCCGCGATGCGATCCGCGGGGCAG
ACCTTTACTACGAGCCCCCGCCGCACCTGGCGAAGAAGATCCGTGCCGCCGTGGCGCCGCCCAGCCGGTTCGCCTGGCGC
TGGCCGGCCGTCGCCGCGCTCGCGGCCGCGGCCGCCCTTTTCGCCGTCCTCTGGCTGCGTTCCAACTCCGAGCCGCGCCT
AGTGGCCGAAGTTGTCGCCAGCCACGTCCGCTCCCTCCAGGCCGGCCACCTGGTGGACGTCCCATCGTCGGACCGCCACA
CCGTGAAGCCCTGGTTCCAGGGCAAGCTCGATTTTTCGCCGCCCGTCCCCGATATCCCGGAGTTGGTCGGCGGCCGTCTC
GACTACCTCAACGGCCGCCCCGTCGCCGCCCTGGTCTACCAGCGCCGCCGCCACCAGATCAACGTCTTCGTCTGGCCATC
CCCCGCCACCGCGCCACTATCGCTGCACTCCACCAATGGCTACCAGGTCGTCCATTGGTCCACCGCCGGCATGGAGTGGT
GGGCCGTCTCCGACATGAACGGCCCGGAGTTAATGGACTTCGCGAAGGCCACCATGAGCCACTAA

Upstream 100 bases:

>100_bases
TCACCGGCGCCCCGCTGGGTACCGTGATGTCGCGGCTCTCGCGCGGCCGGGATTGGTTGAAGCGGCTGCTCACTCCAAGC
GGAAAGGAGGCGGTGGAACC

Downstream 100 bases:

>100_bases
TAACCCGTCTTTGTTTTAGACACGGCCCATGTTAATTCGTCGCCTACAGGTTTCCTTCCAGGAATTTATCCGCGGCTGAC
CTTGTCTTGCCTATCAGGAG

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Protein

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTCEEAHTYLSAHLDDELDVATSLEMERHLAACPNCRRAHAANLALRDAIRGADLYYEPPPHLAKKIRAAVAPPSRFAWR
WPAVAALAAAAALFAVLWLRSNSEPRLVAEVVASHVRSLQAGHLVDVPSSDRHTVKPWFQGKLDFSPPVPDIPELVGGRL
DYLNGRPVAALVYQRRRHQINVFVWPSPATAPLSLHSTNGYQVVHWSTAGMEWWAVSDMNGPELMDFAKATMSH

Sequences:

>Translated_234_residues
MTCEEAHTYLSAHLDDELDVATSLEMERHLAACPNCRRAHAANLALRDAIRGADLYYEPPPHLAKKIRAAVAPPSRFAWR
WPAVAALAAAAALFAVLWLRSNSEPRLVAEVVASHVRSLQAGHLVDVPSSDRHTVKPWFQGKLDFSPPVPDIPELVGGRL
DYLNGRPVAALVYQRRRHQINVFVWPSPATAPLSLHSTNGYQVVHWSTAGMEWWAVSDMNGPELMDFAKATMSH
>Mature_233_residues
TCEEAHTYLSAHLDDELDVATSLEMERHLAACPNCRRAHAANLALRDAIRGADLYYEPPPHLAKKIRAAVAPPSRFAWRW
PAVAALAAAAALFAVLWLRSNSEPRLVAEVVASHVRSLQAGHLVDVPSSDRHTVKPWFQGKLDFSPPVPDIPELVGGRLD
YLNGRPVAALVYQRRRHQINVFVWPSPATAPLSLHSTNGYQVVHWSTAGMEWWAVSDMNGPELMDFAKATMSH

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25920; Mature: 25789

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCEEAHTYLSAHLDDELDVATSLEMERHLAACPNCRRAHAANLALRDAIRGADLYYEPP
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PHLAKKIRAAVAPPSRFAWRWPAVAALAAAAALFAVLWLRSNSEPRLVAEVVASHVRSLQ
HHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
AGHLVDVPSSDRHTVKPWFQGKLDFSPPVPDIPELVGGRLDYLNGRPVAALVYQRRRHQI
CCCEEECCCCCCCEECHHHCCCCCCCCCCCCCHHHHCCCEECCCCCCHHHHHHHHHCCEE
NVFVWPSPATAPLSLHSTNGYQVVHWSTAGMEWWAVSDMNGPELMDFAKATMSH
EEEEECCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TCEEAHTYLSAHLDDELDVATSLEMERHLAACPNCRRAHAANLALRDAIRGADLYYEPP
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PHLAKKIRAAVAPPSRFAWRWPAVAALAAAAALFAVLWLRSNSEPRLVAEVVASHVRSLQ
HHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
AGHLVDVPSSDRHTVKPWFQGKLDFSPPVPDIPELVGGRLDYLNGRPVAALVYQRRRHQI
CCCEEECCCCCCCEECHHHCCCCCCCCCCCCCHHHHCCCEECCCCCCHHHHHHHHHCCEE
NVFVWPSPATAPLSLHSTNGYQVVHWSTAGMEWWAVSDMNGPELMDFAKATMSH
EEEEECCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA