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The map label for this gene is exeD [H]

Identifier: 116620187

GI number: 116620187

Start: 1310909

End: 1313527

Strand: Direct

Name: exeD [H]

Synonym: Acid_1060

Alternate gene names: 116620187

Gene position: 1310909-1313527 (Clockwise)

Preceding gene: 116620185

Following gene: 116620188

Centisome position: 13.15

GC content: 62.2

Gene sequence:

>2619_bases
ATGCGCGCAACCACTTTCTTTTTCAATCAGTTAACCGCGGTAGTTTTGACCGCTGCCTTGCTCGGACCGATGCTGCCGCT
AGAGGCGCGGACCAAGCGGGGCGACAAATTCCTCGCCGAGGGGCGGGCCGCCGAACAGAAAAAGGATTGGGACACCGCGC
TTTCGTCTTACGAAAAAGCGCTCTCCGAAGATCCGGGCGATATTCTCTACCAAATGGCAAGTGAGAAGGCGCGTTTCCAG
ACGGCGCAGTCTCACATCGACAGGGGACTCCGCGTCCGCTCGCAGGGATTGCTGGGTCAGGCGCTGGTCGAATTTCAAAA
GGCCTATGCGATCAACCCTGGTTCGGCGGTGGCCGAGCAGGAGATCCGCCGCACCACGGAGATGATCGACCGCGAGCGCA
AGCGCGTGCAGGAGACGGGGAAGGAAGACGATGCCAAAGAGCGGGCCCTGACACCCGGCGATCAGATGAAGCGCGATACC
GAGCAGCGCATTTCGAGCATCTTGCCGGTGCCGGACCTGAAGCCGCTGAATCCGGAGCCGATTCACCTGCGGCTCAATGG
GTCCACCAAGCTGCTGTTCGAAACCGTGGCCAAAGTGGCCAACATCAACGTCGTTTGGGATCCGGAATATCAGCCGCAGG
TGCGTGGCAACATCCCGGTGGAATTCGACAATTCCACGATCGAAGAGGCGCTGGATTACCTGAGCGTGATCACCAAATCC
TATTGGAAGCCGCTCTCGCCGAACACCATCTTCATCACGATGGACAATCCTAACAAGCGTCGCGATTACGAAGAGCAGGT
CGCCAAGGTTTTTTACCTGTCGAACGTGAACACTCCGCAGGAATTGCAGGAAATCGTGAACGCGGTGCGCTCGATCGCCG
ATATCCAGCGGTTCTTTCCGTATAACTCACAGAACGCCATCATCGCCAAGGGAAGCGCCGACCAGGTAGCGCTGGCCGAA
AAGATCCTGCACGATCTGGATAAACCGAAAAGCGAAGTCGTGGTGGACATCATCGTGATGGAAGCGAGTTCGGTGTACAC
CCGCCAGTTGACCGCAGCGATCGCGGCTCAGGGACTCAACGTCGGTGTGAACTTCACGCCGCGCTCCGGATTGCAGGTGG
TCAACAACCCGACCACCACCGGTGGAACCACCACGTCGGGCACCGGTACTGGAACCGCGACCGGCACCGGGACAGGCACG
GGTACCGGCACCGGCACCGGCACGAGCAGCGTCAGCGGCTCGGCGATTCCACTCTCCAATTTGGGCCATCTCTCGAGCGC
CGATTTTTCGACTACGATTCCGGCTGCCACGCTGCAACTGGTGCTGAGCGACGGCAACACAAAGGTGTTGCAGTCTCCGC
AACTGCGCGCGGTGGATAATGTGAAGGCGACGCTGAAGATCGGCGACCGCCAGCCAACCGCGACGGGCAGCTTCCAGCCC
GGCATCGGCGGCGTCGGCATCAATCCGCTGGTCAACACGCAGTTCACCTACATCGATGTGGGCGTCAACGTGGAACTGAC
GCCGCGCGTGCACGATAACGGCGACGTTTCGATGCACATCGATCTGGATATATCGAGCGTCACCGGCCATGTGAATCTCG
GCGGAATCGATCAGCCGATCATCGGACAGCGCAAAGTTTCGCACGACATCCGCATGCATGAAGGCTCCGTGCAATTGCTG
GCCGGGCTGACCAAATGGCAGGACACGAAGACCAAGACCGGAATTCCCGGGCTCGCCAACGTGCCGATTATCGGGCGCCT
CTTCAGCGGAGAGAGTGTGGACCGTGAGCGCCAGGAACTGATGATCGCGCTGATTCCGCACATCGTGCGCCGGCCGGATT
ACACGGCGGAGAATCTGCGCGGGATCGCGGTCGGCAACCAGGCGTCGGTCCATCTGAACTACGGACGCCGTCCATCGGCG
GATGGCGCGGCAGCGGTTCCGCCGGCGGCGCTTCCCAAGAACTCGGAACCCGTGCCCCCGGCGTCTTCGCCCGCGGCGGC
TGCGCCCGCGGCGATCGCGCCCACCGCTCCTACACCCCCGGCGCCCCTTGGACTGCAGCCCGGTGCGCCGATGCCGGTAC
CCCAGCCCGCGGCGCCAGCTTCGAGCGCTCCAGCGCTGGCGCCACCCGCGACCGCGCCGCCGATGACGGCTCCAGGCGCT
ACCGCACCGGAGGCCCCCAAACCGGATGCGGCCAAGCCGGTGGGCAACGCGACGGTACGCTTCCTGCCGCCGCAGGTCGA
GACCAATCCGCAGGGGATGATGACGATCGCGCTGATCATCGAGAATGCCACCGATGTCGCATCGGCGCCGATTCAGGTGG
CGTTCGATAACAAGGTGGTCAAGCTCAACGATGTGGGCCGCGGTGATTTCTTCTCCGGCGACGGGCAGATTCCGGTGTTC
ACGAAGAACATCCAGAATGATGCCGGTGCGGCGGCGGTGAACCTCAATCGCCTGCCCGGCACTCCCGGCTCCAGCGGCTC
CGGCGTTCTGGCGACTTTCATTTTCCAGGGCGTTGCCAAGGGGACTTCGACGGTCACAGTGCCCAACCTGACGGTTCGCA
ATGCACAGGGACAGGTCGTCTTCTCTGGCAGCCCGCAGACCACGATCACCGTAAAATAG

Upstream 100 bases:

>100_bases
ACCTCAACGCGTGGAAGCCCAACGGCGTCAATAGCTTTAGATGATCGCCGATCGGAAGTTGAAACCCATCTTATCACGAG
CTCTCTGCTCAAGGCCCTGA

Downstream 100 bases:

>100_bases
AGACGATATGAAGCGCCGCAGAAATCAGAGAGGACTGACGCTGGTGGAGTTGGTGGTGGCATTCACGATCATGCTGATCC
TCTCCGGCATGGCGGTGCCG

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 872; Mature: 872

Protein sequence:

>872_residues
MRATTFFFNQLTAVVLTAALLGPMLPLEARTKRGDKFLAEGRAAEQKKDWDTALSSYEKALSEDPGDILYQMASEKARFQ
TAQSHIDRGLRVRSQGLLGQALVEFQKAYAINPGSAVAEQEIRRTTEMIDRERKRVQETGKEDDAKERALTPGDQMKRDT
EQRISSILPVPDLKPLNPEPIHLRLNGSTKLLFETVAKVANINVVWDPEYQPQVRGNIPVEFDNSTIEEALDYLSVITKS
YWKPLSPNTIFITMDNPNKRRDYEEQVAKVFYLSNVNTPQELQEIVNAVRSIADIQRFFPYNSQNAIIAKGSADQVALAE
KILHDLDKPKSEVVVDIIVMEASSVYTRQLTAAIAAQGLNVGVNFTPRSGLQVVNNPTTTGGTTTSGTGTGTATGTGTGT
GTGTGTGTSSVSGSAIPLSNLGHLSSADFSTTIPAATLQLVLSDGNTKVLQSPQLRAVDNVKATLKIGDRQPTATGSFQP
GIGGVGINPLVNTQFTYIDVGVNVELTPRVHDNGDVSMHIDLDISSVTGHVNLGGIDQPIIGQRKVSHDIRMHEGSVQLL
AGLTKWQDTKTKTGIPGLANVPIIGRLFSGESVDRERQELMIALIPHIVRRPDYTAENLRGIAVGNQASVHLNYGRRPSA
DGAAAVPPAALPKNSEPVPPASSPAAAAPAAIAPTAPTPPAPLGLQPGAPMPVPQPAAPASSAPALAPPATAPPMTAPGA
TAPEAPKPDAAKPVGNATVRFLPPQVETNPQGMMTIALIIENATDVASAPIQVAFDNKVVKLNDVGRGDFFSGDGQIPVF
TKNIQNDAGAAAVNLNRLPGTPGSSGSGVLATFIFQGVAKGTSTVTVPNLTVRNAQGQVVFSGSPQTTITVK

Sequences:

>Translated_872_residues
MRATTFFFNQLTAVVLTAALLGPMLPLEARTKRGDKFLAEGRAAEQKKDWDTALSSYEKALSEDPGDILYQMASEKARFQ
TAQSHIDRGLRVRSQGLLGQALVEFQKAYAINPGSAVAEQEIRRTTEMIDRERKRVQETGKEDDAKERALTPGDQMKRDT
EQRISSILPVPDLKPLNPEPIHLRLNGSTKLLFETVAKVANINVVWDPEYQPQVRGNIPVEFDNSTIEEALDYLSVITKS
YWKPLSPNTIFITMDNPNKRRDYEEQVAKVFYLSNVNTPQELQEIVNAVRSIADIQRFFPYNSQNAIIAKGSADQVALAE
KILHDLDKPKSEVVVDIIVMEASSVYTRQLTAAIAAQGLNVGVNFTPRSGLQVVNNPTTTGGTTTSGTGTGTATGTGTGT
GTGTGTGTSSVSGSAIPLSNLGHLSSADFSTTIPAATLQLVLSDGNTKVLQSPQLRAVDNVKATLKIGDRQPTATGSFQP
GIGGVGINPLVNTQFTYIDVGVNVELTPRVHDNGDVSMHIDLDISSVTGHVNLGGIDQPIIGQRKVSHDIRMHEGSVQLL
AGLTKWQDTKTKTGIPGLANVPIIGRLFSGESVDRERQELMIALIPHIVRRPDYTAENLRGIAVGNQASVHLNYGRRPSA
DGAAAVPPAALPKNSEPVPPASSPAAAAPAAIAPTAPTPPAPLGLQPGAPMPVPQPAAPASSAPALAPPATAPPMTAPGA
TAPEAPKPDAAKPVGNATVRFLPPQVETNPQGMMTIALIIENATDVASAPIQVAFDNKVVKLNDVGRGDFFSGDGQIPVF
TKNIQNDAGAAAVNLNRLPGTPGSSGSGVLATFIFQGVAKGTSTVTVPNLTVRNAQGQVVFSGSPQTTITVK
>Mature_872_residues
MRATTFFFNQLTAVVLTAALLGPMLPLEARTKRGDKFLAEGRAAEQKKDWDTALSSYEKALSEDPGDILYQMASEKARFQ
TAQSHIDRGLRVRSQGLLGQALVEFQKAYAINPGSAVAEQEIRRTTEMIDRERKRVQETGKEDDAKERALTPGDQMKRDT
EQRISSILPVPDLKPLNPEPIHLRLNGSTKLLFETVAKVANINVVWDPEYQPQVRGNIPVEFDNSTIEEALDYLSVITKS
YWKPLSPNTIFITMDNPNKRRDYEEQVAKVFYLSNVNTPQELQEIVNAVRSIADIQRFFPYNSQNAIIAKGSADQVALAE
KILHDLDKPKSEVVVDIIVMEASSVYTRQLTAAIAAQGLNVGVNFTPRSGLQVVNNPTTTGGTTTSGTGTGTATGTGTGT
GTGTGTGTSSVSGSAIPLSNLGHLSSADFSTTIPAATLQLVLSDGNTKVLQSPQLRAVDNVKATLKIGDRQPTATGSFQP
GIGGVGINPLVNTQFTYIDVGVNVELTPRVHDNGDVSMHIDLDISSVTGHVNLGGIDQPIIGQRKVSHDIRMHEGSVQLL
AGLTKWQDTKTKTGIPGLANVPIIGRLFSGESVDRERQELMIALIPHIVRRPDYTAENLRGIAVGNQASVHLNYGRRPSA
DGAAAVPPAALPKNSEPVPPASSPAAAAPAAIAPTAPTPPAPLGLQPGAPMPVPQPAAPASSAPALAPPATAPPMTAPGA
TAPEAPKPDAAKPVGNATVRFLPPQVETNPQGMMTIALIIENATDVASAPIQVAFDNKVVKLNDVGRGDFFSGDGQIPVF
TKNIQNDAGAAAVNLNRLPGTPGSSGSGVLATFIFQGVAKGTSTVTVPNLTVRNAQGQVVFSGSPQTTITVK

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 92301; Mature: 92301

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATTFFFNQLTAVVLTAALLGPMLPLEARTKRGDKFLAEGRAAEQKKDWDTALSSYEKA
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHH
LSEDPGDILYQMASEKARFQTAQSHIDRGLRVRSQGLLGQALVEFQKAYAINPGSAVAEQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHCCHHHHHHHHHHHHHCCCCCHHHHHH
EIRRTTEMIDRERKRVQETGKEDDAKERALTPGDQMKRDTEQRISSILPVPDLKPLNPEP
HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
IHLRLNGSTKLLFETVAKVANINVVWDPEYQPQVRGNIPVEFDNSTIEEALDYLSVITKS
EEEEECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
YWKPLSPNTIFITMDNPNKRRDYEEQVAKVFYLSNVNTPQELQEIVNAVRSIADIQRFFP
HCCCCCCCEEEEEECCCCCCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
YNSQNAIIAKGSADQVALAEKILHDLDKPKSEVVVDIIVMEASSVYTRQLTAAIAAQGLN
CCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHEEEEEEEECCCHHHHHHHHHHHHHCCCE
VGVNFTPRSGLQVVNNPTTTGGTTTSGTGTGTATGTGTGTGTGTGTGTSSVSGSAIPLSN
ECEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
LGHLSSADFSTTIPAATLQLVLSDGNTKVLQSPQLRAVDNVKATLKIGDRQPTATGSFQP
CCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEECCCCEEEEEECCCCCCCCCCCCC
GIGGVGINPLVNTQFTYIDVGVNVELTPRVHDNGDVSMHIDLDISSVTGHVNLGGIDQPI
CCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEEEEEHEECEEEECCCCCCC
IGQRKVSHDIRMHEGSVQLLAGLTKWQDTKTKTGIPGLANVPIIGRLFSGESVDRERQEL
CCCHHHCCHHEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH
MIALIPHIVRRPDYTAENLRGIAVGNQASVHLNYGRRPSADGAAAVPPAALPKNSEPVPP
HHHHHHHHHCCCCCCHHHCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
ASSPAAAAPAAIAPTAPTPPAPLGLQPGAPMPVPQPAAPASSAPALAPPATAPPMTAPGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAPEAPKPDAAKPVGNATVRFLPPQVETNPQGMMTIALIIENATDVASAPIQVAFDNKVV
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCHHHCCCCEEEEECCEEE
KLNDVGRGDFFSGDGQIPVFTKNIQNDAGAAAVNLNRLPGTPGSSGSGVLATFIFQGVAK
EEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHC
GTSTVTVPNLTVRNAQGQVVFSGSPQTTITVK
CCCEEEECCEEEECCCCEEEECCCCCEEEEEC
>Mature Secondary Structure
MRATTFFFNQLTAVVLTAALLGPMLPLEARTKRGDKFLAEGRAAEQKKDWDTALSSYEKA
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHH
LSEDPGDILYQMASEKARFQTAQSHIDRGLRVRSQGLLGQALVEFQKAYAINPGSAVAEQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHCCHHHHHHHHHHHHHCCCCCHHHHHH
EIRRTTEMIDRERKRVQETGKEDDAKERALTPGDQMKRDTEQRISSILPVPDLKPLNPEP
HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
IHLRLNGSTKLLFETVAKVANINVVWDPEYQPQVRGNIPVEFDNSTIEEALDYLSVITKS
EEEEECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
YWKPLSPNTIFITMDNPNKRRDYEEQVAKVFYLSNVNTPQELQEIVNAVRSIADIQRFFP
HCCCCCCCEEEEEECCCCCCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
YNSQNAIIAKGSADQVALAEKILHDLDKPKSEVVVDIIVMEASSVYTRQLTAAIAAQGLN
CCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHEEEEEEEECCCHHHHHHHHHHHHHCCCE
VGVNFTPRSGLQVVNNPTTTGGTTTSGTGTGTATGTGTGTGTGTGTGTSSVSGSAIPLSN
ECEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
LGHLSSADFSTTIPAATLQLVLSDGNTKVLQSPQLRAVDNVKATLKIGDRQPTATGSFQP
CCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEECCCCEEEEEECCCCCCCCCCCCC
GIGGVGINPLVNTQFTYIDVGVNVELTPRVHDNGDVSMHIDLDISSVTGHVNLGGIDQPI
CCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEEEEEHEECEEEECCCCCCC
IGQRKVSHDIRMHEGSVQLLAGLTKWQDTKTKTGIPGLANVPIIGRLFSGESVDRERQEL
CCCHHHCCHHEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH
MIALIPHIVRRPDYTAENLRGIAVGNQASVHLNYGRRPSADGAAAVPPAALPKNSEPVPP
HHHHHHHHHCCCCCCHHHCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
ASSPAAAAPAAIAPTAPTPPAPLGLQPGAPMPVPQPAAPASSAPALAPPATAPPMTAPGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAPEAPKPDAAKPVGNATVRFLPPQVETNPQGMMTIALIIENATDVASAPIQVAFDNKVV
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCHHHCCCCEEEEECCEEE
KLNDVGRGDFFSGDGQIPVFTKNIQNDAGAAAVNLNRLPGTPGSSGSGVLATFIFQGVAK
EEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHC
GTSTVTVPNLTVRNAQGQVVFSGSPQTTITVK
CCCEEEECCEEEECCCCEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]