| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yegU [C]
Identifier: 116620181
GI number: 116620181
Start: 1303431
End: 1304345
Strand: Direct
Name: yegU [C]
Synonym: Acid_1054
Alternate gene names: 116620181
Gene position: 1303431-1304345 (Clockwise)
Preceding gene: 116620180
Following gene: 116620182
Centisome position: 13.08
GC content: 66.56
Gene sequence:
>915_bases ATGCCCGGGCGACTAGAGGAACGGGTGATCGGGTGCTTCGCGGGCGTGGCGACCGGCGATGCCATCGGGAAGCAGACGGA AACTTTGTCGCGGGCCGAAGTTCAGCAATGGTATCCCGGAGGAATCACGGGCTTTCACGGACGGCCCGGAGACGTGATTC CGCGCTATGTGGGGAAGCGGTACGAGTGGCGGATCGGGGAGACCACGGACGACACGGAACAGACGCTGGCGGTGGCGCGC GCGCTCTTGAGTGAGGGACGGGCCAGCCACACAGCGATCGGACGGGAGCTTCTGGGGTGCCGGAAATCGGCGCATCCGGG AGTCTCGTTGTGGAAGCTGCTGGAAAGCGGCGAGCCGGGACGCGTAGCGACGGACGGGGACGGCTGCGGAGCAGCGATGC GCGCCGCGCCGATTGGGGTGATGTATCCGGTGAGCCGGCTGGACGAACTGGTCCAGTCTGCGTACGAGTGTGCAGTACCG ACTCACGGAGGGCAACTGGCGATCAGCGGGGCTGCGGCGGTCGCGGGCGCGGTCTCGGCGGCGCTGGAGGATTTGGCCGG CGACGAACTGGTGGCGGTGGCGGTACGAGCGGCGAAGGGAGCGATGGCGGACGCGATCGAGCGGGCTTACTCGGACCTGA AGGTAGATGAGCTGGCTCCTCCGCTCGAAGTTCGGACGATCGTGCCGCTGGCGATCAGCCTGGCGGTGACTACAGGGTCG GCGGAGAAGACGGCACTGATCGCGGCGAATCTTGGGGGCGACGCGGACTCTGTCGCATCGATTGGCGGGGCAATCGCCGG TGCGCTGGCGCCGGAGACCGTGAACCAGGAATGGTTCGCGGTAGTGAAGGCGATCAACGGAGACGACATTCTAGGGGTGG CGAGGGCGTTGGCGGCGCTACACTATACAAGATGA
Upstream 100 bases:
>100_bases CTGCAGTCTGGTGGCATCCTGCTGCTTGGGCGGTGCCGGCGATGGTGGGGTGGATCTTCGGGGCACTGCTGATTACTCCT CGCGTCGTGCGGGCATAGGG
Downstream 100 bases:
>100_bases TCCCCGACGGCCTGACGAAACGCGTGCATGCGCTGCTTGGCCCGCGCGGGTATCTCGATCTTCCGGAAGACCTTAAGCTT TACGAGTACGATGGCGGCAT
Product: ADP-ribosylation/crystallin J1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPGRLEERVIGCFAGVATGDAIGKQTETLSRAEVQQWYPGGITGFHGRPGDVIPRYVGKRYEWRIGETTDDTEQTLAVAR ALLSEGRASHTAIGRELLGCRKSAHPGVSLWKLLESGEPGRVATDGDGCGAAMRAAPIGVMYPVSRLDELVQSAYECAVP THGGQLAISGAAAVAGAVSAALEDLAGDELVAVAVRAAKGAMADAIERAYSDLKVDELAPPLEVRTIVPLAISLAVTTGS AEKTALIAANLGGDADSVASIGGAIAGALAPETVNQEWFAVVKAINGDDILGVARALAALHYTR
Sequences:
>Translated_304_residues MPGRLEERVIGCFAGVATGDAIGKQTETLSRAEVQQWYPGGITGFHGRPGDVIPRYVGKRYEWRIGETTDDTEQTLAVAR ALLSEGRASHTAIGRELLGCRKSAHPGVSLWKLLESGEPGRVATDGDGCGAAMRAAPIGVMYPVSRLDELVQSAYECAVP THGGQLAISGAAAVAGAVSAALEDLAGDELVAVAVRAAKGAMADAIERAYSDLKVDELAPPLEVRTIVPLAISLAVTTGS AEKTALIAANLGGDADSVASIGGAIAGALAPETVNQEWFAVVKAINGDDILGVARALAALHYTR >Mature_303_residues PGRLEERVIGCFAGVATGDAIGKQTETLSRAEVQQWYPGGITGFHGRPGDVIPRYVGKRYEWRIGETTDDTEQTLAVARA LLSEGRASHTAIGRELLGCRKSAHPGVSLWKLLESGEPGRVATDGDGCGAAMRAAPIGVMYPVSRLDELVQSAYECAVPT HGGQLAISGAAAVAGAVSAALEDLAGDELVAVAVRAAKGAMADAIERAYSDLKVDELAPPLEVRTIVPLAISLAVTTGSA EKTALIAANLGGDADSVASIGGAIAGALAPETVNQEWFAVVKAINGDDILGVARALAALHYTR
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP-ribosylglycohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788416, Length=334, Percent_Identity=29.6407185628743, Blast_Score=88, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005502 [H]
Pfam domain/function: PF03747 ADP_ribosyl_GH [H]
EC number: 3.2.-.-
Molecular weight: Translated: 31307; Mature: 31176
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRLEERVIGCFAGVATGDAIGKQTETLSRAEVQQWYPGGITGFHGRPGDVIPRYVGKR CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC YEWRIGETTDDTEQTLAVARALLSEGRASHTAIGRELLGCRKSAHPGVSLWKLLESGEPG EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC RVATDGDGCGAAMRAAPIGVMYPVSRLDELVQSAYECAVPTHGGQLAISGAAAVAGAVSA CEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHH ALEDLAGDELVAVAVRAAKGAMADAIERAYSDLKVDELAPPLEVRTIVPLAISLAVTTGS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHEEEEEECCC AEKTALIAANLGGDADSVASIGGAIAGALAPETVNQEWFAVVKAINGDDILGVARALAAL CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH HYTR HCCC >Mature Secondary Structure PGRLEERVIGCFAGVATGDAIGKQTETLSRAEVQQWYPGGITGFHGRPGDVIPRYVGKR CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC YEWRIGETTDDTEQTLAVARALLSEGRASHTAIGRELLGCRKSAHPGVSLWKLLESGEPG EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC RVATDGDGCGAAMRAAPIGVMYPVSRLDELVQSAYECAVPTHGGQLAISGAAAVAGAVSA CEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHH ALEDLAGDELVAVAVRAAKGAMADAIERAYSDLKVDELAPPLEVRTIVPLAISLAVTTGS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHEEEEEECCC AEKTALIAANLGGDADSVASIGGAIAGALAPETVNQEWFAVVKAINGDDILGVARALAAL CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH HYTR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]