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The map label for this gene is recA [H]

Identifier: 116620140

GI number: 116620140

Start: 1259422

End: 1260489

Strand: Reverse

Name: recA [H]

Synonym: Acid_1013

Alternate gene names: 116620140

Gene position: 1260489-1259422 (Counterclockwise)

Preceding gene: 116620143

Following gene: 116620139

Centisome position: 12.65

GC content: 62.64

Gene sequence:

>1068_bases
ATGGATGAAAAGGAGCGCTCGCGCGCTTTAGAAACTGCACTCGGCCAGATTGAGAAGCAATTTGGCAAAGGCTCGATCCT
GCGTCTCGGATCGAAAGACGCCATTGTACCGGTCTCTGTGATTTCGACGGGCTCGATTTCGCTGGACGCTGCGCTGGGTG
TCGGCGGCTTTCCTCGCGGCCGTATTAACGAAATCTTCGGACCGGAATCGTCGGGTAAAACGACCATCGCGCTGCAGGTG
GTGGCGGAGGCACAGAAGGCCGGCGGGATCGCGGCGTTCATCGACGTGGAACACGCGCTGGACCCGACGTACGCGCGCAA
ACTCGGCGTGGACGTCGACAATCTGCTGGTGTCGCAGCCAGACTATGGCGAACAGGCGCTCGAGATCACGGCGCACCTGA
TCGCGTCCGGACAGATCGACGTGCTGGTGGTGGATTCGGTGGCGGCGCTGGTGCCGAAATCCGAGCTCGACGGCGAAATG
GGCGATAGCCACATGGGCGTGCAGGCGCGCCTGATGTCGCAGGCTCTGCGCAAACTGACCGGGTCGGTCAACAAGTCGCG
CACGTGCCTGATCTTCATCAACCAGATCCGCGAGAAGATCGGCGTGATGTTCGGCAATCCGGAAACCACTACGGGCGGCC
GCGCGCTGAAGTTTTATTCGACGGTAAGGCTCGACATCCGGCGCATCGGGGCCATTAAAGATGGCGACGCGGTGGTCGGC
AACCGCACCAAGGTCAAGGTGGTGAAGAACAAAGTCGCGTCGCCGTTCCGCGAGGCGGAGTTCGACATCATTTACGGCGA
AGGCGTCTCCAAGGAAGGCGACCTGCTCGATCTCGGGGTCGCGCAGAATCTGGTGGAGAAGAGCGGCTCGTGGTTCAGCT
ACAAGGGCGATCGCATCGGCCAGGGGCGCGAGAACGCGCGCCAGTTCCTCAAGGACAATCCCGACATCCGCAAGGCGGTC
GATACGGAACTGCGCAAGACGTTGGGCCTGGTGAAGAGCGACGCGGCTCCTGTGCCGCCGACTCCCGCTCCGGAACCTGC
GGCCGCCAAGCCGGCCGCACGCCGCTGA

Upstream 100 bases:

>100_bases
AGAAATCGCCAGGCCGCGGAGCGCCATCGAAACACCTCTTGCTTAATTATAGCGGCTGCTACAATGGCTCTTTACCCCCA
AACCAGGAGTCATTCCCGAC

Downstream 100 bases:

>100_bases
ATCAACGAGCCGCGACCGTAAGGGAGCATTACGCCCTGGGGTGCAGGGGTAGCGCTCCCTAACGGTCGCGGCTCGTTGTG
GCCAGTGGGTGACTCATGAG

Product: recA protein

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MDEKERSRALETALGQIEKQFGKGSILRLGSKDAIVPVSVISTGSISLDAALGVGGFPRGRINEIFGPESSGKTTIALQV
VAEAQKAGGIAAFIDVEHALDPTYARKLGVDVDNLLVSQPDYGEQALEITAHLIASGQIDVLVVDSVAALVPKSELDGEM
GDSHMGVQARLMSQALRKLTGSVNKSRTCLIFINQIREKIGVMFGNPETTTGGRALKFYSTVRLDIRRIGAIKDGDAVVG
NRTKVKVVKNKVASPFREAEFDIIYGEGVSKEGDLLDLGVAQNLVEKSGSWFSYKGDRIGQGRENARQFLKDNPDIRKAV
DTELRKTLGLVKSDAAPVPPTPAPEPAAAKPAARR

Sequences:

>Translated_355_residues
MDEKERSRALETALGQIEKQFGKGSILRLGSKDAIVPVSVISTGSISLDAALGVGGFPRGRINEIFGPESSGKTTIALQV
VAEAQKAGGIAAFIDVEHALDPTYARKLGVDVDNLLVSQPDYGEQALEITAHLIASGQIDVLVVDSVAALVPKSELDGEM
GDSHMGVQARLMSQALRKLTGSVNKSRTCLIFINQIREKIGVMFGNPETTTGGRALKFYSTVRLDIRRIGAIKDGDAVVG
NRTKVKVVKNKVASPFREAEFDIIYGEGVSKEGDLLDLGVAQNLVEKSGSWFSYKGDRIGQGRENARQFLKDNPDIRKAV
DTELRKTLGLVKSDAAPVPPTPAPEPAAAKPAARR
>Mature_355_residues
MDEKERSRALETALGQIEKQFGKGSILRLGSKDAIVPVSVISTGSISLDAALGVGGFPRGRINEIFGPESSGKTTIALQV
VAEAQKAGGIAAFIDVEHALDPTYARKLGVDVDNLLVSQPDYGEQALEITAHLIASGQIDVLVVDSVAALVPKSELDGEM
GDSHMGVQARLMSQALRKLTGSVNKSRTCLIFINQIREKIGVMFGNPETTTGGRALKFYSTVRLDIRRIGAIKDGDAVVG
NRTKVKVVKNKVASPFREAEFDIIYGEGVSKEGDLLDLGVAQNLVEKSGSWFSYKGDRIGQGRENARQFLKDNPDIRKAV
DTELRKTLGLVKSDAAPVPPTPAPEPAAAKPAARR

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=326, Percent_Identity=66.2576687116564, Blast_Score=455, Evalue=1e-129,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37959; Mature: 37959

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKERSRALETALGQIEKQFGKGSILRLGSKDAIVPVSVISTGSISLDAALGVGGFPRG
CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCEEEEHCCCCCCCCCC
RINEIFGPESSGKTTIALQVVAEAQKAGGIAAFIDVEHALDPTYARKLGVDVDNLLVSQP
CHHHHCCCCCCCCEEEEEEEEHHHHHCCCEEEEEEEHHHCCHHHHHHHCCCHHHHEECCC
DYGEQALEITAHLIASGQIDVLVVDSVAALVPKSELDGEMGDSHMGVQARLMSQALRKLT
CCCHHHHHHHHHHHCCCCEEEEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH
GSVNKSRTCLIFINQIREKIGVMFGNPETTTGGRALKFYSTVRLDIRRIGAIKDGDAVVG
CCCCCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEC
NRTKVKVVKNKVASPFREAEFDIIYGEGVSKEGDLLDLGVAQNLVEKSGSWFSYKGDRIG
CCEEEEEHHHHHCCCHHHCCEEEEECCCCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCC
QGRENARQFLKDNPDIRKAVDTELRKTLGLVKSDAAPVPPTPAPEPAAAKPAARR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDEKERSRALETALGQIEKQFGKGSILRLGSKDAIVPVSVISTGSISLDAALGVGGFPRG
CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCEEEEHCCCCCCCCCC
RINEIFGPESSGKTTIALQVVAEAQKAGGIAAFIDVEHALDPTYARKLGVDVDNLLVSQP
CHHHHCCCCCCCCEEEEEEEEHHHHHCCCEEEEEEEHHHCCHHHHHHHCCCHHHHEECCC
DYGEQALEITAHLIASGQIDVLVVDSVAALVPKSELDGEMGDSHMGVQARLMSQALRKLT
CCCHHHHHHHHHHHCCCCEEEEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH
GSVNKSRTCLIFINQIREKIGVMFGNPETTTGGRALKFYSTVRLDIRRIGAIKDGDAVVG
CCCCCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEC
NRTKVKVVKNKVASPFREAEFDIIYGEGVSKEGDLLDLGVAQNLVEKSGSWFSYKGDRIG
CCEEEEEHHHHHCCCHHHCCEEEEECCCCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCC
QGRENARQFLKDNPDIRKAVDTELRKTLGLVKSDAAPVPPTPAPEPAAAKPAARR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA