| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is mmlH [H]
Identifier: 116620125
GI number: 116620125
Start: 1239552
End: 1240829
Strand: Reverse
Name: mmlH [H]
Synonym: Acid_0998
Alternate gene names: 116620125
Gene position: 1240829-1239552 (Counterclockwise)
Preceding gene: 116620129
Following gene: 116620124
Centisome position: 12.45
GC content: 65.65
Gene sequence:
>1278_bases GTGCCCGAACGCCTCACTACCAATCAGATCCGCGGCTTTTGGGCCGCGTGGGCCGGTTGGGCGCTCGACGGCATGGATTC CTTCCTCTACGCCCTGGTCCTGGTGCCCGCCCTTCGCGATCTGCTGCCCCGCTCCGGCATCGCCGCCACGCAGGCCAACA TCGGCTACTACGGCGGAGTGCTCTTCGCCATTTTCCTGCTGGGCTGGGGCTTCGCCTTCCTCTGGGGCCCCCTCGCCGAT CGCTTCGGCCGTGTTCGCACGCTCGTCCTCACCATCGTCTGCTACTCGCTCTTCACCTTCCTCGGCTCCGCCGCCGCCAA CGTCTGGCAACTCGCCGCATTCCGCTTTCTCGCCGGCATCGGCATCGGCGGTGAATGGACCATCGGCGGAGTCTTCGTCG CCGAGGAATGGCCCGAATCCCGCCGAAAGAATGGCGCTGCCTGGATGCACACCGGCTACTACTTCGGCACCTTCCTCGCC GCCATCGTCAATTACACCGTGGGCTCGCACTATGGCTGGCGCGCCGTCTTCGCCGTCGGCGGCACTCCGGCCCTGCTCGT CGCCTTCATTCGCTACGGCGTTCGCGAATCCAAGCGCTGGGAGCAAGGCGTCGCAAAACGCCAAGATCGCTGGACCGCCC GCGACGCCTTCTTTGCCCTCTTCTCCGCCGAGTACCGCAATCGGACTGTCGTCAACGCCGCGCTGCTCTTCATCTCCATG GTCGGCCTCTGGGCCGGCTCCGCTTACGTGCCGTCCTCCATCACCTACCTGGCGGTACACGAAGGCTTTACGGCCGCCGA TGCCGCGCGTCTTGCATCATGGGCCATCATGCTGCTTTCCGCCGGCACAATCCTAGGCTGCCTCATGCTGCCCGCGCTTG CCGAGCGCCTCGGCCGCCGCGGAGCCCTCGCCTTCTACTTCCTGCTGATGTTTCTCTGCATCGCGCTCGGCTTCGGCTGG GTCTTTTACCGCGCGGCGAACGCGCTTCCCTGGTTTATGGCCTGCCTCTTCTTCCTCGGCATCGGCGGCGCCAATTTCTC GGTCTACACCCTGTGGCTGCCGGAGCAATACCGCACGGAATGCCGCGGCAGCGCCTTCGCCTTCGCCACTTCATTCGGCC GCTTCCTCGCCGCCGGGATCACTTTCCTGGTTGGCGCCGGAGTCGCCCGCATGCACACCATCGGCACTCCGGTCGCACTG ACTTGCATCGCCTTCCTGGTCGGACTGGCGCTGTTACCGCTCGCCGTGGAAACTAAAGGCAAGGAGCTGCCCGCGTGA
Upstream 100 bases:
>100_bases ACGTGGACTTGCCCGATCCCGGCAGCCCCACCAGCACCACAATGCGCATTCAGCAATCAGGATAGCGAAGTCCGCCGGTG GACCTGCTACCGTATTCTGA
Downstream 100 bases:
>100_bases ACCTCACGCATCTCTTCGATCTCTCCCTGTCCGGCCGCCGCGACACCGGCGCGCTCGAATTCCAGGACCGCTGCTACACG TTCGGCGAACTGGATTCACG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MPERLTTNQIRGFWAAWAGWALDGMDSFLYALVLVPALRDLLPRSGIAATQANIGYYGGVLFAIFLLGWGFAFLWGPLAD RFGRVRTLVLTIVCYSLFTFLGSAAANVWQLAAFRFLAGIGIGGEWTIGGVFVAEEWPESRRKNGAAWMHTGYYFGTFLA AIVNYTVGSHYGWRAVFAVGGTPALLVAFIRYGVRESKRWEQGVAKRQDRWTARDAFFALFSAEYRNRTVVNAALLFISM VGLWAGSAYVPSSITYLAVHEGFTAADAARLASWAIMLLSAGTILGCLMLPALAERLGRRGALAFYFLLMFLCIALGFGW VFYRAANALPWFMACLFFLGIGGANFSVYTLWLPEQYRTECRGSAFAFATSFGRFLAAGITFLVGAGVARMHTIGTPVAL TCIAFLVGLALLPLAVETKGKELPA
Sequences:
>Translated_425_residues MPERLTTNQIRGFWAAWAGWALDGMDSFLYALVLVPALRDLLPRSGIAATQANIGYYGGVLFAIFLLGWGFAFLWGPLAD RFGRVRTLVLTIVCYSLFTFLGSAAANVWQLAAFRFLAGIGIGGEWTIGGVFVAEEWPESRRKNGAAWMHTGYYFGTFLA AIVNYTVGSHYGWRAVFAVGGTPALLVAFIRYGVRESKRWEQGVAKRQDRWTARDAFFALFSAEYRNRTVVNAALLFISM VGLWAGSAYVPSSITYLAVHEGFTAADAARLASWAIMLLSAGTILGCLMLPALAERLGRRGALAFYFLLMFLCIALGFGW VFYRAANALPWFMACLFFLGIGGANFSVYTLWLPEQYRTECRGSAFAFATSFGRFLAAGITFLVGAGVARMHTIGTPVAL TCIAFLVGLALLPLAVETKGKELPA >Mature_424_residues PERLTTNQIRGFWAAWAGWALDGMDSFLYALVLVPALRDLLPRSGIAATQANIGYYGGVLFAIFLLGWGFAFLWGPLADR FGRVRTLVLTIVCYSLFTFLGSAAANVWQLAAFRFLAGIGIGGEWTIGGVFVAEEWPESRRKNGAAWMHTGYYFGTFLAA IVNYTVGSHYGWRAVFAVGGTPALLVAFIRYGVRESKRWEQGVAKRQDRWTARDAFFALFSAEYRNRTVVNAALLFISMV GLWAGSAYVPSSITYLAVHEGFTAADAARLASWAIMLLSAGTILGCLMLPALAERLGRRGALAFYFLLMFLCIALGFGWV FYRAANALPWFMACLFFLGIGGANFSVYTLWLPEQYRTECRGSAFAFATSFGRFLAAGITFLVGAGVARMHTIGTPVALT CIAFLVGLALLPLAVETKGKELPA
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082404, Length=313, Percent_Identity=26.8370607028754, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI87082231, Length=229, Percent_Identity=28.82096069869, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1790550, Length=334, Percent_Identity=25.4491017964072, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI87081723, Length=326, Percent_Identity=26.6871165644172, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46443; Mature: 46312
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERLTTNQIRGFWAAWAGWALDGMDSFLYALVLVPALRDLLPRSGIAATQANIGYYGGV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHH LFAIFLLGWGFAFLWGPLADRFGRVRTLVLTIVCYSLFTFLGSAAANVWQLAAFRFLAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIGGEWTIGGVFVAEEWPESRRKNGAAWMHTGYYFGTFLAAIVNYTVGSHYGWRAVFAVG CCCCCEEECCEEEECCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEC GTPALLVAFIRYGVRESKRWEQGVAKRQDRWTARDAFFALFSAEYRNRTVVNAALLFISM CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VGLWAGSAYVPSSITYLAVHEGFTAADAARLASWAIMLLSAGTILGCLMLPALAERLGRR HHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GALAFYFLLMFLCIALGFGWVFYRAANALPWFMACLFFLGIGGANFSVYTLWLPEQYRTE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH CRGSAFAFATSFGRFLAAGITFLVGAGVARMHTIGTPVALTCIAFLVGLALLPLAVETKG HCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC KELPA CCCCC >Mature Secondary Structure PERLTTNQIRGFWAAWAGWALDGMDSFLYALVLVPALRDLLPRSGIAATQANIGYYGGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHH LFAIFLLGWGFAFLWGPLADRFGRVRTLVLTIVCYSLFTFLGSAAANVWQLAAFRFLAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIGGEWTIGGVFVAEEWPESRRKNGAAWMHTGYYFGTFLAAIVNYTVGSHYGWRAVFAVG CCCCCEEECCEEEECCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEC GTPALLVAFIRYGVRESKRWEQGVAKRQDRWTARDAFFALFSAEYRNRTVVNAALLFISM CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VGLWAGSAYVPSSITYLAVHEGFTAADAARLASWAIMLLSAGTILGCLMLPALAERLGRR HHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GALAFYFLLMFLCIALGFGWVFYRAANALPWFMACLFFLGIGGANFSVYTLWLPEQYRTE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH CRGSAFAFATSFGRFLAAGITFLVGAGVARMHTIGTPVALTCIAFLVGLALLPLAVETKG HCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC KELPA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]