| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620102
Identifier: 116620102
GI number: 116620102
Start: 1212866
End: 1214305
Strand: Direct
Name: 116620102
Synonym: Acid_0975
Alternate gene names: NA
Gene position: 1212866-1214305 (Clockwise)
Preceding gene: 116620101
Following gene: 116620103
Centisome position: 12.17
GC content: 63.89
Gene sequence:
>1440_bases ATGAATCCCTTCCGCGAGCGTGATTTGATCCTCACCCGCCGGCAGTTGTTCGGCCGGGCTGTGAGCGGCATCGGCACCAC CGCGCTGGCGTCGCTGTGCGCGCCGGCGGCCTTCGCCGCGAAGGGGCTGCCCGGCTTCCCCAACTTCAAGCCGACGGCAA AGCGTGTGATCTACCTGCACCAATCGGGCGCGCCTTCGCAGATGGACCTGTTCGACCCGAAGCCGAAGCTCGCCGAGCGC TTCGCCGAAGAACTGCCAGACTCCATACGGCAGGGCCAGCGACTCACCGGCATGACGTCCGGGCAGAAGAAGTTTCCGGT GGCGCCCTCGAAGTACAAATTCGCGCGCTATGGCCCGGGCGGCACGTGGATGTGCGAGCTGTTGCCGCATACCGCCAAAG TCGCGGGCGACATCTGCGTGATCAAGAGCCTGTTCACGGAAGCCATCAATCACGATCCGGCGATCACGTTTATCCAGACG GGCAGCCAGGTGGCGGGGCGTCCGTGCTTCGGGTCGTGGATCTCTTACGGACTGGGCAGCGAGAGCCAGGACCTGCCCGC GTTCGTCGTGATGATTTCGCGCGGCACTGGCCGGCGGGTGGATCAGCCGCTCTACGACCGCTTGTGGGGCAGCGGCTTTT TGCCGACCGAATACCAGGGCGTGAAATTCCGGTCGGGCGGCGACCCGGTGCTGTATCTGTCGAATCCGCCGGGTATCGCG CCCGCGGTGCGGCGGTCCATGCTGGACGATATCGGGGGCCTCAATCGGGCAAATCTCGCGGAGTTCGGCGACCCTGAGAT CGCGGGGCGCATCCAGCAGTACGAGATGGCTTACCGCATGCAGACCTCGGTTCCGGAGCTGACGGATCTCTCGCGCGAGC CAGACTCCACCTTCGAACTCTACGGGCCGGATGCCCGCACGCCCGGGACTTACGCCGCGAATTGCATTTTGGCGCGCCGA CTCGCGGAGCGCGGCGTGCGTTTCATCCAGATCTACCACATGGGTTGGGACCACCACGAGGGTGTGCCTCGCCAGTTGCC ACCGCAGTGCCTGGACACGGACCAGCCGTCGGCGGCGCTGATTCAGGATTTGAAGCTGCGCGGGATGCTCGACGACACGC TGGTCATCTGGGGCGGGGAATTCGGGCGTACGGTCTATTGCCAGGGCAATCTTTCGCCTGAGAATTACGGTCGCGATCAC CATCCACGCTGCTTCAGCGTGTGGCTGGCGGGCGGCGGGATCAAGCCGGGGCTGAGCTACGGCGAGACCGACGACTACAG CTACAATATCGTCGAGAATCCGGTTCACGTCCACGACCTGAATGCCACGATGATGCATTGCCTTGGCATCGACCACACCA AACTCACATATCGTTACCAGGGGCGTGATTTCCGCCTCACGGATGTCCATGGGACCGTCGTGAAAGATCTGCTCGCCTGA
Upstream 100 bases:
>100_bases GAGAATCGCCGCGCGATATGCAGCTCGACGCGGTGGAACTGGCCGCTTACACGACCGCTGCCAGTGTGATTCTGAATCTC GACGAGGTGATCACGCGCCA
Downstream 100 bases:
>100_bases ATTTGGGCAACCGCCAGGCAAATTACCGATCGCTCCCTGACGGTCGCGGCTCTGATTGGCTGCCTTGCTATCCTAGAAAG TTGGAGCCACGCATTGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MNPFRERDLILTRRQLFGRAVSGIGTTALASLCAPAAFAAKGLPGFPNFKPTAKRVIYLHQSGAPSQMDLFDPKPKLAER FAEELPDSIRQGQRLTGMTSGQKKFPVAPSKYKFARYGPGGTWMCELLPHTAKVAGDICVIKSLFTEAINHDPAITFIQT GSQVAGRPCFGSWISYGLGSESQDLPAFVVMISRGTGRRVDQPLYDRLWGSGFLPTEYQGVKFRSGGDPVLYLSNPPGIA PAVRRSMLDDIGGLNRANLAEFGDPEIAGRIQQYEMAYRMQTSVPELTDLSREPDSTFELYGPDARTPGTYAANCILARR LAERGVRFIQIYHMGWDHHEGVPRQLPPQCLDTDQPSAALIQDLKLRGMLDDTLVIWGGEFGRTVYCQGNLSPENYGRDH HPRCFSVWLAGGGIKPGLSYGETDDYSYNIVENPVHVHDLNATMMHCLGIDHTKLTYRYQGRDFRLTDVHGTVVKDLLA
Sequences:
>Translated_479_residues MNPFRERDLILTRRQLFGRAVSGIGTTALASLCAPAAFAAKGLPGFPNFKPTAKRVIYLHQSGAPSQMDLFDPKPKLAER FAEELPDSIRQGQRLTGMTSGQKKFPVAPSKYKFARYGPGGTWMCELLPHTAKVAGDICVIKSLFTEAINHDPAITFIQT GSQVAGRPCFGSWISYGLGSESQDLPAFVVMISRGTGRRVDQPLYDRLWGSGFLPTEYQGVKFRSGGDPVLYLSNPPGIA PAVRRSMLDDIGGLNRANLAEFGDPEIAGRIQQYEMAYRMQTSVPELTDLSREPDSTFELYGPDARTPGTYAANCILARR LAERGVRFIQIYHMGWDHHEGVPRQLPPQCLDTDQPSAALIQDLKLRGMLDDTLVIWGGEFGRTVYCQGNLSPENYGRDH HPRCFSVWLAGGGIKPGLSYGETDDYSYNIVENPVHVHDLNATMMHCLGIDHTKLTYRYQGRDFRLTDVHGTVVKDLLA >Mature_479_residues MNPFRERDLILTRRQLFGRAVSGIGTTALASLCAPAAFAAKGLPGFPNFKPTAKRVIYLHQSGAPSQMDLFDPKPKLAER FAEELPDSIRQGQRLTGMTSGQKKFPVAPSKYKFARYGPGGTWMCELLPHTAKVAGDICVIKSLFTEAINHDPAITFIQT GSQVAGRPCFGSWISYGLGSESQDLPAFVVMISRGTGRRVDQPLYDRLWGSGFLPTEYQGVKFRSGGDPVLYLSNPPGIA PAVRRSMLDDIGGLNRANLAEFGDPEIAGRIQQYEMAYRMQTSVPELTDLSREPDSTFELYGPDARTPGTYAANCILARR LAERGVRFIQIYHMGWDHHEGVPRQLPPQCLDTDQPSAALIQDLKLRGMLDDTLVIWGGEFGRTVYCQGNLSPENYGRDH HPRCFSVWLAGGGIKPGLSYGETDDYSYNIVENPVHVHDLNATMMHCLGIDHTKLTYRYQGRDFRLTDVHGTVVKDLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53046; Mature: 53046
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFRERDLILTRRQLFGRAVSGIGTTALASLCAPAAFAAKGLPGFPNFKPTAKRVIYLH CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE QSGAPSQMDLFDPKPKLAERFAEELPDSIRQGQRLTGMTSGQKKFPVAPSKYKFARYGPG CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEECCCCCCCCCCCCCCCCCEEEECCC GTWMCELLPHTAKVAGDICVIKSLFTEAINHDPAITFIQTGSQVAGRPCFGSWISYGLGS CCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCC ESQDLPAFVVMISRGTGRRVDQPLYDRLWGSGFLPTEYQGVKFRSGGDPVLYLSNPPGIA CCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCC PAVRRSMLDDIGGLNRANLAEFGDPEIAGRIQQYEMAYRMQTSVPELTDLSREPDSTFEL HHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEE YGPDARTPGTYAANCILARRLAERGVRFIQIYHMGWDHHEGVPRQLPPQCLDTDQPSAAL ECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCHHHH IQDLKLRGMLDDTLVIWGGEFGRTVYCQGNLSPENYGRDHHPRCFSVWLAGGGIKPGLSY HHHHHHCCCCCCEEEEECCCCCCEEEEECCCCHHHCCCCCCCCEEEEEEECCCCCCCCCC GETDDYSYNIVENPVHVHDLNATMMHCLGIDHTKLTYRYQGRDFRLTDVHGTVVKDLLA CCCCCCEEEEECCCEEEEECCHHHHHHHCCCCCEEEEEECCCEEEEECCCHHHHHHHHC >Mature Secondary Structure MNPFRERDLILTRRQLFGRAVSGIGTTALASLCAPAAFAAKGLPGFPNFKPTAKRVIYLH CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE QSGAPSQMDLFDPKPKLAERFAEELPDSIRQGQRLTGMTSGQKKFPVAPSKYKFARYGPG CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEECCCCCCCCCCCCCCCCCEEEECCC GTWMCELLPHTAKVAGDICVIKSLFTEAINHDPAITFIQTGSQVAGRPCFGSWISYGLGS CCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCC ESQDLPAFVVMISRGTGRRVDQPLYDRLWGSGFLPTEYQGVKFRSGGDPVLYLSNPPGIA CCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCC PAVRRSMLDDIGGLNRANLAEFGDPEIAGRIQQYEMAYRMQTSVPELTDLSREPDSTFEL HHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEE YGPDARTPGTYAANCILARRLAERGVRFIQIYHMGWDHHEGVPRQLPPQCLDTDQPSAAL ECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCHHHH IQDLKLRGMLDDTLVIWGGEFGRTVYCQGNLSPENYGRDHHPRCFSVWLAGGGIKPGLSY HHHHHHCCCCCCEEEEECCCCCCEEEEECCCCHHHCCCCCCCCEEEEEEECCCCCCCCCC GETDDYSYNIVENPVHVHDLNATMMHCLGIDHTKLTYRYQGRDFRLTDVHGTVVKDLLA CCCCCCEEEEECCCEEEEECCHHHHHHHCCCCCEEEEEECCCEEEEECCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA