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The map label for this gene is cbiW [H]

Identifier: 116620094

GI number: 116620094

Start: 1204094

End: 1204456

Strand: Reverse

Name: cbiW [H]

Synonym: Acid_0966

Alternate gene names: 116620094

Gene position: 1204456-1204094 (Counterclockwise)

Preceding gene: 116620095

Following gene: 116620092

Centisome position: 12.09

GC content: 58.13

Gene sequence:

>363_bases
ATGCGGGATCACGAACGCCTCGTCCAACTCGCCGCCGGGCTGCAGATCCCGACGCTTCGACATCATATCTTTCTTTGCGC
CGAACAAAGTAAGCCGAAATGCTGCAGTCAGGAAGAAGGCGAGAAGTCGTGGAAGTATCTCAAGCACCGCCTGGCCGAGC
TCGGCATTCTCGATCGCGTATATCGCACCAAGGCCAACTGCCTGCGCGTCTGTGAACAGGGGCCCATCGCCGTGGTCTAT
CCCGAAGGCGTCTGGTATCACTCCGCGACACCCGAAGTTCTCGAGCGAATTATTCAGGAGCACCTGATCGGCGGGCGCTT
CGTGGAAGAGTATCGCTTCGCCAAATCGGATACCGGCTGCTAA

Upstream 100 bases:

>100_bases
CGTGCCGCAATCCTGCGCGCTCGCGCCCGGCGATATCGTGCGCATCGCGATCCCCGAGATCGGCGAACTTGCCAACCCGG
TCGAGTTCGTAGGCTAGCCC

Downstream 100 bases:

>100_bases
GAGCCAACCTACTCTTCTTCGGTTTGTTCCGGCGGTTCGAAGTTGTCCAATAACTCCGGATTCTTAGCGAACTTCTTAAG
CACGCGGATGATTTCGCCCG

Product: ferredoxin, 2Fe-2S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRDHERLVQLAAGLQIPTLRHHIFLCAEQSKPKCCSQEEGEKSWKYLKHRLAELGILDRVYRTKANCLRVCEQGPIAVVY
PEGVWYHSATPEVLERIIQEHLIGGRFVEEYRFAKSDTGC

Sequences:

>Translated_120_residues
MRDHERLVQLAAGLQIPTLRHHIFLCAEQSKPKCCSQEEGEKSWKYLKHRLAELGILDRVYRTKANCLRVCEQGPIAVVY
PEGVWYHSATPEVLERIIQEHLIGGRFVEEYRFAKSDTGC
>Mature_120_residues
MRDHERLVQLAAGLQIPTLRHHIFLCAEQSKPKCCSQEEGEKSWKYLKHRLAELGILDRVYRTKANCLRVCEQGPIAVVY
PEGVWYHSATPEVLERIIQEHLIGGRFVEEYRFAKSDTGC

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 13880; Mature: 13880

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDHERLVQLAAGLQIPTLRHHIFLCAEQSKPKCCSQEEGEKSWKYLKHRLAELGILDRV
CCHHHHHHHHHHCCCCCHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YRTKANCLRVCEQGPIAVVYPEGVWYHSATPEVLERIIQEHLIGGRFVEEYRFAKSDTGC
HHHHHHHHHHHCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRDHERLVQLAAGLQIPTLRHHIFLCAEQSKPKCCSQEEGEKSWKYLKHRLAELGILDRV
CCHHHHHHHHHHCCCCCHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YRTKANCLRVCEQGPIAVVYPEGVWYHSATPEVLERIIQEHLIGGRFVEEYRFAKSDTGC
HHHHHHHHHHHCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9742225 [H]