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The map label for this gene is 116620023

Identifier: 116620023

GI number: 116620023

Start: 1126163

End: 1127311

Strand: Direct

Name: 116620023

Synonym: Acid_0895

Alternate gene names: NA

Gene position: 1126163-1127311 (Clockwise)

Preceding gene: 116620022

Following gene: 116620026

Centisome position: 11.3

GC content: 64.75

Gene sequence:

>1149_bases
ATGCGCTACCGCCTCACATGCCTGACCCCGCTGCTGGTCGGTGATGGGCGCAAACTCAGCCCCATCGACTACATGGTCTG
GAAGGACCACGTGAATGTGCTCGACCAGTGGCGGATTTTCCGTTTGTTGGCGAAGGGGCCGCGGCTGGAAAGCTATCTCA
CGCAACTCAAGAATGCGGAGAAGCTGGATTTCGCAAGCTGGGGCGGATTCGCGCAGAATTTCGCCGGGCGGCGCGTGCCG
TTCGAAAATGCCGCGTACTCGGCGTATTGGAATCGCGCGGCCGGGGAGAGCCTGCACATTCCGACGTTCGCATCGGGGGC
CAGCGGACAGTATCTTCCAGGGACTGCGATCAAGGGCGCGCTGCGCACCGGCATGGTGTTCTCGCAGTGGCGCGACGGCA
TGCTGCAGGATGTGCTGGGCCGGGTGAAGGGCGACCGTCCGCCGCGGCGTCCGGCGGAAAGCGTGGAAGAGCAGGCGCTC
GGCGGCGGCGGGTCGAACCGCATGCGTTTCGTGAGTGCGGGCGATTCCGGGGTGGTGGCTACCGGCGAGTTCAAGATTTA
CCTGCTGCGGACGTCCACGCTGCAGCCTCGCGGGGGCAACTTCGCGCTCGGGTGGAAGCAGAGCCCGCGCGGCGCCGTGG
ATGGCGCGCGTCCCGACGAGAGCACTCCTACGTTCGCGGAGATGGCTTCGCCGGGCACGACGTTTCGCGGCGATTGGGAC
GAGAAGAGCTTCTTCCTGCAGACCGAGGTCCGCAAGAGCCTGCGCTGGCCGGAAGGCTTCAATCGCGCAAAGATCTTCGA
GGCTGCGAATGTGTATGCGGCCGGCTGCCTCGCGCTGCAGCGGCAGTACGCGTCGCAGGCGGGAATGGGGCTGCTCGACC
GCAATCTGGATGAGTTGGAGCAGCGCCTGGCTGCGGCGCGCGAAAAAGGCACCTGCCTGCTCTCGATGGGCTGGGGCGGG
GGATTGTTGGCGAAGAGCGCGTGGCTTGACACCAGCAATGCCGACTACCGCAATATTCTGCAGCAGTTCGCGATCTACAA
TCGCGCGCTGGCGACGAATCTCCCGTTCCCGAAGACGCGGCGGATTGTATTTTTGGACAATCGTCCCGCGACACTGCCGG
GCTGGGTCGAACTGGCGATCGAAGAGTAG

Upstream 100 bases:

>100_bases
CGCCGCGCGGTTCCGCGGCGGACGTGGCGCCCGATGGTTTTGCGCACCCGGTGTTCCGCGCCGGTTTCGCGCTCTCCATC
CGGCTGCCCGAGGTGCATTG

Downstream 100 bases:

>100_bases
ATAGGCGACTCAGGAAATGAGGTGCGGCGCCACGAGGCTAACGAAGTCGCGTGACGAGATCACCTTCGTCATCTTCCAGA
AGACCGGGAAGTGGCGAAGA

Product: CRISPR-associated RAMP Csm5 family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Csm5 Family Protein

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRYRLTCLTPLLVGDGRKLSPIDYMVWKDHVNVLDQWRIFRLLAKGPRLESYLTQLKNAEKLDFASWGGFAQNFAGRRVP
FENAAYSAYWNRAAGESLHIPTFASGASGQYLPGTAIKGALRTGMVFSQWRDGMLQDVLGRVKGDRPPRRPAESVEEQAL
GGGGSNRMRFVSAGDSGVVATGEFKIYLLRTSTLQPRGGNFALGWKQSPRGAVDGARPDESTPTFAEMASPGTTFRGDWD
EKSFFLQTEVRKSLRWPEGFNRAKIFEAANVYAAGCLALQRQYASQAGMGLLDRNLDELEQRLAAAREKGTCLLSMGWGG
GLLAKSAWLDTSNADYRNILQQFAIYNRALATNLPFPKTRRIVFLDNRPATLPGWVELAIEE

Sequences:

>Translated_382_residues
MRYRLTCLTPLLVGDGRKLSPIDYMVWKDHVNVLDQWRIFRLLAKGPRLESYLTQLKNAEKLDFASWGGFAQNFAGRRVP
FENAAYSAYWNRAAGESLHIPTFASGASGQYLPGTAIKGALRTGMVFSQWRDGMLQDVLGRVKGDRPPRRPAESVEEQAL
GGGGSNRMRFVSAGDSGVVATGEFKIYLLRTSTLQPRGGNFALGWKQSPRGAVDGARPDESTPTFAEMASPGTTFRGDWD
EKSFFLQTEVRKSLRWPEGFNRAKIFEAANVYAAGCLALQRQYASQAGMGLLDRNLDELEQRLAAAREKGTCLLSMGWGG
GLLAKSAWLDTSNADYRNILQQFAIYNRALATNLPFPKTRRIVFLDNRPATLPGWVELAIEE
>Mature_382_residues
MRYRLTCLTPLLVGDGRKLSPIDYMVWKDHVNVLDQWRIFRLLAKGPRLESYLTQLKNAEKLDFASWGGFAQNFAGRRVP
FENAAYSAYWNRAAGESLHIPTFASGASGQYLPGTAIKGALRTGMVFSQWRDGMLQDVLGRVKGDRPPRRPAESVEEQAL
GGGGSNRMRFVSAGDSGVVATGEFKIYLLRTSTLQPRGGNFALGWKQSPRGAVDGARPDESTPTFAEMASPGTTFRGDWD
EKSFFLQTEVRKSLRWPEGFNRAKIFEAANVYAAGCLALQRQYASQAGMGLLDRNLDELEQRLAAAREKGTCLLSMGWGG
GLLAKSAWLDTSNADYRNILQQFAIYNRALATNLPFPKTRRIVFLDNRPATLPGWVELAIEE

Specific function: Unknown

COG id: COG1332

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42402; Mature: 42402

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRLTCLTPLLVGDGRKLSPIDYMVWKDHVNVLDQWRIFRLLAKGPRLESYLTQLKNAE
CCEEEEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
KLDFASWGGFAQNFAGRRVPFENAAYSAYWNRAAGESLHIPTFASGASGQYLPGTAIKGA
CCCCHHCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHH
LRTGMVFSQWRDGMLQDVLGRVKGDRPPRRPAESVEEQALGGGGSNRMRFVSAGDSGVVA
HHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCEEE
TGEFKIYLLRTSTLQPRGGNFALGWKQSPRGAVDGARPDESTPTFAEMASPGTTFRGDWD
ECCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
EKSFFLQTEVRKSLRWPEGFNRAKIFEAANVYAAGCLALQRQYASQAGMGLLDRNLDELE
CCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHH
QRLAAAREKGTCLLSMGWGGGLLAKSAWLDTSNADYRNILQQFAIYNRALATNLPFPKTR
HHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
RIVFLDNRPATLPGWVELAIEE
EEEEECCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRYRLTCLTPLLVGDGRKLSPIDYMVWKDHVNVLDQWRIFRLLAKGPRLESYLTQLKNAE
CCEEEEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
KLDFASWGGFAQNFAGRRVPFENAAYSAYWNRAAGESLHIPTFASGASGQYLPGTAIKGA
CCCCHHCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHH
LRTGMVFSQWRDGMLQDVLGRVKGDRPPRRPAESVEEQALGGGGSNRMRFVSAGDSGVVA
HHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCEEE
TGEFKIYLLRTSTLQPRGGNFALGWKQSPRGAVDGARPDESTPTFAEMASPGTTFRGDWD
ECCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
EKSFFLQTEVRKSLRWPEGFNRAKIFEAANVYAAGCLALQRQYASQAGMGLLDRNLDELE
CCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHH
QRLAAAREKGTCLLSMGWGGGLLAKSAWLDTSNADYRNILQQFAIYNRALATNLPFPKTR
HHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
RIVFLDNRPATLPGWVELAIEE
EEEEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA