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The map label for this gene is 116619998

Identifier: 116619998

GI number: 116619998

Start: 1082319

End: 1082939

Strand: Direct

Name: 116619998

Synonym: Acid_0870

Alternate gene names: NA

Gene position: 1082319-1082939 (Clockwise)

Preceding gene: 116619997

Following gene: 116619999

Centisome position: 10.86

GC content: 61.03

Gene sequence:

>621_bases
ATGTTATTCGATTACCTAAGACAAGACACTCCAGCGCCCGGAGCCATGTTCCCGCTTTCCGGCAAGACGACTTCTGAGTC
GATTACCTCTCTTCTCTCTCAGGTGAACGGCGGCGATCGTGATGCCTTCGATCAGCTTGTTCCCCTGGTGTACCACGAGT
TACACCGAATCGCGGACGGCTATCTGCGGCGTGAATCGCAGAGTCACACTCTGCAGCCAACCGCCCTGGTTCACGAAGTC
TACTTGAGGCTCGCCGATTACGGCGGCAACGACTACGAGAGCCGGCGTCATTTCTACGCGATCGCCGCGCAAGTGATGCG
CCGTATCCTTGTTGACCACGCCCGCGCGCGCTGCGCCGCCAAGCGCGGCGCCGGAGTGAAGGTCCCCATGGAGCGCGAGC
ACGACATCGCCCGTGAACGTGACCGGATCGTAATCTGCTTGCATGATGCGCTGAACGCTCTGGCCATGGAAGACGACGTG
AAGGCGCGCCTGGTGGAGATGCGCTTCTTCGGCGGCATGACCGCGGAAGAGATCGCCGAATGCGTCTCCACTCCGGTCCA
CATTGTGCGCCGCGAATTGCGCAGCGCCCAGGTCTGGCTACGGCGGGAAATTGAGGCGTGA

Upstream 100 bases:

>100_bases
CAGTGAAGATGGGCACATTACAATCCGGGCGCGCTTCTGTATCATACGGTATCAGGAGACTTGGTGCCCAGCAGGTCACC
GGGTAATACCAACCCTTAAA

Downstream 100 bases:

>100_bases
ACCGGCAGGTCGAAATCCTGGTGGACCAGGCCGCGCAGCTGCCCCAGGAGAGCCGGGCGGCCTTTCTCGATCGCGCCTGC
CCCGACCCGCGGCTCAGAGC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma Factor; RNA Polymerase Sigma Factor; ECF Sigma Factor Family Protein; RNA Polymerase ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; Extracytoplasmic Sigma Factor ECF; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-E Factor; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLFDYLRQDTPAPGAMFPLSGKTTSESITSLLSQVNGGDRDAFDQLVPLVYHELHRIADGYLRRESQSHTLQPTALVHEV
YLRLADYGGNDYESRRHFYAIAAQVMRRILVDHARARCAAKRGAGVKVPMEREHDIARERDRIVICLHDALNALAMEDDV
KARLVEMRFFGGMTAEEIAECVSTPVHIVRRELRSAQVWLRREIEA

Sequences:

>Translated_206_residues
MLFDYLRQDTPAPGAMFPLSGKTTSESITSLLSQVNGGDRDAFDQLVPLVYHELHRIADGYLRRESQSHTLQPTALVHEV
YLRLADYGGNDYESRRHFYAIAAQVMRRILVDHARARCAAKRGAGVKVPMEREHDIARERDRIVICLHDALNALAMEDDV
KARLVEMRFFGGMTAEEIAECVSTPVHIVRRELRSAQVWLRREIEA
>Mature_206_residues
MLFDYLRQDTPAPGAMFPLSGKTTSESITSLLSQVNGGDRDAFDQLVPLVYHELHRIADGYLRRESQSHTLQPTALVHEV
YLRLADYGGNDYESRRHFYAIAAQVMRRILVDHARARCAAKRGAGVKVPMEREHDIARERDRIVICLHDALNALAMEDDV
KARLVEMRFFGGMTAEEIAECVSTPVHIVRRELRSAQVWLRREIEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23472; Mature: 23472

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFDYLRQDTPAPGAMFPLSGKTTSESITSLLSQVNGGDRDAFDQLVPLVYHELHRIADG
CCCHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
YLRRESQSHTLQPTALVHEVYLRLADYGGNDYESRRHFYAIAAQVMRRILVDHARARCAA
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGAGVKVPMEREHDIARERDRIVICLHDALNALAMEDDVKARLVEMRFFGGMTAEEIAE
HCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
CVSTPVHIVRRELRSAQVWLRREIEA
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFDYLRQDTPAPGAMFPLSGKTTSESITSLLSQVNGGDRDAFDQLVPLVYHELHRIADG
CCCHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
YLRRESQSHTLQPTALVHEVYLRLADYGGNDYESRRHFYAIAAQVMRRILVDHARARCAA
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGAGVKVPMEREHDIARERDRIVICLHDALNALAMEDDVKARLVEMRFFGGMTAEEIAE
HCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
CVSTPVHIVRRELRSAQVWLRREIEA
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA