| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619987
Identifier: 116619987
GI number: 116619987
Start: 1064920
End: 1066473
Strand: Direct
Name: 116619987
Synonym: Acid_0859
Alternate gene names: NA
Gene position: 1064920-1066473 (Clockwise)
Preceding gene: 116619986
Following gene: 116619988
Centisome position: 10.69
GC content: 60.36
Gene sequence:
>1554_bases ATGTCTCAACATAAGTCTGGAAATCCAGTTACTCGCCGCGAGGCGCTGCGACGCGTCGGCAACGGTTTCGGCATGGCGGC CTTCGCTGGAATGCTGGGCAGTTCGCTGGCAAAGGCCGGGTCCGTGATCCGGCCGGACGGCACCATCGGCGTGGCCAGCC TCGATTACCCGCAGCGCGTGAAGCGCGTGATCTTCCTCTTTATGAACGGCGGCTGCTCCCACGTGGATAGCTTCGACCCG AAGCCCATGTTGGATAAGTACGACGGCCAGCCGCTGCCGGGCGGCACCGTGAAGACAGAGCGCCGTACGGGCGAACTCAT GAAGTCGCCCTTCAAGTTCAAGAAGTACGGCCAGTGCGGGATGGATGTCAGCGAATTGTGGCCACATCTGGGCGAAGTGG CCGACGATATCTGCTGGGTGCGGTCCGTGTATACCGATATTCCCAACCACGAGCCCTCGTGCCTGATGATGAATACCGGC GCCAACCAGGCGGGCCGCCCCTCCATGGGAGCGTGGCTGACTTACGGGCTTGGGACCGAGAACCAAAACCTTCCGGGATA CGTCGTGTTATGTCCCGACGTGCCGACCACGGTCGGGCCGCCGTTGTGGAGCAATGGATTTCTGCCGGCGATCCACCAGG GAACATTCATCTCCAACCGCGTGCAGACCGCTGCCGATGCCGAAGGCATGGAAGGCGCCGACGCCATGCCGGAGATGCGG GCGGAAGCCACTGAAAAGGATAAGGACGGCAAAGAGAAACCAAAGAAGGTCGTGATCGAGAAGAACTTCGATCCGAAAAA ACTGGTCAGCTACGTCAACAACCCGAAGTTCTCCCTGACCGAGCAACAGCGGGAGATGGATCTGCTGAAGAAGCTGGAAG GTATGCGCGAAATGCAGACCGGGACCGACCAGCAGGTGGAGGCGACCATCAAGTCGATGGAGATCGCCTACCGCATGCAG ACCGAGGCTCCGGAGGTCTTCGACGTTCGCAAGGAATCGCAGGCGACCCTGGATCTGTACGGCCCGGGCCCGGTTGCTCG CGGGGCGCTCACGGCCGTACGCCTCGCCGAGAAGGGTGTGCGCATGACACAGGTCTATTACTCCAAAGGGGATCCCTGGG ACGCGCACGGCGATATCTTCGCGCACAAAACCAATGCCAAGAACTCCGATCAGGCATTCGCGGCCGTTATCAAAGATCTG AAGTCGCGCGGTTTGTGGAAAGACACGCTGGTGGTCTGCGGTTCGGAATTCGGCCGGACTCCTGTACGCGAGGTGGGCGG TGCCAGCGGTTCCGTAAAGCGCGGGCGCGACCACAATCCATTCGGGTTCACCATGTGGCTGGCCGGCGGCGCCGTCAAAG GCGGTACGATCTATGGCGCTACCGACGATTTTGGTTTCAAGGCGATTGAGAAGCCCGTGCACGTGCACGATATTCACGCG ACCATACTCTATCTCTTCGGTATCGAGCACACCAAGCTGAGCTATCGCTACAGCGGGCGCGATTTCCGTTTGACGGACGT TGCCGGCAATGTTCTCCATGACGTGATCGCGTAA
Upstream 100 bases:
>100_bases CCCATTACCGTCAAATACGAGCCCACCGCGTGGGGTCGCTACGTCAAGATCCTGTTTAGCTCGAGCGAGTTTCTGTTCAT TAACTGAAGGGGAATCGGCA
Downstream 100 bases:
>100_bases TCTGGACCATTCGACTTTTTGATTTGACTTAGACCACCGTGTGACTTAGACTCACACAATACTTTGTTTCTGGGTGATCG CTGAAATCCACTCCTAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MSQHKSGNPVTRREALRRVGNGFGMAAFAGMLGSSLAKAGSVIRPDGTIGVASLDYPQRVKRVIFLFMNGGCSHVDSFDP KPMLDKYDGQPLPGGTVKTERRTGELMKSPFKFKKYGQCGMDVSELWPHLGEVADDICWVRSVYTDIPNHEPSCLMMNTG ANQAGRPSMGAWLTYGLGTENQNLPGYVVLCPDVPTTVGPPLWSNGFLPAIHQGTFISNRVQTAADAEGMEGADAMPEMR AEATEKDKDGKEKPKKVVIEKNFDPKKLVSYVNNPKFSLTEQQREMDLLKKLEGMREMQTGTDQQVEATIKSMEIAYRMQ TEAPEVFDVRKESQATLDLYGPGPVARGALTAVRLAEKGVRMTQVYYSKGDPWDAHGDIFAHKTNAKNSDQAFAAVIKDL KSRGLWKDTLVVCGSEFGRTPVREVGGASGSVKRGRDHNPFGFTMWLAGGAVKGGTIYGATDDFGFKAIEKPVHVHDIHA TILYLFGIEHTKLSYRYSGRDFRLTDVAGNVLHDVIA
Sequences:
>Translated_517_residues MSQHKSGNPVTRREALRRVGNGFGMAAFAGMLGSSLAKAGSVIRPDGTIGVASLDYPQRVKRVIFLFMNGGCSHVDSFDP KPMLDKYDGQPLPGGTVKTERRTGELMKSPFKFKKYGQCGMDVSELWPHLGEVADDICWVRSVYTDIPNHEPSCLMMNTG ANQAGRPSMGAWLTYGLGTENQNLPGYVVLCPDVPTTVGPPLWSNGFLPAIHQGTFISNRVQTAADAEGMEGADAMPEMR AEATEKDKDGKEKPKKVVIEKNFDPKKLVSYVNNPKFSLTEQQREMDLLKKLEGMREMQTGTDQQVEATIKSMEIAYRMQ TEAPEVFDVRKESQATLDLYGPGPVARGALTAVRLAEKGVRMTQVYYSKGDPWDAHGDIFAHKTNAKNSDQAFAAVIKDL KSRGLWKDTLVVCGSEFGRTPVREVGGASGSVKRGRDHNPFGFTMWLAGGAVKGGTIYGATDDFGFKAIEKPVHVHDIHA TILYLFGIEHTKLSYRYSGRDFRLTDVAGNVLHDVIA >Mature_516_residues SQHKSGNPVTRREALRRVGNGFGMAAFAGMLGSSLAKAGSVIRPDGTIGVASLDYPQRVKRVIFLFMNGGCSHVDSFDPK PMLDKYDGQPLPGGTVKTERRTGELMKSPFKFKKYGQCGMDVSELWPHLGEVADDICWVRSVYTDIPNHEPSCLMMNTGA NQAGRPSMGAWLTYGLGTENQNLPGYVVLCPDVPTTVGPPLWSNGFLPAIHQGTFISNRVQTAADAEGMEGADAMPEMRA EATEKDKDGKEKPKKVVIEKNFDPKKLVSYVNNPKFSLTEQQREMDLLKKLEGMREMQTGTDQQVEATIKSMEIAYRMQT EAPEVFDVRKESQATLDLYGPGPVARGALTAVRLAEKGVRMTQVYYSKGDPWDAHGDIFAHKTNAKNSDQAFAAVIKDLK SRGLWKDTLVVCGSEFGRTPVREVGGASGSVKRGRDHNPFGFTMWLAGGAVKGGTIYGATDDFGFKAIEKPVHVHDIHAT ILYLFGIEHTKLSYRYSGRDFRLTDVAGNVLHDVIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56721; Mature: 56590
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHKSGNPVTRREALRRVGNGFGMAAFAGMLGSSLAKAGSVIRPDGTIGVASLDYPQRV CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEECCHHHHH KRVIFLFMNGGCSHVDSFDPKPMLDKYDGQPLPGGTVKTERRTGELMKSPFKFKKYGQCG HHHEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCC MDVSELWPHLGEVADDICWVRSVYTDIPNHEPSCLMMNTGANQAGRPSMGAWLTYGLGTE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCC NQNLPGYVVLCPDVPTTVGPPLWSNGFLPAIHQGTFISNRVQTAADAEGMEGADAMPEMR CCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHH AEATEKDKDGKEKPKKVVIEKNFDPKKLVSYVNNPKFSLTEQQREMDLLKKLEGMREMQT HHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC GTDQQVEATIKSMEIAYRMQTEAPEVFDVRKESQATLDLYGPGPVARGALTAVRLAEKGV CCCHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCC RMTQVYYSKGDPWDAHGDIFAHKTNAKNSDQAFAAVIKDLKSRGLWKDTLVVCGSEFGRT EEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHEECHHHCCC PVREVGGASGSVKRGRDHNPFGFTMWLAGGAVKGGTIYGATDDFGFKAIEKPVHVHDIHA HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCHHHHCCCCEEEHHHH TILYLFGIEHTKLSYRYSGRDFRLTDVAGNVLHDVIA HHHHHHCCCEEEEEEEECCCCEEEHHHHHHHHHHHHC >Mature Secondary Structure SQHKSGNPVTRREALRRVGNGFGMAAFAGMLGSSLAKAGSVIRPDGTIGVASLDYPQRV CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEECCHHHHH KRVIFLFMNGGCSHVDSFDPKPMLDKYDGQPLPGGTVKTERRTGELMKSPFKFKKYGQCG HHHEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCC MDVSELWPHLGEVADDICWVRSVYTDIPNHEPSCLMMNTGANQAGRPSMGAWLTYGLGTE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCC NQNLPGYVVLCPDVPTTVGPPLWSNGFLPAIHQGTFISNRVQTAADAEGMEGADAMPEMR CCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHH AEATEKDKDGKEKPKKVVIEKNFDPKKLVSYVNNPKFSLTEQQREMDLLKKLEGMREMQT HHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC GTDQQVEATIKSMEIAYRMQTEAPEVFDVRKESQATLDLYGPGPVARGALTAVRLAEKGV CCCHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCC RMTQVYYSKGDPWDAHGDIFAHKTNAKNSDQAFAAVIKDLKSRGLWKDTLVVCGSEFGRT EEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHEECHHHCCC PVREVGGASGSVKRGRDHNPFGFTMWLAGGAVKGGTIYGATDDFGFKAIEKPVHVHDIHA HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCHHHHCCCCEEEHHHH TILYLFGIEHTKLSYRYSGRDFRLTDVAGNVLHDVIA HHHHHHCCCEEEEEEEECCCCEEEHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA