| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619984
Identifier: 116619984
GI number: 116619984
Start: 1059425
End: 1060447
Strand: Reverse
Name: 116619984
Synonym: Acid_0856
Alternate gene names: NA
Gene position: 1060447-1059425 (Counterclockwise)
Preceding gene: 116619985
Following gene: 116619983
Centisome position: 10.64
GC content: 64.71
Gene sequence:
>1023_bases ATGAATATCCGCACAATCGCCGCCACCGCGCTGGGGGCCTGCATGCCGCTGCTCCTGGTCTTCGGCCAGGACCCTGCCAC CACTCCCGCTCCCGAAAAGAAAGAGCGTCCCAAACGTCCGCCGCGTCCCGGCGTGAGCACGCCCGGAGTCAAGCGCGAGA TGTCCACCATCACTCCCGCCGCCGTCTTCCCGGTGCCAGGCACTCCCGATTGGCAGGTGATGACCGAAGATGCAGTGTGG GTCGCGAATGGCCCGAAGAACACGATCCATCGCCTGGATCCGAAAACGAACCAGGTGGCCGCCGCTGTCGAGGTGGGCAA ACGCCCTTGCTCCGGGCTGGCCGCCGGTTTCGGCAGCGTGTGGGTGCCGGTCTGCGGCGATAAAGCGCTGGTACGCGTGG ATGCGAAGACGAACCAGGTGACCACGACGATTCCCATCGGCCCGGCCAACAGCGAAGGCGGCCTGATCGCAGGCCCTGAC GCGATCTGGATGCTCACGGATATGAAAGGCACGCTCTCGCGCATCGATCCGGCGACGAACAAAGTGACCGCGGAAATCGC CGTCGCTCCGGGATCGGTCGCGTGCGTTTATGGAGCCGGCTCGATCTGGGTGAGCAGTCCGGAGAAGAGCGTGCTCACCC GGGTGGACGCAAAGACGAATGCCGTGCTCGACACGATCGCGGTCGGCCCCGGCCCGCGATTCCTGACGTTTGGCGCTGGC TCCGTGTGGACGCTCAACCAGGGCGACGGCACCGTGTCGCGCGTGGACGCGAAATCCGGGAAGCTAGTGACCAACATCGA GGTCGGATTGCCTGGCACCGGCGGCGAACTGGCCTTCGGCGACGGATTCGTGTGGGCCACTGTGTTCCAGATTCCGCTTT CAAAGATCGACCCGTCAAACAATCAGGTGGTGAAGCAATGGACCGGCCCGGGCGGCGATTCCGTGCGCGTCGGCCACGGC TCCCTCTGGCTTTCCAACCTGCGCGAACAGAACCTCTGGCGCATCGACTTGAAACAGCTCTGA
Upstream 100 bases:
>100_bases TCGGCTTGAACTTCGTCTGGCTGGCCGATCGCGAGGCAGGCCAGCTATGGAAACTCGACCCGCGCCGCATCGCGGCCACA CTCGCTGAATAGGAAAGCCC
Downstream 100 bases:
>100_bases CCGCACCCTCCGGCGCCGGGCCGCGGATGTTATAAACTACCAGTTGAGTCAGCGCCATGTTTGCGCGTCACCTGGCAGCG TTTTGCCTACTTTTTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MNIRTIAATALGACMPLLLVFGQDPATTPAPEKKERPKRPPRPGVSTPGVKREMSTITPAAVFPVPGTPDWQVMTEDAVW VANGPKNTIHRLDPKTNQVAAAVEVGKRPCSGLAAGFGSVWVPVCGDKALVRVDAKTNQVTTTIPIGPANSEGGLIAGPD AIWMLTDMKGTLSRIDPATNKVTAEIAVAPGSVACVYGAGSIWVSSPEKSVLTRVDAKTNAVLDTIAVGPGPRFLTFGAG SVWTLNQGDGTVSRVDAKSGKLVTNIEVGLPGTGGELAFGDGFVWATVFQIPLSKIDPSNNQVVKQWTGPGGDSVRVGHG SLWLSNLREQNLWRIDLKQL
Sequences:
>Translated_340_residues MNIRTIAATALGACMPLLLVFGQDPATTPAPEKKERPKRPPRPGVSTPGVKREMSTITPAAVFPVPGTPDWQVMTEDAVW VANGPKNTIHRLDPKTNQVAAAVEVGKRPCSGLAAGFGSVWVPVCGDKALVRVDAKTNQVTTTIPIGPANSEGGLIAGPD AIWMLTDMKGTLSRIDPATNKVTAEIAVAPGSVACVYGAGSIWVSSPEKSVLTRVDAKTNAVLDTIAVGPGPRFLTFGAG SVWTLNQGDGTVSRVDAKSGKLVTNIEVGLPGTGGELAFGDGFVWATVFQIPLSKIDPSNNQVVKQWTGPGGDSVRVGHG SLWLSNLREQNLWRIDLKQL >Mature_340_residues MNIRTIAATALGACMPLLLVFGQDPATTPAPEKKERPKRPPRPGVSTPGVKREMSTITPAAVFPVPGTPDWQVMTEDAVW VANGPKNTIHRLDPKTNQVAAAVEVGKRPCSGLAAGFGSVWVPVCGDKALVRVDAKTNQVTTTIPIGPANSEGGLIAGPD AIWMLTDMKGTLSRIDPATNKVTAEIAVAPGSVACVYGAGSIWVSSPEKSVLTRVDAKTNAVLDTIAVGPGPRFLTFGAG SVWTLNQGDGTVSRVDAKSGKLVTNIEVGLPGTGGELAFGDGFVWATVFQIPLSKIDPSNNQVVKQWTGPGGDSVRVGHG SLWLSNLREQNLWRIDLKQL
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35654; Mature: 35654
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRTIAATALGACMPLLLVFGQDPATTPAPEKKERPKRPPRPGVSTPGVKREMSTITPA CCCEEHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCE AVFPVPGTPDWQVMTEDAVWVANGPKNTIHRLDPKTNQVAAAVEVGKRPCSGLAAGFGSV EEEECCCCCCCEEEECCEEEEECCCCCHHEECCCCCHHHHHHHHHCCCCCCHHHHCCCCE WVPVCGDKALVRVDAKTNQVTTTIPIGPANSEGGLIAGPDAIWMLTDMKGTLSRIDPATN EEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCEEEEEECCCCHHHHCCCCCC KVTAEIAVAPGSVACVYGAGSIWVSSPEKSVLTRVDAKTNAVLDTIAVGPGPRFLTFGAG CEEEEEEECCCCEEEEEECCEEEECCCCHHHHEECCCCCCCEEEEEEECCCCCEEEECCC SVWTLNQGDGTVSRVDAKSGKLVTNIEVGLPGTGGELAFGDGFVWATVFQIPLSKIDPSN CEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCEEECCCEEEEEEEECHHHHCCCCC NQVVKQWTGPGGDSVRVGHGSLWLSNLREQNLWRIDLKQL CEEEEEECCCCCCEEEECCCHHHHHHHHHCCEEEEEHCCC >Mature Secondary Structure MNIRTIAATALGACMPLLLVFGQDPATTPAPEKKERPKRPPRPGVSTPGVKREMSTITPA CCCEEHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCE AVFPVPGTPDWQVMTEDAVWVANGPKNTIHRLDPKTNQVAAAVEVGKRPCSGLAAGFGSV EEEECCCCCCCEEEECCEEEEECCCCCHHEECCCCCHHHHHHHHHCCCCCCHHHHCCCCE WVPVCGDKALVRVDAKTNQVTTTIPIGPANSEGGLIAGPDAIWMLTDMKGTLSRIDPATN EEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCEEEEEECCCCHHHHCCCCCC KVTAEIAVAPGSVACVYGAGSIWVSSPEKSVLTRVDAKTNAVLDTIAVGPGPRFLTFGAG CEEEEEEECCCCEEEEEECCEEEECCCCHHHHEECCCCCCCEEEEEEECCCCCEEEECCC SVWTLNQGDGTVSRVDAKSGKLVTNIEVGLPGTGGELAFGDGFVWATVFQIPLSKIDPSN CEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCEEECCCEEEEEEEECHHHHCCCCC NQVVKQWTGPGGDSVRVGHGSLWLSNLREQNLWRIDLKQL CEEEEEECCCCCCEEEECCCHHHHHHHHHCCEEEEEHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA