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The map label for this gene is oxdD [H]

Identifier: 116619967

GI number: 116619967

Start: 1038439

End: 1039590

Strand: Reverse

Name: oxdD [H]

Synonym: Acid_0839

Alternate gene names: 116619967

Gene position: 1039590-1038439 (Counterclockwise)

Preceding gene: 116619974

Following gene: 116619966

Centisome position: 10.43

GC content: 62.59

Gene sequence:

>1152_bases
ATGTCTGATGAAAAGCCCGGTATCAGCCGGCGTAGCCTGTTCGACACAATGGCCGCTGGTTCTTTGGTTTTTGCCGCTGC
GAAGGCCGCGGGCGCCGAGCCAGCGCCTGACGAACCCAAGATCGAACCAATCGCCAATTTCAAGTACAACATCGAAAGCC
GCGAAGGCTGGCAGGGTCCTGGCGGGTCCGCCAAAGAAGCTACCGTCGCCGAGTTTCCGATTTCGCAGAGCATCGCCGGC
GTCTCCATGCGGCTCAAACCTGGCGCCATCCGCGAGCTCCACTGGCACGCGCTCGCCGCGGAGTGGGCCTATATGCTGGA
AGGGCGCTGCCGCGCAACCGTCGTCATGCCCAACGGCCAAAGCGAGATTGCCGATTTCGGCCCTGGCGACACCTGGTATT
TTCCGCGCGGCCACGGCCACGCCCTCCAGGGAATGGGGCCCGGAGAGTGCCACTTCATCCTCGGCTTCGACAACGGACAC
TTCTCGGAGTACGGCACCTTCAGCATCACCGATTGGATCGCCACCGCTCCCAAGAACGTGGTTGCGCGCACACTGCGCAT
TCCCGAATCGGCCGTGTCGCAATTCCCGAAGAAGGAAGTCTACATCGGGCCCGGCAAGGTCCCCGCTGCCGCGATTGAGC
CCCTCCGCGACGGCGGTGGGCAGACTCCGCAGTTCTCGCACAAGTACCGCCTGGACATGCAGCCGCCGCACGTCTTCCCC
GGCGGGCGCGAGTTCATCGTCTCTTCCAAAGAGTTCCCCATCCAGACCACGCTGACCGCCGTGAAGATGGAACTGCAGCC
CGGCGCCTTCCGCGAACTTCACTGGCATCCGCATGCCGACGAGTGGCAGTTCTTCGTCCGCGGCAGGGCTCGCGTCGGCG
TCTTCGGATCCCACAGCCGTACCCGCATCGACGAATTCGGCCCCAACGATGTCGGCTTCATCCAGCAGGGTTACGGCCAC
TACATCGAGCAGATTGGCGACGAGCCCACCGAGGTCATCATCCTGTTCAACAGCCCCGTTTTTGAAGAGATTTCGCTCGC
CAACTGGCTCGGCGGGAACCCGGTGTCGCTGCTCGAAACCAACTTCGGCATTCCGAAGGACCTGATCGACCAGCTGCCCA
AACGCGAAACCGGCATCTTCAAAAAAGGCTGA

Upstream 100 bases:

>100_bases
GAATAGTTTGGATGCGCCATTAGCGAAATTGATATGATTTCGGAAGCACTCATTCGGGACTGTGTTTACATGCGTTTCAC
TCCACGCACGAGGGGAAGTT

Downstream 100 bases:

>100_bases
TTCACATAGAGGCTGACCCCATGCAGACCAGACGTGCGTTTTTACAAGCCGGCGCCGCGGCCGCCGTGCTCGGGTTCGAT
CTTGCGCCCGCCTACGCCCA

Product: oxalate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSDEKPGISRRSLFDTMAAGSLVFAAAKAAGAEPAPDEPKIEPIANFKYNIESREGWQGPGGSAKEATVAEFPISQSIAG
VSMRLKPGAIRELHWHALAAEWAYMLEGRCRATVVMPNGQSEIADFGPGDTWYFPRGHGHALQGMGPGECHFILGFDNGH
FSEYGTFSITDWIATAPKNVVARTLRIPESAVSQFPKKEVYIGPGKVPAAAIEPLRDGGGQTPQFSHKYRLDMQPPHVFP
GGREFIVSSKEFPIQTTLTAVKMELQPGAFRELHWHPHADEWQFFVRGRARVGVFGSHSRTRIDEFGPNDVGFIQQGYGH
YIEQIGDEPTEVIILFNSPVFEEISLANWLGGNPVSLLETNFGIPKDLIDQLPKRETGIFKKG

Sequences:

>Translated_383_residues
MSDEKPGISRRSLFDTMAAGSLVFAAAKAAGAEPAPDEPKIEPIANFKYNIESREGWQGPGGSAKEATVAEFPISQSIAG
VSMRLKPGAIRELHWHALAAEWAYMLEGRCRATVVMPNGQSEIADFGPGDTWYFPRGHGHALQGMGPGECHFILGFDNGH
FSEYGTFSITDWIATAPKNVVARTLRIPESAVSQFPKKEVYIGPGKVPAAAIEPLRDGGGQTPQFSHKYRLDMQPPHVFP
GGREFIVSSKEFPIQTTLTAVKMELQPGAFRELHWHPHADEWQFFVRGRARVGVFGSHSRTRIDEFGPNDVGFIQQGYGH
YIEQIGDEPTEVIILFNSPVFEEISLANWLGGNPVSLLETNFGIPKDLIDQLPKRETGIFKKG
>Mature_382_residues
SDEKPGISRRSLFDTMAAGSLVFAAAKAAGAEPAPDEPKIEPIANFKYNIESREGWQGPGGSAKEATVAEFPISQSIAGV
SMRLKPGAIRELHWHALAAEWAYMLEGRCRATVVMPNGQSEIADFGPGDTWYFPRGHGHALQGMGPGECHFILGFDNGHF
SEYGTFSITDWIATAPKNVVARTLRIPESAVSQFPKKEVYIGPGKVPAAAIEPLRDGGGQTPQFSHKYRLDMQPPHVFPG
GREFIVSSKEFPIQTTLTAVKMELQPGAFRELHWHPHADEWQFFVRGRARVGVFGSHSRTRIDEFGPNDVGFIQQGYGHY
IEQIGDEPTEVIILFNSPVFEEISLANWLGGNPVSLLETNFGIPKDLIDQLPKRETGIFKKG

Specific function: Converts oxalate to formate and CO(2) [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 42155; Mature: 42024

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEKPGISRRSLFDTMAAGSLVFAAAKAAGAEPAPDEPKIEPIANFKYNIESREGWQGP
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCEECCEEEECCCCCCCCCC
GGSAKEATVAEFPISQSIAGVSMRLKPGAIRELHWHALAAEWAYMLEGRCRATVVMPNGQ
CCCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
SEIADFGPGDTWYFPRGHGHALQGMGPGECHFILGFDNGHFSEYGTFSITDWIATAPKNV
HHHHCCCCCCCEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCEEEHHHHHHCCHHH
VARTLRIPESAVSQFPKKEVYIGPGKVPAAAIEPLRDGGGQTPQFSHKYRLDMQPPHVFP
HHHHHCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
GGREFIVSSKEFPIQTTLTAVKMELQPGAFRELHWHPHADEWQFFVRGRARVGVFGSHSR
CCCEEEEECCCCCEEEEEEEEEEECCCCCCCEECCCCCCCCEEEEEECCEEEEEECCCCC
TRIDEFGPNDVGFIQQGYGHYIEQIGDEPTEVIILFNSPVFEEISLANWLGGNPVSLLET
CCHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEEC
NFGIPKDLIDQLPKRETGIFKKG
CCCCCHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
SDEKPGISRRSLFDTMAAGSLVFAAAKAAGAEPAPDEPKIEPIANFKYNIESREGWQGP
CCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCEECCEEEECCCCCCCCCC
GGSAKEATVAEFPISQSIAGVSMRLKPGAIRELHWHALAAEWAYMLEGRCRATVVMPNGQ
CCCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
SEIADFGPGDTWYFPRGHGHALQGMGPGECHFILGFDNGHFSEYGTFSITDWIATAPKNV
HHHHCCCCCCCEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCEEEHHHHHHCCHHH
VARTLRIPESAVSQFPKKEVYIGPGKVPAAAIEPLRDGGGQTPQFSHKYRLDMQPPHVFP
HHHHHCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
GGREFIVSSKEFPIQTTLTAVKMELQPGAFRELHWHPHADEWQFFVRGRARVGVFGSHSR
CCCEEEEECCCCCEEEEEEEEEEECCCCCCCEECCCCCCCCEEEEEECCEEEEEECCCCC
TRIDEFGPNDVGFIQQGYGHYIEQIGDEPTEVIILFNSPVFEEISLANWLGGNPVSLLET
CCHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEEC
NFGIPKDLIDQLPKRETGIFKKG
CCCCCHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11546787 [H]