| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619736
Identifier: 116619736
GI number: 116619736
Start: 738787
End: 739575
Strand: Direct
Name: 116619736
Synonym: Acid_0601
Alternate gene names: NA
Gene position: 738787-739575 (Clockwise)
Preceding gene: 116619729
Following gene: 116619737
Centisome position: 7.41
GC content: 59.7
Gene sequence:
>789_bases ATGACGAGACCAACACTTACCCTGACCACTGATTTCGGACTCAGCGACCATTTCGTGGGCACCATGAAAGGCGTGATTCT CGGCATCTGCCCCGAGGCGCAGATCGTCGATATCAGCCACGATGTCACACCGTTCGAGATCGCCGAGGGCGCGTACCTGA TCGCACAGGCATGGCGTTATTTCCCGAAGAAGACGGTTCACGTGGTGGTGGTGGATCCCGGAGTCGGCACCGCGCGCCGA CCGATTCTGGTTGAGGCCGGCGGGCAATATTTCATCGGCCCCGACAATGGCGTGCTCTCCATGGTGTACCTGCCGGAGAA GAGCAAAGTGCGGCTGCTCTCCAACGAGAAGTACTTCCATCATCCGGTGAGCAAGACGTTCCACGGACGCGACATCTTCG CGCCAGTGGCTGCTCACCTTGCAGCGGGGATTCCCCCGGCACGCTTCGGCAAGCCGGTGGAAGACTATCTCAAGCCGGAG TTCGAGAAACCGCACCGCGCGGGCAAGCGCACCTGGATCGCGCGCATTCTCAAGATCGATCGGTTCGGCAACATCATCAC CAACATCCACAGCAACGATTTCGGAGATCTCGCGCTGCGTAACTTCTCGCTCTCGCTCGGTCCGCAGACCGTGACCGTGC TGGCGCAAAACTACGCCCAATGCGCGCCCGGAGAGCTGTTCCTGATTCTCGGCAGCTCGGGATATTACGAGGTTTCCATC AGCCAGGGGAGTGCCGCAAAGTACGTGAAATGCGAACCTGGGGCCGCCATCGAATTGATGGTCTGGTAG
Upstream 100 bases:
>100_bases TGACCGAGACACGCCACCAGCGTCTCCATGACTTCCGGCGCAACCGGAGTTGTGGCATTGTGGTCGAAATAGAAGTGCTG CACTTGATTCCATTTTACCA
Downstream 100 bases:
>100_bases TTTTCGATTGACAAATCTAAACTAAACCGTTTAGTATTATTTTAGGGAGGGGGGGATCCATGATCCACGTCCAGAACCTG GTAAAGACCTTTGGCTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTRPTLTLTTDFGLSDHFVGTMKGVILGICPEAQIVDISHDVTPFEIAEGAYLIAQAWRYFPKKTVHVVVVDPGVGTARR PILVEAGGQYFIGPDNGVLSMVYLPEKSKVRLLSNEKYFHHPVSKTFHGRDIFAPVAAHLAAGIPPARFGKPVEDYLKPE FEKPHRAGKRTWIARILKIDRFGNIITNIHSNDFGDLALRNFSLSLGPQTVTVLAQNYAQCAPGELFLILGSSGYYEVSI SQGSAAKYVKCEPGAAIELMVW
Sequences:
>Translated_262_residues MTRPTLTLTTDFGLSDHFVGTMKGVILGICPEAQIVDISHDVTPFEIAEGAYLIAQAWRYFPKKTVHVVVVDPGVGTARR PILVEAGGQYFIGPDNGVLSMVYLPEKSKVRLLSNEKYFHHPVSKTFHGRDIFAPVAAHLAAGIPPARFGKPVEDYLKPE FEKPHRAGKRTWIARILKIDRFGNIITNIHSNDFGDLALRNFSLSLGPQTVTVLAQNYAQCAPGELFLILGSSGYYEVSI SQGSAAKYVKCEPGAAIELMVW >Mature_261_residues TRPTLTLTTDFGLSDHFVGTMKGVILGICPEAQIVDISHDVTPFEIAEGAYLIAQAWRYFPKKTVHVVVVDPGVGTARRP ILVEAGGQYFIGPDNGVLSMVYLPEKSKVRLLSNEKYFHHPVSKTFHGRDIFAPVAAHLAAGIPPARFGKPVEDYLKPEF EKPHRAGKRTWIARILKIDRFGNIITNIHSNDFGDLALRNFSLSLGPQTVTVLAQNYAQCAPGELFLILGSSGYYEVSIS QGSAAKYVKCEPGAAIELMVW
Specific function: Unknown
COG id: COG1912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002747 - InterPro: IPR023227 - InterPro: IPR023228 [H]
Pfam domain/function: PF01887 DUF62 [H]
EC number: NA
Molecular weight: Translated: 28797; Mature: 28665
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPTLTLTTDFGLSDHFVGTMKGVILGICPEAQIVDISHDVTPFEIAEGAYLIAQAWRY CCCCEEEEEECCCCCCHHHHHHCCEEEEECCCCEEEECCCCCCCEEECCCCHHHHHHHHH FPKKTVHVVVVDPGVGTARRPILVEAGGQYFIGPDNGVLSMVYLPEKSKVRLLSNEKYFH CCCCEEEEEEECCCCCCCCCCEEEECCCEEEECCCCCEEEEEEECCCCCEEEEECCCEEE HPVSKTFHGRDIFAPVAAHLAAGIPPARFGKPVEDYLKPEFEKPHRAGKRTWIARILKID CCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH RFGNIITNIHSNDFGDLALRNFSLSLGPQTVTVLAQNYAQCAPGELFLILGSSGYYEVSI HHCHHEEECCCCCCCCEEEEEEEEECCCCEEEEEHHHHHHCCCCEEEEEEECCCEEEEEE SQGSAAKYVKCEPGAAIELMVW CCCCCCEEEEECCCCEEEEEEC >Mature Secondary Structure TRPTLTLTTDFGLSDHFVGTMKGVILGICPEAQIVDISHDVTPFEIAEGAYLIAQAWRY CCCEEEEEECCCCCCHHHHHHCCEEEEECCCCEEEECCCCCCCEEECCCCHHHHHHHHH FPKKTVHVVVVDPGVGTARRPILVEAGGQYFIGPDNGVLSMVYLPEKSKVRLLSNEKYFH CCCCEEEEEEECCCCCCCCCCEEEECCCEEEECCCCCEEEEEEECCCCCEEEEECCCEEE HPVSKTFHGRDIFAPVAAHLAAGIPPARFGKPVEDYLKPEFEKPHRAGKRTWIARILKID CCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH RFGNIITNIHSNDFGDLALRNFSLSLGPQTVTVLAQNYAQCAPGELFLILGSSGYYEVSI HHCHHEEECCCCCCCCEEEEEEEEECCCCEEEEEHHHHHHCCCCEEEEEEECCCEEEEEE SQGSAAKYVKCEPGAAIELMVW CCCCCCEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]