| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619718
Identifier: 116619718
GI number: 116619718
Start: 713170
End: 714129
Strand: Direct
Name: 116619718
Synonym: Acid_0583
Alternate gene names: NA
Gene position: 713170-714129 (Clockwise)
Preceding gene: 116619707
Following gene: 116619719
Centisome position: 7.16
GC content: 66.46
Gene sequence:
>960_bases ATGAAAGGACTTACAGATATTCCCGGAATTCGTGTGGGGCACGTTTCCGATTTCGACGCGATTACCGGTTGCACCGCCAT TCTCTGCGAACAGGGTGCCATGGGCGGCGTCGATATCCGCGGCGGCGCCAGCGGCACTCAGGAAATCGACACCCTCAGCC CCGGACACGTCACCGACCAGGTGCATGGCATCCTGCTCGCCGGCGGCAGCGCCTTCGGCCTGGAAGCCGCCGCCGGCGTG CGCCGCTATCTCGCCAATCGCAAGGTGGGCTACGCCTTTGGCGGCCAGCACGTACCCATCGTTCCCGGCGCCATCCTGTT CGATCTCGGGATCGGGAAATCCAACGTGCACCCCAATGTCGCGATGGGTGAGGCGGCCGCCGCCGCGTCCACCACGGATG CGGTCCGCGAAGGCAGCGTCGGAGCCGGCACGGGTGCCACGGTCGGCAAGCTCTTCGGTCTTTCTCGCGCGATGAAGGGC GGCATTGGTTCGTACACGGTCACGCTTCCCGGCGGAGTGCTGGTCTCCGCGCTGGTCGCCGTCAACGCGCTCGGCGATAT CCGCGAACCCGCCACCGGCAAGATCGTCGCGGGCCTGCGCAAGAGCGCCGATAGCCGCGAACTCGCCGATACTGAAGGGG AGATGACTCACGGCGCTGTGATCGGCGCGGCGCCGCGCAACACCACGCTCGGCGTCGTAGCCACTAACGTAAAACTCACC AAGGTCCAGGCCACCAAATTGGCCCAGTTCGCCTCGCTCGGCATGGCGCGCGCCATCTACCCCGTCAACACCATGGCCGA TGGCGATATCGTTTTCGCACTATCTCTCGGAAGTCAAGAGGCGGACCTCAACACGCTCGGCACTGCCGCCGCCGCCGCAC TCGCCCAGGCCATCCTCCGCGCCGTCCGCCTAGCCACGACGCTCGGCGGCGTGCCGGGGTTGGGATCGTCGATCGGGTGA
Upstream 100 bases:
>100_bases GAAAAATTCCTGAACAGCTAGAACTGGCTCTTTCAGTAGATCCAGCAAGTAGGTTTTGTCCCCGCTATCCGATGCTACCA TACAAGTTGAAACACCACCC
Downstream 100 bases:
>100_bases GCGGTCCAGCGTTCTAGGCGAGGCGACTAAGCCTTAAGGGGAATTGTATTTAACGTACGATACGGTACGCTAATTTGCTG CCCATGGAGGCGCGCCGATG
Product: peptidase S58, DmpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKGLTDIPGIRVGHVSDFDAITGCTAILCEQGAMGGVDIRGGASGTQEIDTLSPGHVTDQVHGILLAGGSAFGLEAAAGV RRYLANRKVGYAFGGQHVPIVPGAILFDLGIGKSNVHPNVAMGEAAAAASTTDAVREGSVGAGTGATVGKLFGLSRAMKG GIGSYTVTLPGGVLVSALVAVNALGDIREPATGKIVAGLRKSADSRELADTEGEMTHGAVIGAAPRNTTLGVVATNVKLT KVQATKLAQFASLGMARAIYPVNTMADGDIVFALSLGSQEADLNTLGTAAAAALAQAILRAVRLATTLGGVPGLGSSIG
Sequences:
>Translated_319_residues MKGLTDIPGIRVGHVSDFDAITGCTAILCEQGAMGGVDIRGGASGTQEIDTLSPGHVTDQVHGILLAGGSAFGLEAAAGV RRYLANRKVGYAFGGQHVPIVPGAILFDLGIGKSNVHPNVAMGEAAAAASTTDAVREGSVGAGTGATVGKLFGLSRAMKG GIGSYTVTLPGGVLVSALVAVNALGDIREPATGKIVAGLRKSADSRELADTEGEMTHGAVIGAAPRNTTLGVVATNVKLT KVQATKLAQFASLGMARAIYPVNTMADGDIVFALSLGSQEADLNTLGTAAAAALAQAILRAVRLATTLGGVPGLGSSIG >Mature_319_residues MKGLTDIPGIRVGHVSDFDAITGCTAILCEQGAMGGVDIRGGASGTQEIDTLSPGHVTDQVHGILLAGGSAFGLEAAAGV RRYLANRKVGYAFGGQHVPIVPGAILFDLGIGKSNVHPNVAMGEAAAAASTTDAVREGSVGAGTGATVGKLFGLSRAMKG GIGSYTVTLPGGVLVSALVAVNALGDIREPATGKIVAGLRKSADSRELADTEGEMTHGAVIGAAPRNTTLGVVATNVKLT KVQATKLAQFASLGMARAIYPVNTMADGDIVFALSLGSQEADLNTLGTAAAAALAQAILRAVRLATTLGGVPGLGSSIG
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1333 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 31650; Mature: 31650
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLTDIPGIRVGHVSDFDAITGCTAILCEQGAMGGVDIRGGASGTQEIDTLSPGHVTDQ CCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHCCCCCCCCHHH VHGILLAGGSAFGLEAAAGVRRYLANRKVGYAFGGQHVPIVPGAILFDLGIGKSNVHPNV HCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCC AMGEAAAAASTTDAVREGSVGAGTGATVGKLFGLSRAMKGGIGSYTVTLPGGVLVSALVA CCCCHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH VNALGDIREPATGKIVAGLRKSADSRELADTEGEMTHGAVIGAAPRNTTLGVVATNVKLT HHHHHCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEE KVQATKLAQFASLGMARAIYPVNTMADGDIVFALSLGSQEADLNTLGTAAAAALAQAILR EHHHHHHHHHHHHCHHHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH AVRLATTLGGVPGLGSSIG HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKGLTDIPGIRVGHVSDFDAITGCTAILCEQGAMGGVDIRGGASGTQEIDTLSPGHVTDQ CCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHCCCCCCCCHHH VHGILLAGGSAFGLEAAAGVRRYLANRKVGYAFGGQHVPIVPGAILFDLGIGKSNVHPNV HCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCC AMGEAAAAASTTDAVREGSVGAGTGATVGKLFGLSRAMKGGIGSYTVTLPGGVLVSALVA CCCCHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH VNALGDIREPATGKIVAGLRKSADSRELADTEGEMTHGAVIGAAPRNTTLGVVATNVKLT HHHHHCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEE KVQATKLAQFASLGMARAIYPVNTMADGDIVFALSLGSQEADLNTLGTAAAAALAQAILR EHHHHHHHHHHHHCHHHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH AVRLATTLGGVPGLGSSIG HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]