| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619689
Identifier: 116619689
GI number: 116619689
Start: 667696
End: 670527
Strand: Direct
Name: 116619689
Synonym: Acid_0554
Alternate gene names: NA
Gene position: 667696-670527 (Clockwise)
Preceding gene: 116619688
Following gene: 116619690
Centisome position: 6.7
GC content: 63.1
Gene sequence:
>2832_bases ATGATCCGGACGTGTTTGACCTCCATCCTGTTCTTGGCGGGTTTCGCCGCGCTGTCCCCCGGCGCCGAGATCCCACTGCT CTTCATGGGCAATCGTGGACAGGCGCCCGCGAAGGTACAGTTCATGGTGAAGGGCGCGGGACTCGACGCGTATTTCCTGC CGGGCGAAGTGCACCTGGAAGTTCCCGGCAGGAGCCTGCGCATCCGGTTGGAAGGCGCGAGCCCCGGTCATGCTCTGAAG GGCAAGGGACGACTCTCGGGTCGGGCGAATTTCCTGACGGGCAGCCCTTCAGGGTGGGCCGTGGATATCCCGCTTTACGA ATCGTTGGTGTACCGGCAGGTCTACCCTGGCATCGATCTGGTGTACGGAGGCGAGGGGCGCAAGCTGAAGTCCGAAGTCG TGGTGGCTCCGGGCGCCGATCCTGGGCTGGTCAGGATGAGGTACCTGGGCGGCGGCGCTCCGTGGGTCGATAGCGATGGT TCGCTGGTGGTCCGCGTCGGCGACCGGGAACTGCGGGAAGAGCCTCCTGTGGTTTACCAGGAGCGCGACGGCGCAAGGGA ACCCGTGGTGGGACGCTTCGTTTTGCTCGGCAACAATGTCGTGGGGTTCGGGCTGGGCAAGTACGATCGAACGCGGACGC TGGTGATCGACCCGGTGCTTTCTTACAGCACCCTGCTGGGAGGTTCCGGCACCGATACCGCGAGTGCGGTGGCGGTAGAC GCGAGCGGAGCTGCCTACATTGCCGGGTATACCGACTCCACCAACCTGCCCGCGGTCAACTCCGCGCAGAGCTTCAACGC CGGCGGCAACGAGGTGATGGTGGCGAAGTTCAGTCCGGGCGGGAATTCGTTGGTGTATTGCACCTATCTGGGCGGGTCGG CCGACGATCGGGCGTACGGAATCGCGGTGGATGGGCAAGGGAATGCGTACATCGCAGGTTCGACGACATCGCGAAATTTT CCGGTGCGCGGCGCGCTGCAAGCCACATTGACAGGCTACCGGAATGCCTTCGTGGCAAAACTGAACCCGGCGGGCAACGG GCTGGTATACAGCACCTACCTCGGGGGCAATGCGTCCGATTCCGCCAATGGAATCGCGGTGGATTCCTCGGGCGCGGCGT ACGTGACCGGCGATACGACATCCTACAGTTTTCCCGCCAGCGGTTACCAGCGCGGTATACACGGCGGTCAAGATGCGTTC GTGGCCAAATTGAGCGCGGATGGGTCGCACCTTGTCTACAGCACCTATTTGGGCGGGAGCGGCGACGATCGCGGAACGGC GATCGCTCTTGATGGTTCCGGCTCGGCTTATATCACGGGGTCCACGTTCTCCATCGACTTCCCGGTGTTGTTTGCGGCCC AGCAACATGGCGGAGGAGGCCAGGATGCTTTCGTGACGCGGCTCAGCGCGGATGGGAGCTTTCTGTGGTTCAGCACGTAC CTCGGGGGCAGTGGCGGAACCGTGGTCTCGCCGGAAATTGGCGAGGCAATCGCGGTCGATGTCCAGGGAAACGCGTACGT GGCGGGAGTGACGAGCTCCGCCGACTTTCCGCGGCTGAACGCGCTCCAGACGTCTCTCCGCGGACTCTCGGACGCTTTCG TCAGCAAGCTGACGGCGGCCGGCGCCTTGAGCTACAGCACCTACCTGGGTGGTTCGGGGGCTGAAACGGCGACGGGCGTC GCGGTGGATTCCAGCGGCAACGCCTACGTTTCGGGCTACACATACTCCACCGATCTGCCGGTCGTCTCTCCAGTTCAGGC GATGAACGCGGGGGAATACGATGCTTTCGTGGCCGAGTTGAACTCCGCGGGAAATGCGCTCAGCTATCTGAGTTACCTGG GAGGCAACGGGTCGGACGCCGCCAGTTCCATCGCGCTCGATTCGTCGGGTACCGTGTACGTCGCGGGGTGGACGCTCTCC ACGAATTTTCCCCTGCTGAATTCCTATCAGCTGGTGAATTCGGGGAATTATGGGATGTTCGTCACCAAGATGATTTTCAG CACCACGCCGGTGAATGTCGGTGTCACGCCGGCGTCCGGCAATGGCGCGGGACAGGTGTTCAGCTTTCAGTTCGCGGACC CCGCAGGCGCCACCGATCTGACCAGCGTCGGCGCGCTATTCGGCGTGTCGGCCGGTACGAGCGGGGCTTGCGCGGTTTCG TACGACCGCGTTCACAATGCCCTTTTCCTGCTGACCGATTCGGGGCAGGCGCCGGCGGGTTCGATCACTCCCGGCAGCGG CACGCAGCAGAACTCGCAGTGCACGCTCAGTGGCGCGGGCTCCACGGTCGCCCTGTCTGGTCCGACACTCACGCTGAATC TCGCTCTCACATTCCTGCCGGCTTTCAACGGGTCGAAGACTGTCTACATGCAGGCCATCACCCCGCTTGCGTCCACAGCC TGGCAGCCTAAAGGCGCATGGTCTGTCACGTTCGCCGTGACCAACGTCTCGGTCACTCCGTCAGCGGGGAGCGGCGCCAC GCAACTGTTCTCGTTCCAGTTCTCCGACGAGGCGGGCTCCAATGACCTCACTTCGGTTTCGGTGCTTTTCAACTCGTCCG CATCAACTGTAACGGCCTGCTCGGTCACCTACGATCGCGCGCGCAATGCGCTCTCGTTGCTCACCGATGCAGGACAACTG CCGTCGGCGTCGATCACTCCCGGAAGCGGCACGCAGCAAAACCAGCAGTGCACGCTCAGCGGCACGGGTTCCAGCGTCGT CCTTTCAGGCAGGATGCTGACGCTTAATCTGGCGCTGACCTTTCTGCCCGCGTTCAGCGGCACGAAGAATATCTACATGC AGGCGATCAGCCCCTTTGGATCCGCGCCATAG
Upstream 100 bases:
>100_bases TGGTGGGTGCGCTGCGGCGCGATTTGGGCCGGGCCACGGTATCCGTTTAGCTCTCCCCTAAAGTCCGGCGTCACTTCTGC CGAATTAGAAGGTGACGCTT
Downstream 100 bases:
>100_bases GGGCATCACGTTTAATCGGGCTATAATGGCTTTTCCTCGGGTGGTTTCCTTCTTTCGATGTACCACTTTGCCCCATCCGG GCGCGGCTTCATAATGTGGA
Product: beta-propeller repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 943; Mature: 943
Protein sequence:
>943_residues MIRTCLTSILFLAGFAALSPGAEIPLLFMGNRGQAPAKVQFMVKGAGLDAYFLPGEVHLEVPGRSLRIRLEGASPGHALK GKGRLSGRANFLTGSPSGWAVDIPLYESLVYRQVYPGIDLVYGGEGRKLKSEVVVAPGADPGLVRMRYLGGGAPWVDSDG SLVVRVGDRELREEPPVVYQERDGAREPVVGRFVLLGNNVVGFGLGKYDRTRTLVIDPVLSYSTLLGGSGTDTASAVAVD ASGAAYIAGYTDSTNLPAVNSAQSFNAGGNEVMVAKFSPGGNSLVYCTYLGGSADDRAYGIAVDGQGNAYIAGSTTSRNF PVRGALQATLTGYRNAFVAKLNPAGNGLVYSTYLGGNASDSANGIAVDSSGAAYVTGDTTSYSFPASGYQRGIHGGQDAF VAKLSADGSHLVYSTYLGGSGDDRGTAIALDGSGSAYITGSTFSIDFPVLFAAQQHGGGGQDAFVTRLSADGSFLWFSTY LGGSGGTVVSPEIGEAIAVDVQGNAYVAGVTSSADFPRLNALQTSLRGLSDAFVSKLTAAGALSYSTYLGGSGAETATGV AVDSSGNAYVSGYTYSTDLPVVSPVQAMNAGEYDAFVAELNSAGNALSYLSYLGGNGSDAASSIALDSSGTVYVAGWTLS TNFPLLNSYQLVNSGNYGMFVTKMIFSTTPVNVGVTPASGNGAGQVFSFQFADPAGATDLTSVGALFGVSAGTSGACAVS YDRVHNALFLLTDSGQAPAGSITPGSGTQQNSQCTLSGAGSTVALSGPTLTLNLALTFLPAFNGSKTVYMQAITPLASTA WQPKGAWSVTFAVTNVSVTPSAGSGATQLFSFQFSDEAGSNDLTSVSVLFNSSASTVTACSVTYDRARNALSLLTDAGQL PSASITPGSGTQQNQQCTLSGTGSSVVLSGRMLTLNLALTFLPAFSGTKNIYMQAISPFGSAP
Sequences:
>Translated_943_residues MIRTCLTSILFLAGFAALSPGAEIPLLFMGNRGQAPAKVQFMVKGAGLDAYFLPGEVHLEVPGRSLRIRLEGASPGHALK GKGRLSGRANFLTGSPSGWAVDIPLYESLVYRQVYPGIDLVYGGEGRKLKSEVVVAPGADPGLVRMRYLGGGAPWVDSDG SLVVRVGDRELREEPPVVYQERDGAREPVVGRFVLLGNNVVGFGLGKYDRTRTLVIDPVLSYSTLLGGSGTDTASAVAVD ASGAAYIAGYTDSTNLPAVNSAQSFNAGGNEVMVAKFSPGGNSLVYCTYLGGSADDRAYGIAVDGQGNAYIAGSTTSRNF PVRGALQATLTGYRNAFVAKLNPAGNGLVYSTYLGGNASDSANGIAVDSSGAAYVTGDTTSYSFPASGYQRGIHGGQDAF VAKLSADGSHLVYSTYLGGSGDDRGTAIALDGSGSAYITGSTFSIDFPVLFAAQQHGGGGQDAFVTRLSADGSFLWFSTY LGGSGGTVVSPEIGEAIAVDVQGNAYVAGVTSSADFPRLNALQTSLRGLSDAFVSKLTAAGALSYSTYLGGSGAETATGV AVDSSGNAYVSGYTYSTDLPVVSPVQAMNAGEYDAFVAELNSAGNALSYLSYLGGNGSDAASSIALDSSGTVYVAGWTLS TNFPLLNSYQLVNSGNYGMFVTKMIFSTTPVNVGVTPASGNGAGQVFSFQFADPAGATDLTSVGALFGVSAGTSGACAVS YDRVHNALFLLTDSGQAPAGSITPGSGTQQNSQCTLSGAGSTVALSGPTLTLNLALTFLPAFNGSKTVYMQAITPLASTA WQPKGAWSVTFAVTNVSVTPSAGSGATQLFSFQFSDEAGSNDLTSVSVLFNSSASTVTACSVTYDRARNALSLLTDAGQL PSASITPGSGTQQNQQCTLSGTGSSVVLSGRMLTLNLALTFLPAFSGTKNIYMQAISPFGSAP >Mature_943_residues MIRTCLTSILFLAGFAALSPGAEIPLLFMGNRGQAPAKVQFMVKGAGLDAYFLPGEVHLEVPGRSLRIRLEGASPGHALK GKGRLSGRANFLTGSPSGWAVDIPLYESLVYRQVYPGIDLVYGGEGRKLKSEVVVAPGADPGLVRMRYLGGGAPWVDSDG SLVVRVGDRELREEPPVVYQERDGAREPVVGRFVLLGNNVVGFGLGKYDRTRTLVIDPVLSYSTLLGGSGTDTASAVAVD ASGAAYIAGYTDSTNLPAVNSAQSFNAGGNEVMVAKFSPGGNSLVYCTYLGGSADDRAYGIAVDGQGNAYIAGSTTSRNF PVRGALQATLTGYRNAFVAKLNPAGNGLVYSTYLGGNASDSANGIAVDSSGAAYVTGDTTSYSFPASGYQRGIHGGQDAF VAKLSADGSHLVYSTYLGGSGDDRGTAIALDGSGSAYITGSTFSIDFPVLFAAQQHGGGGQDAFVTRLSADGSFLWFSTY LGGSGGTVVSPEIGEAIAVDVQGNAYVAGVTSSADFPRLNALQTSLRGLSDAFVSKLTAAGALSYSTYLGGSGAETATGV AVDSSGNAYVSGYTYSTDLPVVSPVQAMNAGEYDAFVAELNSAGNALSYLSYLGGNGSDAASSIALDSSGTVYVAGWTLS TNFPLLNSYQLVNSGNYGMFVTKMIFSTTPVNVGVTPASGNGAGQVFSFQFADPAGATDLTSVGALFGVSAGTSGACAVS YDRVHNALFLLTDSGQAPAGSITPGSGTQQNSQCTLSGAGSTVALSGPTLTLNLALTFLPAFNGSKTVYMQAITPLASTA WQPKGAWSVTFAVTNVSVTPSAGSGATQLFSFQFSDEAGSNDLTSVSVLFNSSASTVTACSVTYDRARNALSLLTDAGQL PSASITPGSGTQQNQQCTLSGTGSSVVLSGRMLTLNLALTFLPAFSGTKNIYMQAISPFGSAP
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96178; Mature: 96178
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTCLTSILFLAGFAALSPGAEIPLLFMGNRGQAPAKVQFMVKGAGLDAYFLPGEVHLE CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEECCCEEEEE VPGRSLRIRLEGASPGHALKGKGRLSGRANFLTGSPSGWAVDIPLYESLVYRQVYPGIDL ECCCEEEEEEECCCCCCEECCCCCCCCCEEEEECCCCCEEEECHHHHHHHHHHHCCCCEE VYGGEGRKLKSEVVVAPGADPGLVRMRYLGGGAPWVDSDGSLVVRVGDRELREEPPVVYQ EECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEECCCCCEEEEECCHHHHCCCCEEEE ERDGAREPVVGRFVLLGNNVVGFGLGKYDRTRTLVIDPVLSYSTLLGGSGTDTASAVAVD CCCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEEECHHHHHHHCCCCCCCCCEEEEEE ASGAAYIAGYTDSTNLPAVNSAQSFNAGGNEVMVAKFSPGGNSLVYCTYLGGSADDRAYG CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEE IAVDGQGNAYIAGSTTSRNFPVRGALQATLTGYRNAFVAKLNPAGNGLVYSTYLGGNASD EEEECCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCC SANGIAVDSSGAAYVTGDTTSYSFPASGYQRGIHGGQDAFVAKLSADGSHLVYSTYLGGS CCCEEEEECCCCEEEECCCCCEECCCHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCC GDDRGTAIALDGSGSAYITGSTFSIDFPVLFAAQQHGGGGQDAFVTRLSADGSFLWFSTY CCCCCEEEEEECCCCEEEECCEEEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEE LGGSGGTVVSPEIGEAIAVDVQGNAYVAGVTSSADFPRLNALQTSLRGLSDAFVSKLTAA ECCCCCEEECCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GALSYSTYLGGSGAETATGVAVDSSGNAYVSGYTYSTDLPVVSPVQAMNAGEYDAFVAEL CCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHCCCCCHHHHHHHH NSAGNALSYLSYLGGNGSDAASSIALDSSGTVYVAGWTLSTNFPLLNSYQLVNSGNYGMF HCCCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCEEEEECCCCCEE VTKMIFSTTPVNVGVTPASGNGAGQVFSFQFADPAGATDLTSVGALFGVSAGTSGACAVS EEEEHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEE YDRVHNALFLLTDSGQAPAGSITPGSGTQQNSQCTLSGAGSTVALSGPTLTLNLALTFLP HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEEEEE AFNGSKTVYMQAITPLASTAWQPKGAWSVTFAVTNVSVTPSAGSGATQLFSFQFSDEAGS CCCCCCEEEEEEECHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCC NDLTSVSVLFNSSASTVTACSVTYDRARNALSLLTDAGQLPSASITPGSGTQQNQQCTLS CCCEEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEE GTGSSVVLSGRMLTLNLALTFLPAFSGTKNIYMQAISPFGSAP CCCCEEEEECEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MIRTCLTSILFLAGFAALSPGAEIPLLFMGNRGQAPAKVQFMVKGAGLDAYFLPGEVHLE CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEECCCEEEEE VPGRSLRIRLEGASPGHALKGKGRLSGRANFLTGSPSGWAVDIPLYESLVYRQVYPGIDL ECCCEEEEEEECCCCCCEECCCCCCCCCEEEEECCCCCEEEECHHHHHHHHHHHCCCCEE VYGGEGRKLKSEVVVAPGADPGLVRMRYLGGGAPWVDSDGSLVVRVGDRELREEPPVVYQ EECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEECCCCCEEEEECCHHHHCCCCEEEE ERDGAREPVVGRFVLLGNNVVGFGLGKYDRTRTLVIDPVLSYSTLLGGSGTDTASAVAVD CCCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEEECHHHHHHHCCCCCCCCCEEEEEE ASGAAYIAGYTDSTNLPAVNSAQSFNAGGNEVMVAKFSPGGNSLVYCTYLGGSADDRAYG CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEE IAVDGQGNAYIAGSTTSRNFPVRGALQATLTGYRNAFVAKLNPAGNGLVYSTYLGGNASD EEEECCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCC SANGIAVDSSGAAYVTGDTTSYSFPASGYQRGIHGGQDAFVAKLSADGSHLVYSTYLGGS CCCEEEEECCCCEEEECCCCCEECCCHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCC GDDRGTAIALDGSGSAYITGSTFSIDFPVLFAAQQHGGGGQDAFVTRLSADGSFLWFSTY CCCCCEEEEEECCCCEEEECCEEEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEE LGGSGGTVVSPEIGEAIAVDVQGNAYVAGVTSSADFPRLNALQTSLRGLSDAFVSKLTAA ECCCCCEEECCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GALSYSTYLGGSGAETATGVAVDSSGNAYVSGYTYSTDLPVVSPVQAMNAGEYDAFVAEL CCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHCCCCCHHHHHHHH NSAGNALSYLSYLGGNGSDAASSIALDSSGTVYVAGWTLSTNFPLLNSYQLVNSGNYGMF HCCCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCEEEEECCCCCEE VTKMIFSTTPVNVGVTPASGNGAGQVFSFQFADPAGATDLTSVGALFGVSAGTSGACAVS EEEEHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEE YDRVHNALFLLTDSGQAPAGSITPGSGTQQNSQCTLSGAGSTVALSGPTLTLNLALTFLP HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEEEEE AFNGSKTVYMQAITPLASTAWQPKGAWSVTFAVTNVSVTPSAGSGATQLFSFQFSDEAGS CCCCCCEEEEEEECHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCC NDLTSVSVLFNSSASTVTACSVTYDRARNALSLLTDAGQLPSASITPGSGTQQNQQCTLS CCCEEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEE GTGSSVVLSGRMLTLNLALTFLPAFSGTKNIYMQAISPFGSAP CCCCEEEEECEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA