| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is rsbX [H]
Identifier: 116619667
GI number: 116619667
Start: 640069
End: 641103
Strand: Direct
Name: rsbX [H]
Synonym: Acid_0530
Alternate gene names: 116619667
Gene position: 640069-641103 (Clockwise)
Preceding gene: 116619666
Following gene: 116619668
Centisome position: 6.42
GC content: 66.28
Gene sequence:
>1035_bases TTGAGCACGAATGTCGCCATTACGGTGCGGGAAAGCTCAGATGTCGGCGCTGCGCGCCGCGCTGCCGCCGCGCTTTCCCG CGCCCTGGACCTGGACTCCACCATCGCCGGACAGGCCGCCATCGTGGTCACCGAAGCCGCCACCAACCTGGTCAAGCACG GCGGCGGTGGTGTAATTCTGCTCAACCGAATCGGCGCCCCCGACAGCCCCGTGATGGAAATCCTGGCCCTCGACAAGGGC CCCGGCATGCACAGCGTCGAACGCTCCATGGAAGATGGCTACTCCACCGCCGGCAGTCCCGGCAACGGACTGGGTGCGAT TGCGCGCCTCTCCAGCTTTCACGACATCTATTCGTCTCCCGGACTCGGCACCGTCGTGCTCGCTCACCTGGGAAGTCCGC CCGCCGGTCCGCGGCGCCCCGCGCCCTCCCGCTTTCAGGTCGGCGCGGTCAGTGTGCCCAAGGGCGTCGAGCCTGTCTGC GGAGATGCCTGGGTTACCGAAGCCCGGGAGCACGGCCTGCGCGTGATCGTGGTCGATGGCTTGGGCCATGGCATGGGTGC CTTCGAAGCCTCCAAAGCCGCGCTCGAAATCGCCGCCGCCCATTCGCGGGATATGGCGCTCCCGTTGATGGAACGCATTC ACGCCGGCCTGCGCGCCACCCGCGGCGCCGCTGTTTCGGTCGCCGAGATCGATCTCGAACTGGGAAGCGTGACCTACGCC GGCCTTGGAAATGTCGCCGGTTCGCTGATCTCCCCCGGCGGCCTCCGCCGCCAGATGATCTCGTACAACGGTACCGCGGG CCACAACGCCCATAAAATTCGCGAGCTGAACTACCCCTGGGCTCCGGACACGATTCTCGTGATTCACTCCGACGGGCTCG CCACTCATTGGACTCTCGACAAATACCCCGGCCTGCATCGCCGCCACCCCAGCATTATCGCCGGCATCTTATTCCGCGAT TTCCAGCGCGGCACCGATGACGCCACGGTGGTGGTCGTGCGCTTCGCCGGCGGCACTCAAGAGGACAGGCTATGA
Upstream 100 bases:
>100_bases AGCGGCTCTCCAATGAATTTGAGATCGACTCACGCCCCGGCGAAGGTACACGGGTCACCATCGTCCGCTGGAAATAGTTC TGTCTTGGGGAGCCCTGAAG
Downstream 100 bases:
>100_bases CTTTCGACCAGCCATCTCGCACCGACCAGTCCGACGAAGCCGCCACTATCCCGATTCTCACGGTCAGCATCCTCGAGGAA TCCGACGTCGTTGCCGCCCG
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: Sigma-B negative effector [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSTNVAITVRESSDVGAARRAAAALSRALDLDSTIAGQAAIVVTEAATNLVKHGGGGVILLNRIGAPDSPVMEILALDKG PGMHSVERSMEDGYSTAGSPGNGLGAIARLSSFHDIYSSPGLGTVVLAHLGSPPAGPRRPAPSRFQVGAVSVPKGVEPVC GDAWVTEAREHGLRVIVVDGLGHGMGAFEASKAALEIAAAHSRDMALPLMERIHAGLRATRGAAVSVAEIDLELGSVTYA GLGNVAGSLISPGGLRRQMISYNGTAGHNAHKIRELNYPWAPDTILVIHSDGLATHWTLDKYPGLHRRHPSIIAGILFRD FQRGTDDATVVVVRFAGGTQEDRL
Sequences:
>Translated_344_residues MSTNVAITVRESSDVGAARRAAAALSRALDLDSTIAGQAAIVVTEAATNLVKHGGGGVILLNRIGAPDSPVMEILALDKG PGMHSVERSMEDGYSTAGSPGNGLGAIARLSSFHDIYSSPGLGTVVLAHLGSPPAGPRRPAPSRFQVGAVSVPKGVEPVC GDAWVTEAREHGLRVIVVDGLGHGMGAFEASKAALEIAAAHSRDMALPLMERIHAGLRATRGAAVSVAEIDLELGSVTYA GLGNVAGSLISPGGLRRQMISYNGTAGHNAHKIRELNYPWAPDTILVIHSDGLATHWTLDKYPGLHRRHPSIIAGILFRD FQRGTDDATVVVVRFAGGTQEDRL >Mature_343_residues STNVAITVRESSDVGAARRAAAALSRALDLDSTIAGQAAIVVTEAATNLVKHGGGGVILLNRIGAPDSPVMEILALDKGP GMHSVERSMEDGYSTAGSPGNGLGAIARLSSFHDIYSSPGLGTVVLAHLGSPPAGPRRPAPSRFQVGAVSVPKGVEPVCG DAWVTEAREHGLRVIVVDGLGHGMGAFEASKAALEIAAAHSRDMALPLMERIHAGLRATRGAAVSVAEIDLELGSVTYAG LGNVAGSLISPGGLRRQMISYNGTAGHNAHKIRELNYPWAPDTILVIHSDGLATHWTLDKYPGLHRRHPSIIAGILFRDF QRGTDDATVVVVRFAGGTQEDRL
Specific function: Negative regulator of sigma-B activity. Dephosphorylates rsbS. Plays a role both in maintaining low sigma-B activity during growth and in reestablishing prestress sigma-B activity after induction. Could have a negative feedback role by indirectly communic
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 35790; Mature: 35659
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNVAITVRESSDVGAARRAAAALSRALDLDSTIAGQAAIVVTEAATNLVKHGGGGVIL CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHCCCCCEEE LNRIGAPDSPVMEILALDKGPGMHSVERSMEDGYSTAGSPGNGLGAIARLSSFHDIYSSP EECCCCCCCHHEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC GLGTVVLAHLGSPPAGPRRPAPSRFQVGAVSVPKGVEPVCGDAWVTEAREHGLRVIVVDG CHHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECC LGHGMGAFEASKAALEIAAAHSRDMALPLMERIHAGLRATRGAAVSVAEIDLELGSVTYA CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEC GLGNVAGSLISPGGLRRQMISYNGTAGHNAHKIRELNYPWAPDTILVIHSDGLATHWTLD CHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHEECCCCCCCCEEEEEECCCCEEEEEHH KYPGLHRRHPSIIAGILFRDFQRGTDDATVVVVRFAGGTQEDRL CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure STNVAITVRESSDVGAARRAAAALSRALDLDSTIAGQAAIVVTEAATNLVKHGGGGVIL CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHCCCCCEEE LNRIGAPDSPVMEILALDKGPGMHSVERSMEDGYSTAGSPGNGLGAIARLSSFHDIYSSP EECCCCCCCHHEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC GLGTVVLAHLGSPPAGPRRPAPSRFQVGAVSVPKGVEPVCGDAWVTEAREHGLRVIVVDG CHHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECC LGHGMGAFEASKAALEIAAAHSRDMALPLMERIHAGLRATRGAAVSVAEIDLELGSVTYA CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEC GLGNVAGSLISPGGLRRQMISYNGTAGHNAHKIRELNYPWAPDTILVIHSDGLATHWTLD CHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHEECCCCCCCCEEEEEECCCCEEEEEHH KYPGLHRRHPSIIAGILFRDFQRGTDDATVVVVRFAGGTQEDRL CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2170324; 9384377; 3027048; 1592822; 8468294; 8824586; 9658013 [H]