| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619632
Identifier: 116619632
GI number: 116619632
Start: 605073
End: 605651
Strand: Direct
Name: 116619632
Synonym: Acid_0493
Alternate gene names: NA
Gene position: 605073-605651 (Clockwise)
Preceding gene: 116619631
Following gene: 116619633
Centisome position: 6.07
GC content: 61.83
Gene sequence:
>579_bases TTGCGCACTAATTACAGAATTGGCGCACTCGTGCTGCTCGCCGCCGGCCTTTCGGCCTGCCGCCAGGACATGCACGACCA GCCGAAATACATCCCGCTCCGCCCCAGTGATTTCTTCCAGGATGGCCGTTCCGCGCGCCCCCTGAGCGAAGGCACCATCG CGCGCGGCCACCTGAACGACGATCCCGCATTCTTCACCGGCAAGGGACCCGACGGAAAATTAATTACCTATTTTCCGATC GCGGTCAACAAGGACGTGATCCTGCGCGGCCAGCAGCGCTTCAATGTGTACTGCAGCCCGTGTCACGACCGCACCGGCAG CGGCAATGGGATGATTGTCCGCCGCGGATATCGCCGCCCCCCCAGTTACCATATGCAGCGGTTGATCGACCAACCGGACG GACACTTTTTCGACGTGATGACCAACGGATTCGGCGCCATGCCCGACTATGCCGTGCAGATTCAACCGCAGGACCGCTGG GCTATCGTGGCCTACATTCGCGCCCTGCAGTTGAGCCAGCAGGCCACTATCAATGATGTGCCCGCCGACGCGCGCGGCCA ACTCGGGGGTGCCAAATGA
Upstream 100 bases:
>100_bases AACCGTTTCTTCCTGTGCATCGAGTCCACCGACCCGCTGTTCGATCACGCCAAAACGTGCGAATTTCTGGAGACGCTGGA GCCCCGAGAGGTGTCTGAAG
Downstream 100 bases:
>100_bases TGGCCCGCACCGTGGACTATCGCATTCCCGCGGAACTGCAGACCGAGATGCGCCAGTGGCGCACGCGCTCCCTGGGTGTG GGTATTGCCGGCGCCGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRTNYRIGALVLLAAGLSACRQDMHDQPKYIPLRPSDFFQDGRSARPLSEGTIARGHLNDDPAFFTGKGPDGKLITYFPI AVNKDVILRGQQRFNVYCSPCHDRTGSGNGMIVRRGYRRPPSYHMQRLIDQPDGHFFDVMTNGFGAMPDYAVQIQPQDRW AIVAYIRALQLSQQATINDVPADARGQLGGAK
Sequences:
>Translated_192_residues MRTNYRIGALVLLAAGLSACRQDMHDQPKYIPLRPSDFFQDGRSARPLSEGTIARGHLNDDPAFFTGKGPDGKLITYFPI AVNKDVILRGQQRFNVYCSPCHDRTGSGNGMIVRRGYRRPPSYHMQRLIDQPDGHFFDVMTNGFGAMPDYAVQIQPQDRW AIVAYIRALQLSQQATINDVPADARGQLGGAK >Mature_192_residues MRTNYRIGALVLLAAGLSACRQDMHDQPKYIPLRPSDFFQDGRSARPLSEGTIARGHLNDDPAFFTGKGPDGKLITYFPI AVNKDVILRGQQRFNVYCSPCHDRTGSGNGMIVRRGYRRPPSYHMQRLIDQPDGHFFDVMTNGFGAMPDYAVQIQPQDRW AIVAYIRALQLSQQATINDVPADARGQLGGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21410; Mature: 21410
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTNYRIGALVLLAAGLSACRQDMHDQPKYIPLRPSDFFQDGRSARPLSEGTIARGHLND CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCCCCEEECCCCC DPAFFTGKGPDGKLITYFPIAVNKDVILRGQQRFNVYCSPCHDRTGSGNGMIVRRGYRRP CCCEEECCCCCCCEEEEEEEEECCCEEEECCEEEEEEEECCCCCCCCCCCEEEECCCCCC PSYHMQRLIDQPDGHFFDVMTNGFGAMPDYAVQIQPQDRWAIVAYIRALQLSQQATINDV HHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC PADARGQLGGAK CCCCCCCCCCCC >Mature Secondary Structure MRTNYRIGALVLLAAGLSACRQDMHDQPKYIPLRPSDFFQDGRSARPLSEGTIARGHLND CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCCCCEEECCCCC DPAFFTGKGPDGKLITYFPIAVNKDVILRGQQRFNVYCSPCHDRTGSGNGMIVRRGYRRP CCCEEECCCCCCCEEEEEEEEECCCEEEECCEEEEEEEECCCCCCCCCCCEEEECCCCCC PSYHMQRLIDQPDGHFFDVMTNGFGAMPDYAVQIQPQDRWAIVAYIRALQLSQQATINDV HHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC PADARGQLGGAK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA