| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is gmhB [H]
Identifier: 116619560
GI number: 116619560
Start: 522602
End: 523150
Strand: Direct
Name: gmhB [H]
Synonym: Acid_0421
Alternate gene names: 116619560
Gene position: 522602-523150 (Clockwise)
Preceding gene: 116619559
Following gene: 116619561
Centisome position: 5.24
GC content: 65.21
Gene sequence:
>549_bases GTGAGCAAAGCCGTATTCCTGGATCGCGACGGCGTGCTCAACGTGCCCGTGGTCCGCGACGGACGGCCCTATCCGCCTGC CGGGCTCGACCAGTTGCAAATTTACCCCGATGCGCCGGGCGCCCTGGCGTGCCTGAAACGCGCAGGCTATCTGCTGATCG TTGTCACCAATCAGCCGGACGTGGCGCGGGGCACTCAGAGTCGTGAGGCCGTGAACTCCATGAATGCCGCCGTCGGCGCG GCACTGCCGGTGGACGAGTTCCTGGTCTGCTGGCATGACGATGGCGAGGACTGCGACTGCCGCAAACCCAAACCCGGGCT GGTAATGGCCGCTGCCGAGCGGCACCAGATCGATCTGGCGCGGAGTTTCCTGGTTGGCGACCGCTGGCGCGACATCGATT GCGGCGCGGCGGCGGGTGTACGCACAGTGTGGATCGATCGCCAATACCGCGAAAGGGCCCCATCGTCTTCACCGGACCAC GTCGCCGATTCGCTGACTTCCGCAGCGTCATGGATCCTAGCGGTGTCGAAGATTACGCCAGGCGACTAG
Upstream 100 bases:
>100_bases ACGTCACGCCGCACTCGGAAGCCTTTCAGGCCGTGATCTGGCACCTTTTGGTCACGCACCCGGCGCTGAAGCAGGCCGAA ACCAAATGGGAATCAGTGAA
Downstream 100 bases:
>100_bases CCCGCGTGCCATAATGGCAGGCGGAGGCTCGCCGTGCGAGTTTTATCACTAATTCTGGCGCTCTGGATCCCGGCGGCTGC CCAGGTGGCACCCATGCTGA
Product: D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSKAVFLDRDGVLNVPVVRDGRPYPPAGLDQLQIYPDAPGALACLKRAGYLLIVVTNQPDVARGTQSREAVNSMNAAVGA ALPVDEFLVCWHDDGEDCDCRKPKPGLVMAAAERHQIDLARSFLVGDRWRDIDCGAAAGVRTVWIDRQYRERAPSSSPDH VADSLTSAASWILAVSKITPGD
Sequences:
>Translated_182_residues MSKAVFLDRDGVLNVPVVRDGRPYPPAGLDQLQIYPDAPGALACLKRAGYLLIVVTNQPDVARGTQSREAVNSMNAAVGA ALPVDEFLVCWHDDGEDCDCRKPKPGLVMAAAERHQIDLARSFLVGDRWRDIDCGAAAGVRTVWIDRQYRERAPSSSPDH VADSLTSAASWILAVSKITPGD >Mature_181_residues SKAVFLDRDGVLNVPVVRDGRPYPPAGLDQLQIYPDAPGALACLKRAGYLLIVVTNQPDVARGTQSREAVNSMNAAVGAA LPVDEFLVCWHDDGEDCDCRKPKPGLVMAAAERHQIDLARSFLVGDRWRDIDCGAAAGVRTVWIDRQYRERAPSSSPDHV ADSLTSAASWILAVSKITPGD
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=182, Percent_Identity=30.2197802197802, Blast_Score=81, Evalue=3e-17, Organism=Escherichia coli, GI87082027, Length=154, Percent_Identity=31.8181818181818, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 19666; Mature: 19535
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAVFLDRDGVLNVPVVRDGRPYPPAGLDQLQIYPDAPGALACLKRAGYLLIVVTNQPD CCCEEEEECCCEEECCEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEEEEECCCC VARGTQSREAVNSMNAAVGAALPVDEFLVCWHDDGEDCDCRKPKPGLVMAAAERHQIDLA CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHH RSFLVGDRWRDIDCGAAAGVRTVWIDRQYRERAPSSSPDHVADSLTSAASWILAVSKITP HHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCC GD CC >Mature Secondary Structure SKAVFLDRDGVLNVPVVRDGRPYPPAGLDQLQIYPDAPGALACLKRAGYLLIVVTNQPD CCEEEEECCCEEECCEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEEEEECCCC VARGTQSREAVNSMNAAVGAALPVDEFLVCWHDDGEDCDCRKPKPGLVMAAAERHQIDLA CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHH RSFLVGDRWRDIDCGAAAGVRTVWIDRQYRERAPSSSPDHVADSLTSAASWILAVSKITP HHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCC GD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]