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The map label for this gene is fliF [H]

Identifier: 116619481

GI number: 116619481

Start: 435221

End: 436933

Strand: Direct

Name: fliF [H]

Synonym: Acid_0340

Alternate gene names: 116619481

Gene position: 435221-436933 (Clockwise)

Preceding gene: 116619480

Following gene: 116619482

Centisome position: 4.37

GC content: 61.47

Gene sequence:

>1713_bases
ATGACCAAGATTCTGGCGAATCTCTCCGCTCGGCAAAGAATCACCATCGCGGTGGTTACCGTGGCGGTCGCCGCCGGCCT
GTACTCGTTCGTGCAATGGAGAAAAGAGGGCGATTTTCATCCCCTCTTTACCGGACTCTCGGCCGAGGACGCCGCGGGCA
TCGTTCAGAAGTTGAAAGAGAGCGGCGTCGAATACCGTCTGCCGGAAGGCGGTGGTTCCGTACTCGTTCCCTCCAACAAG
CTTGCCGACCTGCGCCTCACTATGGCCGGCATCGGACTGCCCAAATCCGGCCGCATAGGGTTCGAGCTTTTCGACAAGGT
GAACCTGGGCGCTACCGAGTTCACCGAACACATCAACTATCGCCGGGCCCTTGAGGGCGAGCTGGAGCGTACCGTGATGG
CTCTCGCCGAGGTCGAAACAGCCCGGGTCCACCTCACGTTTCCCAAGGATTCCGTCTTTCTCGAAGCCCAGCAGCCCGCC
AAAGCCAGTGTTCTGGTGCGTATACGGCCCGGTGCGAAACTTGCTCCACAAAATGTCCTGGCCATCACTCACCTCGTAGG
CAGCGCCGTCGAGGGCTTGAGCCCCGGTGCGGTGTCCGTGCTCGATATGAACGGCAACCTGCTCAACCGTCCCAAGGCTC
CCGGATTGCAGGACGGTTCCGAACCTTCCGCCGCAACTCTCGATTACCGCCACCAGGTCGAAACCGAGTTGCTTGCCAAG
GTCAACGCCACCCTTTCGCCGCTTCTCGGGCCCGAGAAGTTTCGCGTCGGCGTCTCCTTGGAGTGCGATTTCACGGGCGG
CGAGCAGAGTGAAGAGACCTTTGACCCGGCCCGAAGCGTCATGGTCACCTCGCAGCGCACCGAAGACTCGGTCGGGGGTA
CAACTGCCGCCGGAGTTCCCGGCACCGCCTCCACTTTGCCGCGTCCGACCTCCCGTCCGGCCACCGGCGCCAACAAGACC
GTCCGCACCACCGAGAACATCTCTTATCAATCCAGCCGCACCGTCAAAAAGACACATCTGCCTTCTGGCGTGGTGCGCAA
GATGTCTCTTGCCGTGCTTGTTGACCAGGATGTCAGCTGGGAGAAAGACAAGAATTCCTTCAAGCGGGTCCTGGTACCGC
CATCTCCGGAAAAGCTCAAGGTCATTCGCGACCTGGTCGCCGGCATTACCGGCTTCTCCCAGGAGCGTGGCGATCAGCTG
GTGATTGAAACCCTGCCCTTCGAGACCACGCTCCAACTGGAACCACCCGTAGCTGCCGTACCTGTGCCTCCGGCCAAGCC
GGGCTCTCCGCTACCCGGCCTGCCCATTCCTCTGGATCGCAAGACGCTGCTGATCGCCGCCGGCGTCGCGGCCGCAATGA
TCGTTTTCGGCGCCGGCCTCTTCGTTATGCGGCGCAAGCGTCGCAAGCAAACCGCTACCGTTGACATGGCTTCACGCCCA
ACTCTGCCTGCCGCCGCATCCCAGCCCGGCGCCGCCCCTTCCACCGAACTGCTCACCCAGGGCCAGATTGAGGAACAACT
GGAGTCGCAGCTTGCACAACGCGACGCACTGCAGGCAAAAATGGACGCGCAGGCTCTCACTTCCCTCAAACTCGCCCCCG
TAATCACGAAGAAAGCAGAAGTGCTGGCCAAGCACTTGCGCGAAAAAATCGCCAAAGAGCCCGAGATCTCCGTACAAGTC
CTGCGCACCTGGATCCGCGAGGAGGAAACCTGA

Upstream 100 bases:

>100_bases
CAGGAAATCATGCGCATGCCGATGTAGCCATCCGTAACCCTCACGTTTTCCCCCTTCCCATCCGATCTATCCCGTGAAGC
AAGAAGTCACGGACCTATTC

Downstream 100 bases:

>100_bases
GATCCGCAAAGAAGAGCCATGATCCTGAACACCACAAAGAGTGAAGCCGAGGCGCTGACCAATCTTCGCAAGGCCGCCAT
GCTGCTCGTCGTCCTGGGAG

Product: flagellar M-ring protein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 569

Protein sequence:

>570_residues
MTKILANLSARQRITIAVVTVAVAAGLYSFVQWRKEGDFHPLFTGLSAEDAAGIVQKLKESGVEYRLPEGGGSVLVPSNK
LADLRLTMAGIGLPKSGRIGFELFDKVNLGATEFTEHINYRRALEGELERTVMALAEVETARVHLTFPKDSVFLEAQQPA
KASVLVRIRPGAKLAPQNVLAITHLVGSAVEGLSPGAVSVLDMNGNLLNRPKAPGLQDGSEPSAATLDYRHQVETELLAK
VNATLSPLLGPEKFRVGVSLECDFTGGEQSEETFDPARSVMVTSQRTEDSVGGTTAAGVPGTASTLPRPTSRPATGANKT
VRTTENISYQSSRTVKKTHLPSGVVRKMSLAVLVDQDVSWEKDKNSFKRVLVPPSPEKLKVIRDLVAGITGFSQERGDQL
VIETLPFETTLQLEPPVAAVPVPPAKPGSPLPGLPIPLDRKTLLIAAGVAAAMIVFGAGLFVMRRKRRKQTATVDMASRP
TLPAAASQPGAAPSTELLTQGQIEEQLESQLAQRDALQAKMDAQALTSLKLAPVITKKAEVLAKHLREKIAKEPEISVQV
LRTWIREEET

Sequences:

>Translated_570_residues
MTKILANLSARQRITIAVVTVAVAAGLYSFVQWRKEGDFHPLFTGLSAEDAAGIVQKLKESGVEYRLPEGGGSVLVPSNK
LADLRLTMAGIGLPKSGRIGFELFDKVNLGATEFTEHINYRRALEGELERTVMALAEVETARVHLTFPKDSVFLEAQQPA
KASVLVRIRPGAKLAPQNVLAITHLVGSAVEGLSPGAVSVLDMNGNLLNRPKAPGLQDGSEPSAATLDYRHQVETELLAK
VNATLSPLLGPEKFRVGVSLECDFTGGEQSEETFDPARSVMVTSQRTEDSVGGTTAAGVPGTASTLPRPTSRPATGANKT
VRTTENISYQSSRTVKKTHLPSGVVRKMSLAVLVDQDVSWEKDKNSFKRVLVPPSPEKLKVIRDLVAGITGFSQERGDQL
VIETLPFETTLQLEPPVAAVPVPPAKPGSPLPGLPIPLDRKTLLIAAGVAAAMIVFGAGLFVMRRKRRKQTATVDMASRP
TLPAAASQPGAAPSTELLTQGQIEEQLESQLAQRDALQAKMDAQALTSLKLAPVITKKAEVLAKHLREKIAKEPEISVQV
LRTWIREEET
>Mature_569_residues
TKILANLSARQRITIAVVTVAVAAGLYSFVQWRKEGDFHPLFTGLSAEDAAGIVQKLKESGVEYRLPEGGGSVLVPSNKL
ADLRLTMAGIGLPKSGRIGFELFDKVNLGATEFTEHINYRRALEGELERTVMALAEVETARVHLTFPKDSVFLEAQQPAK
ASVLVRIRPGAKLAPQNVLAITHLVGSAVEGLSPGAVSVLDMNGNLLNRPKAPGLQDGSEPSAATLDYRHQVETELLAKV
NATLSPLLGPEKFRVGVSLECDFTGGEQSEETFDPARSVMVTSQRTEDSVGGTTAAGVPGTASTLPRPTSRPATGANKTV
RTTENISYQSSRTVKKTHLPSGVVRKMSLAVLVDQDVSWEKDKNSFKRVLVPPSPEKLKVIRDLVAGITGFSQERGDQLV
IETLPFETTLQLEPPVAAVPVPPAKPGSPLPGLPIPLDRKTLLIAAGVAAAMIVFGAGLFVMRRKRRKQTATVDMASRPT
LPAAASQPGAAPSTELLTQGQIEEQLESQLAQRDALQAKMDAQALTSLKLAPVITKKAEVLAKHLREKIAKEPEISVQVL
RTWIREEET

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=593, Percent_Identity=29.8482293423271, Blast_Score=249, Evalue=5e-67,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 61177; Mature: 61046

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKILANLSARQRITIAVVTVAVAAGLYSFVQWRKEGDFHPLFTGLSAEDAAGIVQKLKE
CCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHH
SGVEYRLPEGGGSVLVPSNKLADLRLTMAGIGLPKSGRIGFELFDKVNLGATEFTEHINY
CCCEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHH
RRALEGELERTVMALAEVETARVHLTFPKDSVFLEAQQPAKASVLVRIRPGAKLAPQNVL
HHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHH
AITHLVGSAVEGLSPGAVSVLDMNGNLLNRPKAPGLQDGSEPSAATLDYRHQVETELLAK
HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
VNATLSPLLGPEKFRVGVSLECDFTGGEQSEETFDPARSVMVTSQRTEDSVGGTTAAGVP
HCCHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCHHHHEEEECCCCCCCCCCCCCCCCC
GTASTLPRPTSRPATGANKTVRTTENISYQSSRTVKKTHLPSGVVRKMSLAVLVDQDVSW
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCHHHHHHHEEEEEEECCCCC
EKDKNSFKRVLVPPSPEKLKVIRDLVAGITGFSQERGDQLVIETLPFETTLQLEPPVAAV
CCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHCCCEEEEEECCCCEEEEECCCEEEE
PVPPAKPGSPLPGLPIPLDRKTLLIAAGVAAAMIVFGAGLFVMRRKRRKQTATVDMASRP
CCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCC
TLPAAASQPGAAPSTELLTQGQIEEQLESQLAQRDALQAKMDAQALTSLKLAPVITKKAE
CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAKHLREKIAKEPEISVQVLRTWIREEET
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKILANLSARQRITIAVVTVAVAAGLYSFVQWRKEGDFHPLFTGLSAEDAAGIVQKLKE
CCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHH
SGVEYRLPEGGGSVLVPSNKLADLRLTMAGIGLPKSGRIGFELFDKVNLGATEFTEHINY
CCCEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHH
RRALEGELERTVMALAEVETARVHLTFPKDSVFLEAQQPAKASVLVRIRPGAKLAPQNVL
HHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHH
AITHLVGSAVEGLSPGAVSVLDMNGNLLNRPKAPGLQDGSEPSAATLDYRHQVETELLAK
HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
VNATLSPLLGPEKFRVGVSLECDFTGGEQSEETFDPARSVMVTSQRTEDSVGGTTAAGVP
HCCHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCHHHHEEEECCCCCCCCCCCCCCCCC
GTASTLPRPTSRPATGANKTVRTTENISYQSSRTVKKTHLPSGVVRKMSLAVLVDQDVSW
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCHHHHHHHEEEEEEECCCCC
EKDKNSFKRVLVPPSPEKLKVIRDLVAGITGFSQERGDQLVIETLPFETTLQLEPPVAAV
CCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHCCCEEEEEECCCCEEEEECCCEEEE
PVPPAKPGSPLPGLPIPLDRKTLLIAAGVAAAMIVFGAGLFVMRRKRRKQTATVDMASRP
CCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCC
TLPAAASQPGAAPSTELLTQGQIEEQLESQLAQRDALQAKMDAQALTSLKLAPVITKKAE
CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAKHLREKIAKEPEISVQVLRTWIREEET
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]