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The map label for this gene is fliD [C]

Identifier: 116619471

GI number: 116619471

Start: 426082

End: 428040

Strand: Direct

Name: fliD [C]

Synonym: Acid_0330

Alternate gene names: 116619471

Gene position: 426082-428040 (Clockwise)

Preceding gene: 116619470

Following gene: 116619478

Centisome position: 4.28

GC content: 59.88

Gene sequence:

>1959_bases
ATGGCGACCTCAAGCAGCGGTATCTTCACCGGGTCCAGCCAGTTTTCGGCGGATTTTCAGAACGTGATTAGCCGGGCAAC
GGCCATCGCGTCGCTGCCGATTACCCAATTGAACACCGACAAGACGAACCTCAGCAGCCAGGCAACCGCATTGACCGGCC
TTGACGGTAAGTTCAAAGCGCTTCAATCCGCCATCCAAGGAATCGCCGACTCGCTCACGGGATCCGCTTTCCAGGCGACC
GTTTCGGACCCAACGAAAGCCGGTGTCAGTGTGAGCACAGGGGCCGCCGAAGGCGACTACACGATCGACGTAGTCAACGC
CGGGGTTTACGCTACCAGCATGACTGCCAGCAATTGGGTTGGGGGGACGGATTCCACACGTACCTATCAACTGTCCTTGG
GCGGCGTAAAATACTCTCTTTCGCCGGCGAACAATAGCGCCGCCAGTCTCGTTTCCGCGATCAACTCCAGTTATGGCGAT
AAGGTCCGTGCGACTCTGGTGAATGTCGGTAGCAGCGCGAGTCCGGATTACCGGATTTCCCTGCAGGCAGTCAAACTGGG
AGACCTGAAACCCGGGCTGCTCATCGGTTCGGTAAGCGCAGGCAACCTTCAAACCCAGCAGACCACCGGCTCAAATACAC
TCGCCACCAGCCAAACCGGCCAAAGCTGGGATTCTAATCCTGCGTTGAACTACCAACTTTCCATCGGAGGCACGGCTTAC
GACATTGTTACCAGCGACACGACCGCGCAGGGCGTGGCGGATGCCATCAACTCGCAGTTTGGTAACAAGGTGAAGGCTGC
GGTCGTGGACGTCGGCAATGGCACTTCGGATTACCGAATCAACCTGACCGCAGCTGGTCCCGGTAATACGCAGCCAGACA
TTTTGGCGGCCGATGGGATCTCGGGTCCCGCCAGCCTCCAGACCCAACTGACGGCTGGGTCCGATACCAGGTCCATCAGC
CAGACGGCCTCCCCGTGGGTCGCACCCGCGGGCCCGGCGCTCGGCTTCCAGCTCTCTCTCGGCGGCGTGAATTACAGCCT
GACGGTTGCCGACAACAGCCTGGATGGCGTGGTTTCGGCCCTGAACAGCCAGTACGGCAGCAAAATAACGGCCTCAAAGA
TCGACGTGGGAACCGGTGGAAGCCATGACTACCGGATCTCACTGACTACCGCCGCGCCCGGCGATCTTCAGCCGAATATC
GTGCTCTGCGCAAGCGATGTCCAGACGCAGCAAGCGACTGGCGCGATGGCGGACTACATTGTAAACAACTCCGGCCGACA
CGCGACCAGCGACACGCGCTCCGTGACAATTGCGACCGGCATCACGGTGACCCTCCTCGCCCGAGATAACGGGGCGCCCG
TAGATATCGTGGTGACGCGTCCGACCTCGGCGGTGAGCAGCGCGCTATCCGGCTTCGTTACCGCATACAATGACGCCGTC
GATGAGATTGACCAACAACACGGCACCAGCGTGGGGGCGTTGACAGGCCAATCCGCACTGGGCGCCCTTTCCCGCGTGCT
CAGTGGGATGGCGACCTATTCCCAGAACGCCTCCGGCATCTCCGGTCTGGCGGACCTCGGAATCGATCTCGATAAGACCG
GTCATCTCACGTTTAACCAGTTCACGCTGATTGGCACCGATCTCTCCAACTCGGCCGGCGTCGATGCCTTTCTCGGTTCC
ACCTCGAGCGGCTTCCTGAAGTTGGCGACCGACAGCCTGAATAGTGTGGAAGATTCCGTCACGGGCATTCTTCCAACCTG
GTCGGCAGGAGTGCAGGACCAGATCACAAACATTACGCAGACGATCGCGGACCAGCAGGCCCGCGTCGATCAGATGACCC
AGAGGATGACCGACCAGATCTCGGCGGCGGACGCCCTGATTGCCACTATGGAGCAGCAGTACAACTATTTGTCCGGAATG
TTCCAGGCGATGCAGACCGCCGATGCGCAGTATAAGTGA

Upstream 100 bases:

>100_bases
AGGCTGTAATGGCACTCCTCAGGGGCTAGCGGTGAACCAGTAACGTAGCCTGGCGGGAGAGCGTCGGCTTTCTCGCCGGA
GCCAATTATGGGAGTTGTTC

Downstream 100 bases:

>100_bases
GGCACGATCCATGGCAAGTGAAGCTCCGCAGAAGATCCGGGAAGCAATCGCTGCACAGGACTACAGCACGGCCCTCCAAC
AATGGAACGGCTACGTGACC

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 652; Mature: 651

Protein sequence:

>652_residues
MATSSSGIFTGSSQFSADFQNVISRATAIASLPITQLNTDKTNLSSQATALTGLDGKFKALQSAIQGIADSLTGSAFQAT
VSDPTKAGVSVSTGAAEGDYTIDVVNAGVYATSMTASNWVGGTDSTRTYQLSLGGVKYSLSPANNSAASLVSAINSSYGD
KVRATLVNVGSSASPDYRISLQAVKLGDLKPGLLIGSVSAGNLQTQQTTGSNTLATSQTGQSWDSNPALNYQLSIGGTAY
DIVTSDTTAQGVADAINSQFGNKVKAAVVDVGNGTSDYRINLTAAGPGNTQPDILAADGISGPASLQTQLTAGSDTRSIS
QTASPWVAPAGPALGFQLSLGGVNYSLTVADNSLDGVVSALNSQYGSKITASKIDVGTGGSHDYRISLTTAAPGDLQPNI
VLCASDVQTQQATGAMADYIVNNSGRHATSDTRSVTIATGITVTLLARDNGAPVDIVVTRPTSAVSSALSGFVTAYNDAV
DEIDQQHGTSVGALTGQSALGALSRVLSGMATYSQNASGISGLADLGIDLDKTGHLTFNQFTLIGTDLSNSAGVDAFLGS
TSSGFLKLATDSLNSVEDSVTGILPTWSAGVQDQITNITQTIADQQARVDQMTQRMTDQISAADALIATMEQQYNYLSGM
FQAMQTADAQYK

Sequences:

>Translated_652_residues
MATSSSGIFTGSSQFSADFQNVISRATAIASLPITQLNTDKTNLSSQATALTGLDGKFKALQSAIQGIADSLTGSAFQAT
VSDPTKAGVSVSTGAAEGDYTIDVVNAGVYATSMTASNWVGGTDSTRTYQLSLGGVKYSLSPANNSAASLVSAINSSYGD
KVRATLVNVGSSASPDYRISLQAVKLGDLKPGLLIGSVSAGNLQTQQTTGSNTLATSQTGQSWDSNPALNYQLSIGGTAY
DIVTSDTTAQGVADAINSQFGNKVKAAVVDVGNGTSDYRINLTAAGPGNTQPDILAADGISGPASLQTQLTAGSDTRSIS
QTASPWVAPAGPALGFQLSLGGVNYSLTVADNSLDGVVSALNSQYGSKITASKIDVGTGGSHDYRISLTTAAPGDLQPNI
VLCASDVQTQQATGAMADYIVNNSGRHATSDTRSVTIATGITVTLLARDNGAPVDIVVTRPTSAVSSALSGFVTAYNDAV
DEIDQQHGTSVGALTGQSALGALSRVLSGMATYSQNASGISGLADLGIDLDKTGHLTFNQFTLIGTDLSNSAGVDAFLGS
TSSGFLKLATDSLNSVEDSVTGILPTWSAGVQDQITNITQTIADQQARVDQMTQRMTDQISAADALIATMEQQYNYLSGM
FQAMQTADAQYK
>Mature_651_residues
ATSSSGIFTGSSQFSADFQNVISRATAIASLPITQLNTDKTNLSSQATALTGLDGKFKALQSAIQGIADSLTGSAFQATV
SDPTKAGVSVSTGAAEGDYTIDVVNAGVYATSMTASNWVGGTDSTRTYQLSLGGVKYSLSPANNSAASLVSAINSSYGDK
VRATLVNVGSSASPDYRISLQAVKLGDLKPGLLIGSVSAGNLQTQQTTGSNTLATSQTGQSWDSNPALNYQLSIGGTAYD
IVTSDTTAQGVADAINSQFGNKVKAAVVDVGNGTSDYRINLTAAGPGNTQPDILAADGISGPASLQTQLTAGSDTRSISQ
TASPWVAPAGPALGFQLSLGGVNYSLTVADNSLDGVVSALNSQYGSKITASKIDVGTGGSHDYRISLTTAAPGDLQPNIV
LCASDVQTQQATGAMADYIVNNSGRHATSDTRSVTIATGITVTLLARDNGAPVDIVVTRPTSAVSSALSGFVTAYNDAVD
EIDQQHGTSVGALTGQSALGALSRVLSGMATYSQNASGISGLADLGIDLDKTGHLTFNQFTLIGTDLSNSAGVDAFLGST
SSGFLKLATDSLNSVEDSVTGILPTWSAGVQDQITNITQTIADQQARVDQMTQRMTDQISAADALIATMEQQYNYLSGMF
QAMQTADAQYK

Specific function: Required For The Morphogenesis And For The Elongation Of The Flagellar Filament By Facilitating Polymerization Of The Flagellin Monomers At The Tip Of Growing Filament. Forms A Capping Structure, Which Prevents Flagellin Subunits (Transported Through The

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Flagellar [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66522; Mature: 66391

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSSSGIFTGSSQFSADFQNVISRATAIASLPITQLNTDKTNLSSQATALTGLDGKFKA
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCCHHHH
LQSAIQGIADSLTGSAFQATVSDPTKAGVSVSTGAAEGDYTIDVVNAGVYATSMTASNWV
HHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCEEEEECCCCCCC
GGTDSTRTYQLSLGGVKYSLSPANNSAASLVSAINSSYGDKVRATLVNVGSSASPDYRIS
CCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEE
LQAVKLGDLKPGLLIGSVSAGNLQTQQTTGSNTLATSQTGQSWDSNPALNYQLSIGGTAY
EEEEEECCCCCCEEEEECCCCCEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCEEE
DIVTSDTTAQGVADAINSQFGNKVKAAVVDVGNGTSDYRINLTAAGPGNTQPDILAADGI
EEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEECCC
SGPASLQTQLTAGSDTRSISQTASPWVAPAGPALGFQLSLGGVNYSLTVADNSLDGVVSA
CCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHH
LNSQYGSKITASKIDVGTGGSHDYRISLTTAAPGDLQPNIVLCASDVQTQQATGAMADYI
HHHHHCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHH
VNNSGRHATSDTRSVTIATGITVTLLARDNGAPVDIVVTRPTSAVSSALSGFVTAYNDAV
CCCCCCCCCCCCCEEEEEECEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
DEIDQQHGTSVGALTGQSALGALSRVLSGMATYSQNASGISGLADLGIDLDKTGHLTFNQ
HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCEEEEE
FTLIGTDLSNSAGVDAFLGSTSSGFLKLATDSLNSVEDSVTGILPTWSAGVQDQITNITQ
EEEEECCCCCCCCCCCEECCCCCCEEEEECCCHHHHHHHHHEECCCCCCCHHHHHHHHHH
TIADQQARVDQMTQRMTDQISAADALIATMEQQYNYLSGMFQAMQTADAQYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATSSSGIFTGSSQFSADFQNVISRATAIASLPITQLNTDKTNLSSQATALTGLDGKFKA
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCCHHHH
LQSAIQGIADSLTGSAFQATVSDPTKAGVSVSTGAAEGDYTIDVVNAGVYATSMTASNWV
HHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCEEEEECCCCCCC
GGTDSTRTYQLSLGGVKYSLSPANNSAASLVSAINSSYGDKVRATLVNVGSSASPDYRIS
CCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEE
LQAVKLGDLKPGLLIGSVSAGNLQTQQTTGSNTLATSQTGQSWDSNPALNYQLSIGGTAY
EEEEEECCCCCCEEEEECCCCCEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCEEE
DIVTSDTTAQGVADAINSQFGNKVKAAVVDVGNGTSDYRINLTAAGPGNTQPDILAADGI
EEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEECCC
SGPASLQTQLTAGSDTRSISQTASPWVAPAGPALGFQLSLGGVNYSLTVADNSLDGVVSA
CCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHH
LNSQYGSKITASKIDVGTGGSHDYRISLTTAAPGDLQPNIVLCASDVQTQQATGAMADYI
HHHHHCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHH
VNNSGRHATSDTRSVTIATGITVTLLARDNGAPVDIVVTRPTSAVSSALSGFVTAYNDAV
CCCCCCCCCCCCCEEEEEECEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
DEIDQQHGTSVGALTGQSALGALSRVLSGMATYSQNASGISGLADLGIDLDKTGHLTFNQ
HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCEEEEE
FTLIGTDLSNSAGVDAFLGSTSSGFLKLATDSLNSVEDSVTGILPTWSAGVQDQITNITQ
EEEEECCCCCCCCCCCEECCCCCCEEEEECCCHHHHHHHHHEECCCCCCCHHHHHHHHHH
TIADQQARVDQMTQRMTDQISAADALIATMEQQYNYLSGMFQAMQTADAQYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA