Click here to switch to the map view.

The map label for this gene is fliC [H]

Identifier: 116619468

GI number: 116619468

Start: 419737

End: 422427

Strand: Direct

Name: fliC [H]

Synonym: Acid_0327

Alternate gene names: 116619468

Gene position: 419737-422427 (Clockwise)

Preceding gene: 116619467

Following gene: 116619469

Centisome position: 4.21

GC content: 62.43

Gene sequence:

>2691_bases
ATGTCTTTTTCGATTCAGACCAACGTAAACTCCGTCGTTGCGCAGGAGAATCTGCGCGTGAACAGCAATTTTCAGGCGCA
GACCATTCAGCGGTTGACTTCGGGCTACCGCATCAACTCCTCGGCCGACGATGCCGCGGGTTTGGCAATTGCCAACAAAT
TCCGCAACGATACGGCGGAATTGACGCAGGGCGTACGCAATGCGAACGATGGCGTATCGCAGTTGCAGATTATGGACGGC
GGCATGAACAACATCGGCAAGATGCTTGACCGCCTGAAAACCCTGGCCACGCAGTCGGCCTCGGACTCCTTCACGGGCGA
CCGCAGCGTATTGAATAAGGAATATCAGACGCTGGTAGGGGAAATCGACCGTCAGTCGCAGGCCATAGGGCTTTCGACCG
GCGGCCACTTTGCCAAGAGCCTGAACGTGTATATCGGCGGCGGCACGAACGCCGCGGGTGCGTCGGACACGAACAATGGG
ATGGTCGGACTCGACTTGGCGAACTCAGTGGTGGATTCCAAGGCGCTCGGCCTGCGCACCTCGGAATTCAAGGCCAGTCC
GGCTGTCGGCACTAACCTTTCGGCCGCGTCCAATACCAGTATTGCCAATATTGTGACCGCCAACAGCGGTGACAGTGGCG
CCGCGACCTTCCAGCTCTCGGGAGCAGGGTTCTCCGGCGTGAAGGTTTCCATCACCGCCACGGCGTCCGACACCACGGCG
ACGCTTACGGATAAATTGAACTCCGCGATCCAGGCCGCCGGCAACGCGGGCGGGGCTTCCGCCAATGCTCTGCGTACCGC
CAATATCAAGGCGAACGCAGTCACCGATAGCAGCGGCAACCAGCAGATCACGTTCACCTCCTCCGGTTCGGCCTTCCAGG
CTACCGCGGGCACGGCAACTGCCAACGCGATCATGGGAAATTTCGATACCACCTCCACCAATCCGGCAAAGGGCGCATCC
GTCAGCCAGTCGGTGCAGGGTGCGGCGGTTGGCGCGGGCGCGTCGCTGAACTATGTCAACCTGAAGGTTTTCGTGGATGG
AGCGGAAAGAGACCTCAACGTAAAACTCGCCGCGACCGACGACACGGACGGGGAATTTCAGGTGGCTGTGCGCGGCACGA
ACGGCTATGCCGCACTCGCCAACCTCGGCGTCACGGCCACCGTGGATACCACCACGCATAAGCTGAATTTCACGGGCAAT
AGCAACCAGAGCATTCACGTGGAAGCGGCGGGCGACACCGCCAACACCCTCGGCTTCGGCGCCTGGCAGCAGGGGACGGC
GGTCACGGGAGGCACGGCGGCTGCACCGGGGGCAGCCCAGACCGCCACCATGACGCTGCATGTGGACGGCACGGACTATA
ACCTGAGTGTAACCACGGATGCATCGGAAACCACGGCGGCCGATGTGCTGGGCAAGGTGACGGGCGACGCGTCCTATACG
GCGCTGCACGCGGCGGGGATCACGGCATCGGTGGACGGCAACAACCACATCGTCTTCTCCGGCAAGGCCGGACAGGCAAT
CTCGGTGACGGCGGTGGGTGATGCTGGTAATGTGCTCGGGTACGGTGTCGGGTCCTCCACGGCGACGGCGAGCTACGGCA
CGATTACGCCGGGCGCGGCGCTGAATGCGGGCTCGGCGAACGACAAAGCGACGCTGGCGTTCTCCATCAACGGTGGGGAC
AAGATTCTGGTCAGCGTCACGTCCACAGGCAACTTGGGAACCACGGCCACGGCGCTGCAAGCGGCGATCGATGCCAACCA
GCAGTTGCATGCGGCGGGCATCACGGTGGGCGCGAACCTGGCCACCATCTCGGCGGGGGCATCCACCACGAACTTCCGCA
TGACGGTAGAGAGCCAGTCCGGCACACTCAATCTCGGGTTGGGCACCGGTGTCTCTTCTTCAGCCGCCTACCGCGCGGTC
GATAAAGCCTCAATGCTGGCCTCCGCCGGCTCTTCGCAGACCGGCCTCGGCCCGACTAATGACGTGTTCAGCTTTACCGG
CTTGACCAACAAGGGCGGTGCGTCGGGCGCCAATGCCGATCAGCAGGTGATCAGTTTCGGAGCTGCCGCGGCCGATGGTA
CCGCGAAATCGGCCTCCGTCACACTGAACGCTACCAATGCCCAAAACGTAGACACCGCGATTGCCACAATCAATAGCGGT
CTCCAGGCCAGCGGCGACCCGACCTTGAAACAGATTGTGGCGGTGAAGGAAACCAACGCCAGCGGCACCGCCGAAGGCAT
CCGTTTCATCAGCTCGCTGAATAACTTCTCGGTCGGCGTGGGAACGGCCAATAACAGCACCGCCCAAGTCTCCGTCGGTA
TGTTCGACGGCACGGCCGGCGCCACCGCCAAGCAGGGAACCACGGTCCAATCCGGCAATAGCGGCGCTGCCGACATCAGC
ACCAAGGATGGCGCGACGCAGGCCGTCATCACCCTGGGTAACGCGGTAAAGCAACTCGGCGTCGCCCAGGCGGCTATCGG
TAAAGGACAGAACCAGCTGAGCTATGCGATCGGGCTGGCGCAATCCCAGATCAGTAACTTCTCCGCCGCGCAATCGCAGA
TTCGCGATGCCGACGTGGCGGCGGAAGCGGCGAACTTGACGAAGGCCCAGGTGCTGCAGCAGGCCAGCATGGCTGCGATG
GCCCAGGCGAACTCCGCTCCTCAGGCTGTGATGGCACTCCTGAGAGGCTAG

Upstream 100 bases:

>100_bases
CCCGAAAATCTGCCCTCCGTTCTCAGACTTCCGCTGAGCGTACCGATGAGTAAGTTGAACCGGCAAGATGCCGGCAAATA
AAAACTGAAAGGACTTCACC

Downstream 100 bases:

>100_bases
CAGTGAACCAGTAATGTAAACCGGCGGGAGCGCCTTAGGCCCTCTCGCCGGATCTGTTCAGAGTTGGCTTACTCCCTTGG
CTTACCACCCCCCGAAACCC

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 896; Mature: 895

Protein sequence:

>896_residues
MSFSIQTNVNSVVAQENLRVNSNFQAQTIQRLTSGYRINSSADDAAGLAIANKFRNDTAELTQGVRNANDGVSQLQIMDG
GMNNIGKMLDRLKTLATQSASDSFTGDRSVLNKEYQTLVGEIDRQSQAIGLSTGGHFAKSLNVYIGGGTNAAGASDTNNG
MVGLDLANSVVDSKALGLRTSEFKASPAVGTNLSAASNTSIANIVTANSGDSGAATFQLSGAGFSGVKVSITATASDTTA
TLTDKLNSAIQAAGNAGGASANALRTANIKANAVTDSSGNQQITFTSSGSAFQATAGTATANAIMGNFDTTSTNPAKGAS
VSQSVQGAAVGAGASLNYVNLKVFVDGAERDLNVKLAATDDTDGEFQVAVRGTNGYAALANLGVTATVDTTTHKLNFTGN
SNQSIHVEAAGDTANTLGFGAWQQGTAVTGGTAAAPGAAQTATMTLHVDGTDYNLSVTTDASETTAADVLGKVTGDASYT
ALHAAGITASVDGNNHIVFSGKAGQAISVTAVGDAGNVLGYGVGSSTATASYGTITPGAALNAGSANDKATLAFSINGGD
KILVSVTSTGNLGTTATALQAAIDANQQLHAAGITVGANLATISAGASTTNFRMTVESQSGTLNLGLGTGVSSSAAYRAV
DKASMLASAGSSQTGLGPTNDVFSFTGLTNKGGASGANADQQVISFGAAAADGTAKSASVTLNATNAQNVDTAIATINSG
LQASGDPTLKQIVAVKETNASGTAEGIRFISSLNNFSVGVGTANNSTAQVSVGMFDGTAGATAKQGTTVQSGNSGAADIS
TKDGATQAVITLGNAVKQLGVAQAAIGKGQNQLSYAIGLAQSQISNFSAAQSQIRDADVAAEAANLTKAQVLQQASMAAM
AQANSAPQAVMALLRG

Sequences:

>Translated_896_residues
MSFSIQTNVNSVVAQENLRVNSNFQAQTIQRLTSGYRINSSADDAAGLAIANKFRNDTAELTQGVRNANDGVSQLQIMDG
GMNNIGKMLDRLKTLATQSASDSFTGDRSVLNKEYQTLVGEIDRQSQAIGLSTGGHFAKSLNVYIGGGTNAAGASDTNNG
MVGLDLANSVVDSKALGLRTSEFKASPAVGTNLSAASNTSIANIVTANSGDSGAATFQLSGAGFSGVKVSITATASDTTA
TLTDKLNSAIQAAGNAGGASANALRTANIKANAVTDSSGNQQITFTSSGSAFQATAGTATANAIMGNFDTTSTNPAKGAS
VSQSVQGAAVGAGASLNYVNLKVFVDGAERDLNVKLAATDDTDGEFQVAVRGTNGYAALANLGVTATVDTTTHKLNFTGN
SNQSIHVEAAGDTANTLGFGAWQQGTAVTGGTAAAPGAAQTATMTLHVDGTDYNLSVTTDASETTAADVLGKVTGDASYT
ALHAAGITASVDGNNHIVFSGKAGQAISVTAVGDAGNVLGYGVGSSTATASYGTITPGAALNAGSANDKATLAFSINGGD
KILVSVTSTGNLGTTATALQAAIDANQQLHAAGITVGANLATISAGASTTNFRMTVESQSGTLNLGLGTGVSSSAAYRAV
DKASMLASAGSSQTGLGPTNDVFSFTGLTNKGGASGANADQQVISFGAAAADGTAKSASVTLNATNAQNVDTAIATINSG
LQASGDPTLKQIVAVKETNASGTAEGIRFISSLNNFSVGVGTANNSTAQVSVGMFDGTAGATAKQGTTVQSGNSGAADIS
TKDGATQAVITLGNAVKQLGVAQAAIGKGQNQLSYAIGLAQSQISNFSAAQSQIRDADVAAEAANLTKAQVLQQASMAAM
AQANSAPQAVMALLRG
>Mature_895_residues
SFSIQTNVNSVVAQENLRVNSNFQAQTIQRLTSGYRINSSADDAAGLAIANKFRNDTAELTQGVRNANDGVSQLQIMDGG
MNNIGKMLDRLKTLATQSASDSFTGDRSVLNKEYQTLVGEIDRQSQAIGLSTGGHFAKSLNVYIGGGTNAAGASDTNNGM
VGLDLANSVVDSKALGLRTSEFKASPAVGTNLSAASNTSIANIVTANSGDSGAATFQLSGAGFSGVKVSITATASDTTAT
LTDKLNSAIQAAGNAGGASANALRTANIKANAVTDSSGNQQITFTSSGSAFQATAGTATANAIMGNFDTTSTNPAKGASV
SQSVQGAAVGAGASLNYVNLKVFVDGAERDLNVKLAATDDTDGEFQVAVRGTNGYAALANLGVTATVDTTTHKLNFTGNS
NQSIHVEAAGDTANTLGFGAWQQGTAVTGGTAAAPGAAQTATMTLHVDGTDYNLSVTTDASETTAADVLGKVTGDASYTA
LHAAGITASVDGNNHIVFSGKAGQAISVTAVGDAGNVLGYGVGSSTATASYGTITPGAALNAGSANDKATLAFSINGGDK
ILVSVTSTGNLGTTATALQAAIDANQQLHAAGITVGANLATISAGASTTNFRMTVESQSGTLNLGLGTGVSSSAAYRAVD
KASMLASAGSSQTGLGPTNDVFSFTGLTNKGGASGANADQQVISFGAAAADGTAKSASVTLNATNAQNVDTAIATINSGL
QASGDPTLKQIVAVKETNASGTAEGIRFISSLNNFSVGVGTANNSTAQVSVGMFDGTAGATAKQGTTVQSGNSGAADIST
KDGATQAVITLGNAVKQLGVAQAAIGKGQNQLSYAIGLAQSQISNFSAAQSQIRDADVAAEAANLTKAQVLQQASMAAMA
QANSAPQAVMALLRG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=336, Percent_Identity=32.4404761904762, Blast_Score=97, Evalue=4e-21,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR014981 [H]

Pfam domain/function: PF00700 Flagellin_C; PF08884 Flagellin_D3; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 88708; Mature: 88577

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSIQTNVNSVVAQENLRVNSNFQAQTIQRLTSGYRINSSADDAAGLAIANKFRNDTAE
CCEEEECCCHHHEECCCEEECCCCHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCHHH
LTQGVRNANDGVSQLQIMDGGMNNIGKMLDRLKTLATQSASDSFTGDRSVLNKEYQTLVG
HHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
EIDRQSQAIGLSTGGHFAKSLNVYIGGGTNAAGASDTNNGMVGLDLANSVVDSKALGLRT
HHCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCC
SEFKASPAVGTNLSAASNTSIANIVTANSGDSGAATFQLSGAGFSGVKVSITATASDTTA
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEECCCCEE
TLTDKLNSAIQAAGNAGGASANALRTANIKANAVTDSSGNQQITFTSSGSAFQATAGTAT
HHHHHHHHHHHHCCCCCCCCCCEEEEECEEEEEEECCCCCEEEEEECCCCEEEEECCCCC
ANAIMGNFDTTSTNPAKGASVSQSVQGAAVGAGASLNYVNLKVFVDGAERDLNVKLAATD
HHHEECCCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEEEEEEEEECCCCCEEEEEEECC
DTDGEFQVAVRGTNGYAALANLGVTATVDTTTHKLNFTGNSNQSIHVEAAGDTANTLGFG
CCCCEEEEEEECCCCEEEEECCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCCCCCCC
AWQQGTAVTGGTAAAPGAAQTATMTLHVDGTDYNLSVTTDASETTAADVLGKVTGDASYT
CCCCCCEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE
ALHAAGITASVDGNNHIVFSGKAGQAISVTAVGDAGNVLGYGVGSSTATASYGTITPGAA
EEEECCEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCE
LNAGSANDKATLAFSINGGDKILVSVTSTGNLGTTATALQAAIDANQQLHAAGITVGANL
ECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCE
ATISAGASTTNFRMTVESQSGTLNLGLGTGVSSSAAYRAVDKASMLASAGSSQTGLGPTN
EEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
DVFSFTGLTNKGGASGANADQQVISFGAAAADGTAKSASVTLNATNAQNVDTAIATINSG
CCEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCC
LQASGDPTLKQIVAVKETNASGTAEGIRFISSLNNFSVGVGTANNSTAQVSVGMFDGTAG
CCCCCCHHHHHEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCC
ATAKQGTTVQSGNSGAADISTKDGATQAVITLGNAVKQLGVAQAAIGKGQNQLSYAIGLA
CCCCCCCEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEHEEHHH
QSQISNFSAAQSQIRDADVAAEAANLTKAQVLQQASMAAMAQANSAPQAVMALLRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
SFSIQTNVNSVVAQENLRVNSNFQAQTIQRLTSGYRINSSADDAAGLAIANKFRNDTAE
CEEEECCCHHHEECCCEEECCCCHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCHHH
LTQGVRNANDGVSQLQIMDGGMNNIGKMLDRLKTLATQSASDSFTGDRSVLNKEYQTLVG
HHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
EIDRQSQAIGLSTGGHFAKSLNVYIGGGTNAAGASDTNNGMVGLDLANSVVDSKALGLRT
HHCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCC
SEFKASPAVGTNLSAASNTSIANIVTANSGDSGAATFQLSGAGFSGVKVSITATASDTTA
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEECCCCEE
TLTDKLNSAIQAAGNAGGASANALRTANIKANAVTDSSGNQQITFTSSGSAFQATAGTAT
HHHHHHHHHHHHCCCCCCCCCCEEEEECEEEEEEECCCCCEEEEEECCCCEEEEECCCCC
ANAIMGNFDTTSTNPAKGASVSQSVQGAAVGAGASLNYVNLKVFVDGAERDLNVKLAATD
HHHEECCCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEEEEEEEEECCCCCEEEEEEECC
DTDGEFQVAVRGTNGYAALANLGVTATVDTTTHKLNFTGNSNQSIHVEAAGDTANTLGFG
CCCCEEEEEEECCCCEEEEECCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCCCCCCC
AWQQGTAVTGGTAAAPGAAQTATMTLHVDGTDYNLSVTTDASETTAADVLGKVTGDASYT
CCCCCCEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE
ALHAAGITASVDGNNHIVFSGKAGQAISVTAVGDAGNVLGYGVGSSTATASYGTITPGAA
EEEECCEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCE
LNAGSANDKATLAFSINGGDKILVSVTSTGNLGTTATALQAAIDANQQLHAAGITVGANL
ECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCE
ATISAGASTTNFRMTVESQSGTLNLGLGTGVSSSAAYRAVDKASMLASAGSSQTGLGPTN
EEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
DVFSFTGLTNKGGASGANADQQVISFGAAAADGTAKSASVTLNATNAQNVDTAIATINSG
CCEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCC
LQASGDPTLKQIVAVKETNASGTAEGIRFISSLNNFSVGVGTANNSTAQVSVGMFDGTAG
CCCCCCHHHHHEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCC
ATAKQGTTVQSGNSGAADISTKDGATQAVITLGNAVKQLGVAQAAIGKGQNQLSYAIGLA
CCCCCCCEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEHEEHHH
QSQISNFSAAQSQIRDADVAAEAANLTKAQVLQQASMAAMAQANSAPQAVMALLRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3536885; 2659972; 9097040; 9278503; 6305924; 9298646; 9600841 [H]