| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619436
Identifier: 116619436
GI number: 116619436
Start: 394843
End: 395649
Strand: Direct
Name: 116619436
Synonym: Acid_0295
Alternate gene names: NA
Gene position: 394843-395649 (Clockwise)
Preceding gene: 116619435
Following gene: 116619437
Centisome position: 3.96
GC content: 62.7
Gene sequence:
>807_bases GTGCGAGGTAGTGTGGTTCCCATTAACGGGCGCCGGGAGGGCACTTATGTGCTCCTGGAGACTGCTCTGCCCGGGCGATC CCCATGCGCGATCGGCGTGCTGCTGATCGATCCGGAAAATGATCGAGCCTGGTTCCGGATGCGGAATGACTTCGCGAGGA TCGCGGACGAGGATGATATCGAAGTCCTGGAAGCGATGGAAGCGCACGTCCTGCAATGCATCAGCGAGACCGGTGCGGAG GCCTACCTGAAGTCGCTCGAGGAGTCGGTTTCCAATGCGTTGCGGATCACCGAAAGACAGAGCGTCGCGGTGGATGCGTT CTCTCGGGTGTTGGACCGTCTCTACCAGGAAAACGTGGAAGCGGTGGCGGTGAAGCCGTTTCGCACGCATCTCCCGCTCT ACAGTTTTCGCGCGGCGGCGGGCGGGCTGAGCGAAGAGATGGAATCCGCGGTGGAAGATTGGGTGCCGGCGCCGGAAGGC ATGCAGCTCTCGCCCGATCTCTTCGTGGGGCACGTGGCCGGGCGGTCGATGGAGCCCCGCATTCCCGATGGCAGCCTGAA TCTCTTCCGGCTGCACCCGGCGGGTTCGCGGCAGGGCAAGATCCTGCTGATCGAACGCTTCGGCGTGTTGGATGAGACTG CCCGCTACACCATCAAGCGCTATACCAGCCGCAAGGTCTACCGCTCGGAAGACGAGTGGCAGCACGAAAATGTCCGGCTG GAACCGTTGAACCCCGAGTTCGAAGCCTGGGATGTGGAGCCCGAGGGCTTCGCCGTGGTTGCCGAATGGCTGCGCGTCAT CGAGTGA
Upstream 100 bases:
>100_bases GGTTTTCTCTGCGTGACTCTGCGGCTTTGCGGCTTTGCGAGAGACTGACGTCCTCAAGGGCGGTACTCTTCGCGCCGATA AGCGGAGTAGGATAGAAAGC
Downstream 100 bases:
>100_bases GTGGCCCTTCGCTGAGCAGCCTGCTGTTGGCCTGGTATCGCGCGGCGCATCGCGACCTGCCGTGGCGGAGTTCGCGCGAT CCCTACCGCGTATGGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Repressor; Type III Restriction Res Subunit; GIY-YIG Catalytic Domain-Containing Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MRGSVVPINGRREGTYVLLETALPGRSPCAIGVLLIDPENDRAWFRMRNDFARIADEDDIEVLEAMEAHVLQCISETGAE AYLKSLEESVSNALRITERQSVAVDAFSRVLDRLYQENVEAVAVKPFRTHLPLYSFRAAAGGLSEEMESAVEDWVPAPEG MQLSPDLFVGHVAGRSMEPRIPDGSLNLFRLHPAGSRQGKILLIERFGVLDETARYTIKRYTSRKVYRSEDEWQHENVRL EPLNPEFEAWDVEPEGFAVVAEWLRVIE
Sequences:
>Translated_268_residues MRGSVVPINGRREGTYVLLETALPGRSPCAIGVLLIDPENDRAWFRMRNDFARIADEDDIEVLEAMEAHVLQCISETGAE AYLKSLEESVSNALRITERQSVAVDAFSRVLDRLYQENVEAVAVKPFRTHLPLYSFRAAAGGLSEEMESAVEDWVPAPEG MQLSPDLFVGHVAGRSMEPRIPDGSLNLFRLHPAGSRQGKILLIERFGVLDETARYTIKRYTSRKVYRSEDEWQHENVRL EPLNPEFEAWDVEPEGFAVVAEWLRVIE >Mature_268_residues MRGSVVPINGRREGTYVLLETALPGRSPCAIGVLLIDPENDRAWFRMRNDFARIADEDDIEVLEAMEAHVLQCISETGAE AYLKSLEESVSNALRITERQSVAVDAFSRVLDRLYQENVEAVAVKPFRTHLPLYSFRAAAGGLSEEMESAVEDWVPAPEG MQLSPDLFVGHVAGRSMEPRIPDGSLNLFRLHPAGSRQGKILLIERFGVLDETARYTIKRYTSRKVYRSEDEWQHENVRL EPLNPEFEAWDVEPEGFAVVAEWLRVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30328; Mature: 30328
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSVVPINGRREGTYVLLETALPGRSPCAIGVLLIDPENDRAWFRMRNDFARIADEDDI CCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHEEHHHHHHHCCCCHH EVLEAMEAHVLQCISETGAEAYLKSLEESVSNALRITERQSVAVDAFSRVLDRLYQENVE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AVAVKPFRTHLPLYSFRAAAGGLSEEMESAVEDWVPAPEGMQLSPDLFVGHVAGRSMEPR EEEECCHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCCCCCC IPDGSLNLFRLHPAGSRQGKILLIERFGVLDETARYTIKRYTSRKVYRSEDEWQHENVRL CCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE EPLNPEFEAWDVEPEGFAVVAEWLRVIE ECCCCCCCEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MRGSVVPINGRREGTYVLLETALPGRSPCAIGVLLIDPENDRAWFRMRNDFARIADEDDI CCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHEEHHHHHHHCCCCHH EVLEAMEAHVLQCISETGAEAYLKSLEESVSNALRITERQSVAVDAFSRVLDRLYQENVE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AVAVKPFRTHLPLYSFRAAAGGLSEEMESAVEDWVPAPEGMQLSPDLFVGHVAGRSMEPR EEEECCHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCCCCCC IPDGSLNLFRLHPAGSRQGKILLIERFGVLDETARYTIKRYTSRKVYRSEDEWQHENVRL CCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE EPLNPEFEAWDVEPEGFAVVAEWLRVIE ECCCCCCCEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA