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The map label for this gene is 116619376

Identifier: 116619376

GI number: 116619376

Start: 315543

End: 316280

Strand: Direct

Name: 116619376

Synonym: Acid_0234

Alternate gene names: NA

Gene position: 315543-316280 (Clockwise)

Preceding gene: 116619375

Following gene: 116619377

Centisome position: 3.17

GC content: 63.01

Gene sequence:

>738_bases
ATGACTGCCGGACCATTGTTTCACGCCGGCAAGCTCGATCAGGCGATACAGGCGCTGGGCGCCGAACTCCGGGACAATCC
GGAGGACGTCCAGCGCCGTACGTTTCTATTCGAGTTGCTGTGCTTTGCAGGGGCCTACGACCGGGCCGAGAAGCACCTGG
ATGTCCTTGCGCAGGGCAACAAGGACACTCAATTGGGAGCCTTGTTGTACGCCGGCGCATTGCATGCCGAACGAACGCGA
ACCGAGCTATTTCAGAAGCGGGAGTACCCACGGCCGGCTGGCGACGCTGCCCCGTTGGCCGGGACGCTGAACGGACAGCC
GTTCGAAAGTTTTGCGGATGCCGACCCGAGAATCGGCGCCCGGCTGGAAGTGTACGCCGCCGGGCAGTACATGTGGCTGC
CGCTGGAACACATCGCCTCCATCGAAATGGAGGCGCCGAAGCGCTTGCGGGATCTGCTATGGTCGCCCGCCCTGGTGCGC
ACCGGCCCGGGCTTCAAAGACCGCGAACTCGGTGAGATACTGCTGCCGGTGCTGACGCCGCTGTCCTTCCGGAACGCGGA
CGACGCCGTTCGTTTGGGCAGGATGACCTTGTGGGAGAATACCGAAGACGGCGAACCGGCGCCGGCCGGACAGAAGATGT
TCCTGGTGGACGACGAAGAGTTCCCGATCCTGGAGTTGCGGAAACTCGAATTCCACCCGCGGCAAACGGACTCCGACGAA
CATGCCCCTACGCAATGA

Upstream 100 bases:

>100_bases
GCAGAAGCAGGACGGTTCTCTGGACGCGGCGCTCCCGGCAGGCTACGACTTGAAGGCCGGCCAGAAGGTCTAATCCAAAA
CACGCAGCGGGGATTAATTC

Downstream 100 bases:

>100_bases
TCTTCTCAACGCAATTCCGGGAGAGAATCCGAGCGGTCAGAACCTAAAGTACGCTCCTGTATTCGACAAGATCAAAGAGG
CGCGGCGGGAAGATGACGAC

Product: virulence protein, SciE type

Products: NA

Alternate protein names: ImpE Family Protein; SciE Type Virulence Protein; ImpE-Like Protein; ImpE Protein Superfamily Protein; Secretion Protein; Cytoplasmic Protein SciE

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTAGPLFHAGKLDQAIQALGAELRDNPEDVQRRTFLFELLCFAGAYDRAEKHLDVLAQGNKDTQLGALLYAGALHAERTR
TELFQKREYPRPAGDAAPLAGTLNGQPFESFADADPRIGARLEVYAAGQYMWLPLEHIASIEMEAPKRLRDLLWSPALVR
TGPGFKDRELGEILLPVLTPLSFRNADDAVRLGRMTLWENTEDGEPAPAGQKMFLVDDEEFPILELRKLEFHPRQTDSDE
HAPTQ

Sequences:

>Translated_245_residues
MTAGPLFHAGKLDQAIQALGAELRDNPEDVQRRTFLFELLCFAGAYDRAEKHLDVLAQGNKDTQLGALLYAGALHAERTR
TELFQKREYPRPAGDAAPLAGTLNGQPFESFADADPRIGARLEVYAAGQYMWLPLEHIASIEMEAPKRLRDLLWSPALVR
TGPGFKDRELGEILLPVLTPLSFRNADDAVRLGRMTLWENTEDGEPAPAGQKMFLVDDEEFPILELRKLEFHPRQTDSDE
HAPTQ
>Mature_244_residues
TAGPLFHAGKLDQAIQALGAELRDNPEDVQRRTFLFELLCFAGAYDRAEKHLDVLAQGNKDTQLGALLYAGALHAERTRT
ELFQKREYPRPAGDAAPLAGTLNGQPFESFADADPRIGARLEVYAAGQYMWLPLEHIASIEMEAPKRLRDLLWSPALVRT
GPGFKDRELGEILLPVLTPLSFRNADDAVRLGRMTLWENTEDGEPAPAGQKMFLVDDEEFPILELRKLEFHPRQTDSDEH
APTQ

Specific function: Unknown

COG id: COG4455

COG function: function code R; Protein of avirulence locus involved in temperature-dependent protein secretion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27402; Mature: 27271

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGPLFHAGKLDQAIQALGAELRDNPEDVQRRTFLFELLCFAGAYDRAEKHLDVLAQGN
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
KDTQLGALLYAGALHAERTRTELFQKREYPRPAGDAAPLAGTLNGQPFESFADADPRIGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
RLEVYAAGQYMWLPLEHIASIEMEAPKRLRDLLWSPALVRTGPGFKDRELGEILLPVLTP
EEEEEECCCEEEEEHHHHHHCCCCCHHHHHHHHCCCHHEECCCCCCCCHHHHHHHHHHCC
LSFRNADDAVRLGRMTLWENTEDGEPAPAGQKMFLVDDEEFPILELRKLEFHPRQTDSDE
CCCCCCHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCC
HAPTQ
CCCCC
>Mature Secondary Structure 
TAGPLFHAGKLDQAIQALGAELRDNPEDVQRRTFLFELLCFAGAYDRAEKHLDVLAQGN
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
KDTQLGALLYAGALHAERTRTELFQKREYPRPAGDAAPLAGTLNGQPFESFADADPRIGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
RLEVYAAGQYMWLPLEHIASIEMEAPKRLRDLLWSPALVRTGPGFKDRELGEILLPVLTP
EEEEEECCCEEEEEHHHHHHCCCCCHHHHHHHHCCCHHEECCCCCCCCHHHHHHHHHHCC
LSFRNADDAVRLGRMTLWENTEDGEPAPAGQKMFLVDDEEFPILELRKLEFHPRQTDSDE
CCCCCCHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCC
HAPTQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA