| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619357
Identifier: 116619357
GI number: 116619357
Start: 285394
End: 287097
Strand: Direct
Name: 116619357
Synonym: Acid_0215
Alternate gene names: NA
Gene position: 285394-287097 (Clockwise)
Preceding gene: 116619356
Following gene: 116619364
Centisome position: 2.86
GC content: 60.8
Gene sequence:
>1704_bases ATGGTGCGATTCGCGGTCGCCGCGCTTGTGTGCGTGTCCTTCCTTGTCCTGGCCGACAGTTCCGCGATCCGCTTCATCGA TATCGCGCCGCAGGCGGGCCTGACGCTTCCCAATACGTACGGCGGCAAGGAGAAGAAGGACTTCATTCTGGAAAGCACCG GCACCGGAGCCGCCATATTCGACTACAACGGCGACGGCGCGAACGACATATTCATCGCCAACGGTACTGTGCTCCACGCG AGCGGCCCGCCCACTCGCTCGCAACTCTATCGCAACGATGGAAAGGGGCATTTTACCGAGGTGGGTCTGCAGGCGGGCTT GACCCGAAGCGGCTGGGCGCAAGCCGCCTGTGTAGGCGATTTCGATAACGATGGGCATCCCGATCTGTTCGTCACTTACT ACGGTCCGAACAGCCTCTACCGCAATCGGGGGGACGGGAAATTCACGGATATCAGCGCGGCGGCCGGACTGCCGGCAACG GGTACGCGCTGGGGCTCCGGGTGCGCGTTTATCGACTACGATGGCGACGGCTACCTGGACATTTTCGTCGCCAACTACGT TGACCTGGATGTGGATAAAACTCCCAAGCCGGGCAGCAGCGAGAATTGCGAATGGAAGGGTATGGTGGTGGCTTGCGGTC CCCGTGGATTGCCCATGGGACACAATGTGCTCTACCATAACAACCGCGACGGCACGTTCACCGATGTCTCCGAGAAAGCG GGAATCCTGGCGCCGGGCGGCCGGTATGGGCTGGGTGTGGTCGTTGCGGATTTCGATAATGACGGCTGGCCCGATATCTA TGTAGCCTGTGACCAGACGCCGAGTTTGTTCTATCGCAACAAACACGACGGCACATTCGGTGAGATCGGCGACGCGGCCG GCGTGGCGTACAATGCCGACGGCCACCTGCAGGCCGGCATGGGAATCGCGGTGGCGGACTACGACGGCAACGGTTTTCTC GACCTTGCCAAGACCAATTTTTCCGGCGACCGGCCGTCCCTCTACCGCAACGAAGATGGGCGATTCTTTGAAGATGTATC GGAACGATCCGGACTCGGCAAGAATCAACTGCTGGGATGGGGCATCGTTTTTCTGGATATCGATGAGGATGGATGGCCGG ATCTCGTGCTTGCGAACGGACACGTCTATCCCGAGATCGACCGGTCGTCCATCGGCGAGACCTACCGTCAGAAGACGCTG CTTTATCGGAATCTCGGCGACGGGCGGTTTTCCGACATCACCGGTTCGGCTGGTCCGGCGTTTGCCACGCCGCGTCCTTC GAGGGGGATGGCGACCGGGGATATCGACGGCGATGGAAGGCCGGAAATCCTGATTGTGAACATGAATGAGCGGCCGGCGC TGCTGAAAAACGTGGGCGCCCGGCAGAACGCAATCGCGATCACGCTTACCGGCACGCGCTCCAATCGCAGCGCCATCGGG GCGCGGTGCACCATTGAGGCCGGAGGGAGAAAGCAGATTGCGGACGTCGTGGGCGGGGGAAGCTACTACTCGCAGAGCGC CCTGACGCTTTACTTCGGCGTCGGCAAAGCGGAGAAGATCGATCGTATCGAAGTCCGCTGGCCGGCAGGCGGGAAGCAGT CCTGGTCGGCGATCGCACCGAACCGTACTCTGCTCATTACCGAAGGCAAGGAACAGATTGTGGAACGGCCGTTCGCGCCG GCTATCCAATCGCAAGGTAAATAG
Upstream 100 bases:
>100_bases GGCGCTGCCGAACACCTGCGAGAGGCTGCCGGCGGCAAGGACGCGGCCGTTGCCCGACAGGCGACGCAGGCGCTCCGGGA AATCGGGGTTCATTAGAGTC
Downstream 100 bases:
>100_bases TCTGCCATCTAATCGAACAATGCACGCTTCTTTATATCCTCGATGAGTTCTCGCATGCGGTCGTAATGCGAGCCTTTCCA ATACACGCGCCCGCAGGAAG
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; ASPIC/UnbV; FG-GAP Repeat Protein; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Rhs Family Protein; Aspic/Unbv Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Integrin-Like Protein; Integrin Like Protein; Protein Containing FG-GAP Repeats; Secreted Protein Containing FG-GAP Repeats; Fg-Gap Repeat Protein; ASPIC And UnbV Domain Protein; FG-GAP Repeat Domain-Containing Protein; Invasin/Intimin Cell-Adhesion Domain Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC; Cadherin
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MVRFAVAALVCVSFLVLADSSAIRFIDIAPQAGLTLPNTYGGKEKKDFILESTGTGAAIFDYNGDGANDIFIANGTVLHA SGPPTRSQLYRNDGKGHFTEVGLQAGLTRSGWAQAACVGDFDNDGHPDLFVTYYGPNSLYRNRGDGKFTDISAAAGLPAT GTRWGSGCAFIDYDGDGYLDIFVANYVDLDVDKTPKPGSSENCEWKGMVVACGPRGLPMGHNVLYHNNRDGTFTDVSEKA GILAPGGRYGLGVVVADFDNDGWPDIYVACDQTPSLFYRNKHDGTFGEIGDAAGVAYNADGHLQAGMGIAVADYDGNGFL DLAKTNFSGDRPSLYRNEDGRFFEDVSERSGLGKNQLLGWGIVFLDIDEDGWPDLVLANGHVYPEIDRSSIGETYRQKTL LYRNLGDGRFSDITGSAGPAFATPRPSRGMATGDIDGDGRPEILIVNMNERPALLKNVGARQNAIAITLTGTRSNRSAIG ARCTIEAGGRKQIADVVGGGSYYSQSALTLYFGVGKAEKIDRIEVRWPAGGKQSWSAIAPNRTLLITEGKEQIVERPFAP AIQSQGK
Sequences:
>Translated_567_residues MVRFAVAALVCVSFLVLADSSAIRFIDIAPQAGLTLPNTYGGKEKKDFILESTGTGAAIFDYNGDGANDIFIANGTVLHA SGPPTRSQLYRNDGKGHFTEVGLQAGLTRSGWAQAACVGDFDNDGHPDLFVTYYGPNSLYRNRGDGKFTDISAAAGLPAT GTRWGSGCAFIDYDGDGYLDIFVANYVDLDVDKTPKPGSSENCEWKGMVVACGPRGLPMGHNVLYHNNRDGTFTDVSEKA GILAPGGRYGLGVVVADFDNDGWPDIYVACDQTPSLFYRNKHDGTFGEIGDAAGVAYNADGHLQAGMGIAVADYDGNGFL DLAKTNFSGDRPSLYRNEDGRFFEDVSERSGLGKNQLLGWGIVFLDIDEDGWPDLVLANGHVYPEIDRSSIGETYRQKTL LYRNLGDGRFSDITGSAGPAFATPRPSRGMATGDIDGDGRPEILIVNMNERPALLKNVGARQNAIAITLTGTRSNRSAIG ARCTIEAGGRKQIADVVGGGSYYSQSALTLYFGVGKAEKIDRIEVRWPAGGKQSWSAIAPNRTLLITEGKEQIVERPFAP AIQSQGK >Mature_567_residues MVRFAVAALVCVSFLVLADSSAIRFIDIAPQAGLTLPNTYGGKEKKDFILESTGTGAAIFDYNGDGANDIFIANGTVLHA SGPPTRSQLYRNDGKGHFTEVGLQAGLTRSGWAQAACVGDFDNDGHPDLFVTYYGPNSLYRNRGDGKFTDISAAAGLPAT GTRWGSGCAFIDYDGDGYLDIFVANYVDLDVDKTPKPGSSENCEWKGMVVACGPRGLPMGHNVLYHNNRDGTFTDVSEKA GILAPGGRYGLGVVVADFDNDGWPDIYVACDQTPSLFYRNKHDGTFGEIGDAAGVAYNADGHLQAGMGIAVADYDGNGFL DLAKTNFSGDRPSLYRNEDGRFFEDVSERSGLGKNQLLGWGIVFLDIDEDGWPDLVLANGHVYPEIDRSSIGETYRQKTL LYRNLGDGRFSDITGSAGPAFATPRPSRGMATGDIDGDGRPEILIVNMNERPALLKNVGARQNAIAITLTGTRSNRSAIG ARCTIEAGGRKQIADVVGGGSYYSQSALTLYFGVGKAEKIDRIEVRWPAGGKQSWSAIAPNRTLLITEGKEQIVERPFAP AIQSQGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60659; Mature: 60659
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFAVAALVCVSFLVLADSSAIRFIDIAPQAGLTLPNTYGGKEKKDFILESTGTGAAIF CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEE DYNGDGANDIFIANGTVLHASGPPTRSQLYRNDGKGHFTEVGLQAGLTRSGWAQAACVGD EECCCCCCEEEEECCEEEECCCCCHHHHHHHCCCCCCEEEEHHHHCCCCCCCCEEEEEEC FDNDGHPDLFVTYYGPNSLYRNRGDGKFTDISAAAGLPATGTRWGSGCAFIDYDGDGYLD CCCCCCCCEEEEEECCCHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEECCCCEEE IFVANYVDLDVDKTPKPGSSENCEWKGMVVACGPRGLPMGHNVLYHNNRDGTFTDVSEKA EEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEHHHCC GILAPGGRYGLGVVVADFDNDGWPDIYVACDQTPSLFYRNKHDGTFGEIGDAAGVAYNAD CEECCCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEECCC GHLQAGMGIAVADYDGNGFLDLAKTNFSGDRPSLYRNEDGRFFEDVSERSGLGKNQLLGW CCEECCCEEEEEEECCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEE GIVFLDIDEDGWPDLVLANGHVYPEIDRSSIGETYRQKTLLYRNLGDGRFSDITGSAGPA EEEEEEECCCCCCCEEEECCEECCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC FATPRPSRGMATGDIDGDGRPEILIVNMNERPALLKNVGARQNAIAITLTGTRSNRSAIG CCCCCCCCCCEECCCCCCCCCCEEEEECCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCC ARCTIEAGGRKQIADVVGGGSYYSQSALTLYFGVGKAEKIDRIEVRWPAGGKQSWSAIAP EEEEEECCCCEEHHHHHCCCCEECCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEECC NRTLLITEGKEQIVERPFAPAIQSQGK CCEEEEECCHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MVRFAVAALVCVSFLVLADSSAIRFIDIAPQAGLTLPNTYGGKEKKDFILESTGTGAAIF CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEE DYNGDGANDIFIANGTVLHASGPPTRSQLYRNDGKGHFTEVGLQAGLTRSGWAQAACVGD EECCCCCCEEEEECCEEEECCCCCHHHHHHHCCCCCCEEEEHHHHCCCCCCCCEEEEEEC FDNDGHPDLFVTYYGPNSLYRNRGDGKFTDISAAAGLPATGTRWGSGCAFIDYDGDGYLD CCCCCCCCEEEEEECCCHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEECCCCEEE IFVANYVDLDVDKTPKPGSSENCEWKGMVVACGPRGLPMGHNVLYHNNRDGTFTDVSEKA EEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEHHHCC GILAPGGRYGLGVVVADFDNDGWPDIYVACDQTPSLFYRNKHDGTFGEIGDAAGVAYNAD CEECCCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEECCC GHLQAGMGIAVADYDGNGFLDLAKTNFSGDRPSLYRNEDGRFFEDVSERSGLGKNQLLGW CCEECCCEEEEEEECCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEE GIVFLDIDEDGWPDLVLANGHVYPEIDRSSIGETYRQKTLLYRNLGDGRFSDITGSAGPA EEEEEEECCCCCCCEEEECCEECCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC FATPRPSRGMATGDIDGDGRPEILIVNMNERPALLKNVGARQNAIAITLTGTRSNRSAIG CCCCCCCCCCEECCCCCCCCCCEEEEECCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCC ARCTIEAGGRKQIADVVGGGSYYSQSALTLYFGVGKAEKIDRIEVRWPAGGKQSWSAIAP EEEEEECCCCEEHHHHHCCCCEECCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEECC NRTLLITEGKEQIVERPFAPAIQSQGK CCEEEEECCHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA