| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619292
Identifier: 116619292
GI number: 116619292
Start: 188472
End: 189005
Strand: Direct
Name: 116619292
Synonym: Acid_0148
Alternate gene names: NA
Gene position: 188472-189005 (Clockwise)
Preceding gene: 116619287
Following gene: 116619296
Centisome position: 1.89
GC content: 61.24
Gene sequence:
>534_bases GTGAGTTGGCTCGATGAGATCTGCCTGTCCTGCGGAGTTTGCTGCACTACGCTCTCCATCGTGCATATTACGCAGGCCGA TTTGGACCGTTTGATCCGGGGATTCAATCTCAGCGCGGAGCAGGTCGAAGCCCTGGTACGGCGCGAGGATAGCCAGTTCC GGATCCTGATGGACAACCATGCGGCTTGTGGCGCGTTGTCGGCGCGGGGAGGGCACTATGCCTGCCAGGCCTACGAACAC CGTCCCGGGATCTGCCGGGAGTATGAGTGCTTTATTCTGCTGGGAGTGAAGGACTGGCTCGCCAAGCGAGGCGCAGGCGA ATCTGTTGACAGCGGCAACCCTTTCCATACAGCCGGCGACGAAGAAGAACTCCGGCAGCAGGTGGAAAGCGCTGTGCAAC GCATCAGGTCGGGCAATCTGGCCGATTGCCTGCAACTCCAGAACGGCGCGAGAGGCCGCATGTACGAACGCCTGCCGGAG TTGATCGCGACGCTTTCGGGGGCGGAGTTCGATCACACGTTTCCGCCCGCGTAG
Upstream 100 bases:
>100_bases CGGCGGAGGCGGGCCGCGTGGAGATGGGCTCTGGGGGTTGGGTCATCGTGCTCGGCGGTAAGTCCATTGTAACTGGCCAG GCCTCTGCTATTATTCCAAA
Downstream 100 bases:
>100_bases AAACCGGCGATTACCCCCGCGGCGGAAAGACTCCCTGCAAGGCGATGCAGAAATTCAGGGTGAGATAAGGCATTAAGTTG TTGTGGGGGAGACTGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSWLDEICLSCGVCCTTLSIVHITQADLDRLIRGFNLSAEQVEALVRREDSQFRILMDNHAACGALSARGGHYACQAYEH RPGICREYECFILLGVKDWLAKRGAGESVDSGNPFHTAGDEEELRQQVESAVQRIRSGNLADCLQLQNGARGRMYERLPE LIATLSGAEFDHTFPPA
Sequences:
>Translated_177_residues MSWLDEICLSCGVCCTTLSIVHITQADLDRLIRGFNLSAEQVEALVRREDSQFRILMDNHAACGALSARGGHYACQAYEH RPGICREYECFILLGVKDWLAKRGAGESVDSGNPFHTAGDEEELRQQVESAVQRIRSGNLADCLQLQNGARGRMYERLPE LIATLSGAEFDHTFPPA >Mature_176_residues SWLDEICLSCGVCCTTLSIVHITQADLDRLIRGFNLSAEQVEALVRREDSQFRILMDNHAACGALSARGGHYACQAYEHR PGICREYECFILLGVKDWLAKRGAGESVDSGNPFHTAGDEEELRQQVESAVQRIRSGNLADCLQLQNGARGRMYERLPEL IATLSGAEFDHTFPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19628; Mature: 19497
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLDEICLSCGVCCTTLSIVHITQADLDRLIRGFNLSAEQVEALVRREDSQFRILMDNH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCC AACGALSARGGHYACQAYEHRPGICREYECFILLGVKDWLAKRGAGESVDSGNPFHTAGD CCCCCCCCCCCCCEEEHHCCCCCCCCCEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCC EEELRQQVESAVQRIRSGNLADCLQLQNGARGRMYERLPELIATLSGAEFDHTFPPA HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SWLDEICLSCGVCCTTLSIVHITQADLDRLIRGFNLSAEQVEALVRREDSQFRILMDNH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCC AACGALSARGGHYACQAYEHRPGICREYECFILLGVKDWLAKRGAGESVDSGNPFHTAGD CCCCCCCCCCCCCEEEHHCCCCCCCCCEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCC EEELRQQVESAVQRIRSGNLADCLQLQNGARGRMYERLPELIATLSGAEFDHTFPPA HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA