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The map label for this gene is ybgL [C]

Identifier: 116619208

GI number: 116619208

Start: 91061

End: 91741

Strand: Direct

Name: ybgL [C]

Synonym: Acid_0063

Alternate gene names: 116619208

Gene position: 91061-91741 (Clockwise)

Preceding gene: 116619207

Following gene: 116619209

Centisome position: 0.91

GC content: 64.61

Gene sequence:

>681_bases
ATGAAGATCGATCTGAATTGCGATATGGGCGAGCTGGACGATGCCGCCCACGAGGCGGCGCTGATGCAATACATCACGTC
CGCGAACGTCGCGTGCGGCGGGCATGCGGGCGACGAGCAGACCATGGAACGCACCGTGGTGCTGGCGTTGGAACACGGCG
TCAAGATCGGAGCGCACCCGGGATATCCCGACCGCGAAAATTTCGGGCGGGTCGAGATCTCGATGACTCCGGAGGCGATC
GCCGAGACCGTGCAACAGCAGATCGAGCGGTTGGAGGCAGTGGTCGGGCGGTTGGGCTGCACGATCGTTCATGTGAAGCC
GCACGGCGCCCTCTATAACGTCGCGGTGAAAAACGCCGAGGTGGCGCGCGCCATCGCCACCGGAGTGGCACGCTGGAATC
CAGCGGTGCCGATTTTCGGACTGGCCGGGTCCCCCATGCTCGACGTCTGGCGGGACATGGGGATGAAGGTAGCCGGCGAG
GCCTTTGCCGACCGGCGCTACGAGGCTGATGGCACGCTGCGCTCGCGGAAGTTTGCCGACGCCTTGATCACCGATCCCGC
GGCAGCGGCGGCGCAGGCGCTGCGCTTTGCGCGCGAGGGTGTCGCCGAGACAATCTGTGTTCATGGGGATACACCAGGCT
CGGTGGCTATTCTGAAAGCCTGCCACGACGCGTTAAGATAG

Upstream 100 bases:

>100_bases
TGGGCCAATTGCGCCCGCGCGATGAGGTGCGCTTCGAGCGGATCACGCTCGAAGGCGCATGGCACCTGTTGCGCGAGCAG
GAGGAGTGGTTGTTTTCGCT

Downstream 100 bases:

>100_bases
TGAAAATGAGGCTCTTCGCCGCTGCTGCCGCTTTGTTGTTCACAGCTCCGCTCTACGCCCAGAGCACCTGTACGCTGGTG
GTGAATCCCACGAGCTTCGC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKIDLNCDMGELDDAAHEAALMQYITSANVACGGHAGDEQTMERTVVLALEHGVKIGAHPGYPDRENFGRVEISMTPEAI
AETVQQQIERLEAVVGRLGCTIVHVKPHGALYNVAVKNAEVARAIATGVARWNPAVPIFGLAGSPMLDVWRDMGMKVAGE
AFADRRYEADGTLRSRKFADALITDPAAAAAQALRFAREGVAETICVHGDTPGSVAILKACHDALR

Sequences:

>Translated_226_residues
MKIDLNCDMGELDDAAHEAALMQYITSANVACGGHAGDEQTMERTVVLALEHGVKIGAHPGYPDRENFGRVEISMTPEAI
AETVQQQIERLEAVVGRLGCTIVHVKPHGALYNVAVKNAEVARAIATGVARWNPAVPIFGLAGSPMLDVWRDMGMKVAGE
AFADRRYEADGTLRSRKFADALITDPAAAAAQALRFAREGVAETICVHGDTPGSVAILKACHDALR
>Mature_226_residues
MKIDLNCDMGELDDAAHEAALMQYITSANVACGGHAGDEQTMERTVVLALEHGVKIGAHPGYPDRENFGRVEISMTPEAI
AETVQQQIERLEAVVGRLGCTIVHVKPHGALYNVAVKNAEVARAIATGVARWNPAVPIFGLAGSPMLDVWRDMGMKVAGE
AFADRRYEADGTLRSRKFADALITDPAAAAAQALRFAREGVAETICVHGDTPGSVAILKACHDALR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=237, Percent_Identity=41.7721518987342, Blast_Score=177, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 24114; Mature: 24114

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLNCDMGELDDAAHEAALMQYITSANVACGGHAGDEQTMERTVVLALEHGVKIGAHP
CEEECCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHEEEECCEEECCCC
GYPDRENFGRVEISMTPEAIAETVQQQIERLEAVVGRLGCTIVHVKPHGALYNVAVKNAE
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCHH
VARAIATGVARWNPAVPIFGLAGSPMLDVWRDMGMKVAGEAFADRRYEADGTLRSRKFAD
HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHH
ALITDPAAAAAQALRFAREGVAETICVHGDTPGSVAILKACHDALR
HHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKIDLNCDMGELDDAAHEAALMQYITSANVACGGHAGDEQTMERTVVLALEHGVKIGAHP
CEEECCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHEEEECCEEECCCC
GYPDRENFGRVEISMTPEAIAETVQQQIERLEAVVGRLGCTIVHVKPHGALYNVAVKNAE
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCHH
VARAIATGVARWNPAVPIFGLAGSPMLDVWRDMGMKVAGEAFADRRYEADGTLRSRKFAD
HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHH
ALITDPAAAAAQALRFAREGVAETICVHGDTPGSVAILKACHDALR
HHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA