| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is lolA [C]
Identifier: 116619188
GI number: 116619188
Start: 69600
End: 70208
Strand: Direct
Name: lolA [C]
Synonym: Acid_0043
Alternate gene names: 116619188
Gene position: 69600-70208 (Clockwise)
Preceding gene: 116619187
Following gene: 116619189
Centisome position: 0.7
GC content: 56.81
Gene sequence:
>609_bases GTGTGGGTTGTGGCTCCGGCATTTGCGGGGGACAACGGACTCGACTCCTTATTAAAGGGTGTGGAAGCCCGCTACAACAA GACCAAGACATTGCAAGTCCTTTTTCATGAGGACTATACACCTCCTGGCCGGCCCAAGCGAACGGAAAGCGGGACGCTGA TTTTGCGCAAGCCCGGGAAGATGCGCTGGGATTACGAACAGCCCAAAGGCAAGCTTTTCATCAGCGATGGCAAATTCCTG TGGCTGTATACTCCGGATGACAATCGCGCCGAGAAGATGAAGCTCAAGGAAAGCGACGACATGCGCGCTCCGCTGGCCTT CCTACTCGGTAAGTTGGACTTCCAGAAGGAGTTCCGGAACCTCCAGGCGAAGGCGGAAGGTCCCGACACACGCATCACGG GCGACTCCAAGAGCGACAACCTGCCCTATTCCTCGGTGGAATTCGTGGTCACTCCGGAACAGCGCATCCGTCTGGTTAAA GTGACTGGCTACGACCATTCGGTGCTGGAATTCCGGCTCGAGCAGGAAAAGGCGGACCTGCCTGTGGACGCGAAGCTATT TCAATTCCAGGTACCGAAGGGCGCCCAACTGGTGGAGACGGGACAGTAG
Upstream 100 bases:
>100_bases CCCGGGTTTTTTGGTCTTAACGGACACTCTCCACGTTTCCGCTGTGGCGCGCGTCTAAGTAGTTGTGAGGCCGCTTAAGC TCCTGACTGGGTTACTCGTA
Downstream 100 bases:
>100_bases CGATGGCCGATTTCGTCCTCAAATACGCCGACGGGCGCGGACAGATTCATCAGCAGGTGGCCACGGCGGCCTCGGAGAAG GAGTTGCGCGACAAATACGC
Product: outer membrane lipoprotein carrier protein LolA
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Carrier Protein LolA Family
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MWVVAPAFAGDNGLDSLLKGVEARYNKTKTLQVLFHEDYTPPGRPKRTESGTLILRKPGKMRWDYEQPKGKLFISDGKFL WLYTPDDNRAEKMKLKESDDMRAPLAFLLGKLDFQKEFRNLQAKAEGPDTRITGDSKSDNLPYSSVEFVVTPEQRIRLVK VTGYDHSVLEFRLEQEKADLPVDAKLFQFQVPKGAQLVETGQ
Sequences:
>Translated_202_residues MWVVAPAFAGDNGLDSLLKGVEARYNKTKTLQVLFHEDYTPPGRPKRTESGTLILRKPGKMRWDYEQPKGKLFISDGKFL WLYTPDDNRAEKMKLKESDDMRAPLAFLLGKLDFQKEFRNLQAKAEGPDTRITGDSKSDNLPYSSVEFVVTPEQRIRLVK VTGYDHSVLEFRLEQEKADLPVDAKLFQFQVPKGAQLVETGQ >Mature_202_residues MWVVAPAFAGDNGLDSLLKGVEARYNKTKTLQVLFHEDYTPPGRPKRTESGTLILRKPGKMRWDYEQPKGKLFISDGKFL WLYTPDDNRAEKMKLKESDDMRAPLAFLLGKLDFQKEFRNLQAKAEGPDTRITGDSKSDNLPYSSVEFVVTPEQRIRLVK VTGYDHSVLEFRLEQEKADLPVDAKLFQFQVPKGAQLVETGQ
Specific function: Participates In The Translocation Of Lipoproteins From The Inner Membrane To The Outer Membrane. Only Forms A Complex With A Lipoprotein If The Residue After The N-Terminal Cys Is Not An Aspartate (The Asp Acts As A Targeting Signal To Indicate That The L
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23067; Mature: 23067
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVVAPAFAGDNGLDSLLKGVEARYNKTKTLQVLFHEDYTPPGRPKRTESGTLILRKPGK CEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCC MRWDYEQPKGKLFISDGKFLWLYTPDDNRAEKMKLKESDDMRAPLAFLLGKLDFQKEFRN CCCCCCCCCCCEEEECCCEEEEECCCCCCHHHEECCCCCCCCCCHHHHHHHCCHHHHHHC LQAKAEGPDTRITGDSKSDNLPYSSVEFVVTPEQRIRLVKVTGYDHSVLEFRLEQEKADL CCCCCCCCCCEEECCCCCCCCCCCCEEEEECHHHHEEEEEEECCCCCEEEEEEHHHHCCC PVDAKLFQFQVPKGAQLVETGQ CCCCEEEEEECCCCCCEEECCC >Mature Secondary Structure MWVVAPAFAGDNGLDSLLKGVEARYNKTKTLQVLFHEDYTPPGRPKRTESGTLILRKPGK CEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCC MRWDYEQPKGKLFISDGKFLWLYTPDDNRAEKMKLKESDDMRAPLAFLLGKLDFQKEFRN CCCCCCCCCCCEEEECCCEEEEECCCCCCHHHEECCCCCCCCCCHHHHHHHCCHHHHHHC LQAKAEGPDTRITGDSKSDNLPYSSVEFVVTPEQRIRLVKVTGYDHSVLEFRLEQEKADL CCCCCCCCCCEEECCCCCCCCCCCCEEEEECHHHHEEEEEEECCCCCEEEEEEHHHHCCC PVDAKLFQFQVPKGAQLVETGQ CCCCEEEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA