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The map label for this gene is yaaA [C]

Identifier: 116516903

GI number: 116516903

Start: 1397202

End: 1397930

Strand: Reverse

Name: yaaA [C]

Synonym: SPD_1378

Alternate gene names: 116516903

Gene position: 1397930-1397202 (Counterclockwise)

Preceding gene: 116515817

Following gene: 116515899

Centisome position: 68.32

GC content: 41.98

Gene sequence:

>729_bases
ATGAAAATTTTAATCCCAACAGCAAAAGAAATGAACACAGACTTGCCAAGTATCGAGGCAATTCCTTTAAAACCAGAAAG
TCAGACCGTGCTTGATGCCTTGGCTCTCTATTCTGCCAGTCAATTGGAGAGTTTCTACAAGGTATCAGCTGAGAAAGCGG
CGGAAGAATTTCAAAATATCCAAGCTTTGAAAAGGCAAACTGCTCAACACTATCCAGCCTTGAAACTTTTTGATGGGCTT
ATGTACCGCAACATTAAGAGAGATAAGCTGACCGAGGCGGAACAAGATTATCTTGAAAATCATGTCTTCATTACCTCGGC
TTTGTACGGTGTTGTTCCAGCCTTGTCACCCATGGCTCCTCACCGTTTGGATTTTTTGATGAAATTAAAAGTCGCTGGTA
AGACTTTGAAGAGCCATTGGAAGGCAGTCTATGATGAAGCTCTGAAGAAGGAAGAAGTGATTTTCTCTCTCTTGTCATCA
GAGTTTGAGACTGTATTTTCTAAGGAAATCAGAGCAAAGATGGTGACCTTCAAATTCATGGAGGATAGAGGCGGTCAGCT
GAAGATTCACTCAACTATCTCCAAGAAAGCGCGCGGGGCCTTTCTAACAGCTTTAATAGAAAATCAAGTACAAACTGTGG
GGGAAGCACGTCGCTTGAACTTTGCTGGATTTGTTTACCGAGAAGATTTGTCACAACCACAGGGATTGGTTTTTGTAAAG
GAAGTATAG

Upstream 100 bases:

>100_bases
CTGGTTAGGATGGCCCAAATAAATAGAAAAACCTCGGTCAAACCGAGGTTTTTCAAATGAATTTCTTGGTTGTGGCTAAA
AAATATGCTACACTATCAAT

Downstream 100 bases:

>100_bases
AAATCAGATAAGAGAAAAGTCAGCACGATTATGCTGACTTTTTTGATAACTTATAAAGTATTGGACAAATGAATCTCATT
TGATAAGGTGTTAAGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNIQALKRQTAQHYPALKLFDGL
MYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAPHRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSS
EFETVFSKEIRAKMVTFKFMEDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
EV

Sequences:

>Translated_242_residues
MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNIQALKRQTAQHYPALKLFDGL
MYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAPHRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSS
EFETVFSKEIRAKMVTFKFMEDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
EV
>Mature_242_residues
MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNIQALKRQTAQHYPALKLFDGL
MYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAPHRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSS
EFETVFSKEIRAKMVTFKFMEDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
EV

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=253, Percent_Identity=28.8537549407115, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1378_STRP2 (Q04JK0)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816838.1
- STRING:   Q04JK0
- EnsemblBacteria:   EBSTRT00000019396
- GeneID:   4442088
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1378
- eggNOG:   COG3022
- GeneTree:   EBGT00050000027487
- HOGENOM:   HBG697132
- OMA:   HDFHTKV
- ProtClustDB:   PRK02101
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 27466; Mature: 27466

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNI
CEEECCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALKRQTAQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAP
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEE
EV
CC
>Mature Secondary Structure
MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNI
CEEECCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALKRQTAQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAP
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEE
EV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA