Click here to switch to the map view.

The map label for this gene is psaC [C]

Identifier: 116516771

GI number: 116516771

Start: 1477337

End: 1478185

Strand: Direct

Name: psaC [C]

Synonym: SPD_1462

Alternate gene names: 116516771

Gene position: 1477337-1478185 (Clockwise)

Preceding gene: 116515895

Following gene: 116515973

Centisome position: 72.2

GC content: 41.81

Gene sequence:

>849_bases
ATGATTGCAGAATTTATCGATGGATTGCAAAAATTCCATTTCCTACAAAATGCCTTGATAACAGCTATTGTCGTCGGGAT
TGTAGCTGGAGCTGTGGGATGTTTCATTATTCTACGCGGGATGTCACTCATGGGAGATGCCATTTCACATGCTGTCTTAC
CAGGTGTAGCCCTCTCCTTCATCTTGGGCCTTGACTTCTTTATCGGAGCCATTGTCTTTGGATTGCTAGCTGCCATCATC
ATTACCTACATCAAAGGAAACTCGATTATCAAAAGCGATACCGCCATCGGCATTACCTTTTCTTCTTTCTTAGCCCTCGG
TATCATCTTGATTGGTGTCGCTAAAAGTTCAACTGACCTTTTCCATATCCTTTTTGGTAATATCCTGGCCGTCCAAGATA
CGGATATGTTTATTACTATGGGTGTGGGGGCAGCCATCCTCTTGTTAATCTGGATTTTCTTCAAGCAACTCTTGATAACT
TCCTTTGATGAACTCTTGGCTAAAGCCATGGGAATGCCTGTCAATTTCTATCACTACCTTCTCATGGTACTCCTGACTCT
CGTGTCTGTGACAGCCATGCAAAGTGTCGGAACTATCCTGATTGTAGCCATGCTGATTACCCCAGCTGCAACTGCTTATC
TGTATGCTAATAGTCTGAAAAGCATGATTTTCCTTTCCTCAACCTTCGGAGCTACTGCTTCAGTTTTGGGACTCTTTATT
GGCTATAGTTTTAATGTTGCGGCAGGTTCTAGTATCGTGCTTACAGCTGCTAGTTTCTTTCTCATTAGCTTCTTTATCGC
TCCCAAACAACGATATTTGAAACTGAAAAATAAACATTTGTTAAAATAA

Upstream 100 bases:

>100_bases
ATCGAGAAGTGATTGCCTTTGGTCCAACAAAAGAAACTTTTACCGAAACCAATCTAAAAGAAGCTTACGGTAATCAACTC
TTTTTCAATGGAGGTGACCT

Downstream 100 bases:

>100_bases
GGGGCAAAGCCCTAATAAATTGGAGGATCTAATGAAAAAATTAGGTACATTACTCGTTCTCTTTCTTTCTGCAATCATTC
TTGTAGCATGTGCTAGCGGA

Product: manganese ABC transporter permease

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIAEFIDGLQKFHFLQNALITAIVVGIVAGAVGCFIILRGMSLMGDAISHAVLPGVALSFILGLDFFIGAIVFGLLAAII
ITYIKGNSIIKSDTAIGITFSSFLALGIILIGVAKSSTDLFHILFGNILAVQDTDMFITMGVGAAILLLIWIFFKQLLIT
SFDELLAKAMGMPVNFYHYLLMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYANSLKSMIFLSSTFGATASVLGLFI
GYSFNVAAGSSIVLTAASFFLISFFIAPKQRYLKLKNKHLLK

Sequences:

>Translated_282_residues
MIAEFIDGLQKFHFLQNALITAIVVGIVAGAVGCFIILRGMSLMGDAISHAVLPGVALSFILGLDFFIGAIVFGLLAAII
ITYIKGNSIIKSDTAIGITFSSFLALGIILIGVAKSSTDLFHILFGNILAVQDTDMFITMGVGAAILLLIWIFFKQLLIT
SFDELLAKAMGMPVNFYHYLLMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYANSLKSMIFLSSTFGATASVLGLFI
GYSFNVAAGSSIVLTAASFFLISFFIAPKQRYLKLKNKHLLK
>Mature_282_residues
MIAEFIDGLQKFHFLQNALITAIVVGIVAGAVGCFIILRGMSLMGDAISHAVLPGVALSFILGLDFFIGAIVFGLLAAII
ITYIKGNSIIKSDTAIGITFSSFLALGIILIGVAKSSTDLFHILFGNILAVQDTDMFITMGVGAAILLLIWIFFKQLLIT
SFDELLAKAMGMPVNFYHYLLMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYANSLKSMIFLSSTFGATASVLGLFI
GYSFNVAAGSSIVLTAASFFLISFFIAPKQRYLKLKNKHLLK

Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=246, Percent_Identity=32.520325203252, Blast_Score=104, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 30187; Mature: 30187

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAEFIDGLQKFHFLQNALITAIVVGIVAGAVGCFIILRGMSLMGDAISHAVLPGVALSF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGLDFFIGAIVFGLLAAIIITYIKGNSIIKSDTAIGITFSSFLALGIILIGVAKSSTDL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHH
FHILFGNILAVQDTDMFITMGVGAAILLLIWIFFKQLLITSFDELLAKAMGMPVNFYHYL
HHHHHCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYANSLKSMIFLSSTFGATASVLGLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GYSFNVAAGSSIVLTAASFFLISFFIAPKQRYLKLKNKHLLK
HCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAEFIDGLQKFHFLQNALITAIVVGIVAGAVGCFIILRGMSLMGDAISHAVLPGVALSF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGLDFFIGAIVFGLLAAIIITYIKGNSIIKSDTAIGITFSSFLALGIILIGVAKSSTDL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHH
FHILFGNILAVQDTDMFITMGVGAAILLLIWIFFKQLLITSFDELLAKAMGMPVNFYHYL
HHHHHCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYANSLKSMIFLSSTFGATASVLGLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GYSFNVAAGSSIVLTAASFFLISFFIAPKQRYLKLKNKHLLK
HCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7927711 [H]