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The map label for this gene is potH [C]

Identifier: 116516726

GI number: 116516726

Start: 214281

End: 214907

Strand: Reverse

Name: potH [C]

Synonym: SPD_0224

Alternate gene names: 116516726

Gene position: 214907-214281 (Counterclockwise)

Preceding gene: 116516814

Following gene: 116515628

Centisome position: 10.5

GC content: 39.23

Gene sequence:

>627_bases
ATGGAACGTAAAAAACTAAATATTTGGACAGCCTCCTCTTTCTTCCTCTTTCTTACCTATCTTGTCTTTCTCGTTTATCC
TATCATTACCGTGCTCAAGCAAGCACTTATACATGAAGGACAATTCTCACTAGCTAATTTTGTCACTTTCTTTAGTAAAG
CCTACTACTCTGAGACACTAGTCAACAGTTTCAGGGTTTCCATTACCGCTACTGTCACTTCCTTAGTTGTAGGAACCCTA
TTAGCTTATCTCTTCTCTATGTATGACTTCCAGGGGAAGAAATTTCTACAAATATTGATTATCATTGCTTCCATGTCAGC
TCCTTTCGTAGGAGCCTACTCCTGGGTTCTCTTGCTGGGACGAAATGGGGTCATCACTAAATTTTTGACAAATGCCCTTC
ATCTTCCAGCTATCGATATTTATGGATTCAAAGGAATTGTACTTGTCTTTACACTGCAACTATTCCCACTGGTATTTCTA
TATGTTGCTGGAACAATGAACAGTATTGACAATTCTCTACTTGAAGCAGCTGAAAGCATGGGGTCCTTCGGATTTAAACC
TATCGTAACGGTTGTTTTACCTCTTCTAGTTCCAACCTTACTAGCAGCTCCTTGCTTGTATTTATGA

Upstream 100 bases:

>100_bases
GAACTACAAAAAGGCAATCGTATTCGTCTACGAATCAATACGCAAAAATTAAACATCTTTTCTGCAGATGGTTCCCAAAA
CCTGATAAAAGGAGTCAACC

Downstream 100 bases:

>100_bases
GAGCATTCTCAGACTTTGGAACGCCTATGTTGATTGGCGAAGGATATCGGACTTTCCCTGTCCTGATTTATACCCAATTT
ATTAGCGAGGTTGGAGGAAA

Product: iron(III) ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; Iron(III)-Transport System Permease SfuB; ABC Transporter; ABC-Type Iron(III) Transport System Permease Component; Iron(III)-Transport System Permease Protein SfuB; Spermidine/Putrescine ABC Transporter Permease; Permease BitE; ABC-Type Fe3+ Transport System; ABC Transporter Membrane-Spanning Permease; Fe3+ ABC Transporter Permease; Iron(III) Transport System Permease SfuB; Inner Membrane Component Of ABC Transporter; Polyamine ABC Transporter Permease Protein; ABC Transporter Membrane Spanning Protein; Fe-ABC Transporter Permease Component; Ferric Iron ABC Transporter Permease; Spermidine/Putrescine ABC Transporter Permease Protein

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MERKKLNIWTASSFFLFLTYLVFLVYPIITVLKQALIHEGQFSLANFVTFFSKAYYSETLVNSFRVSITATVTSLVVGTL
LAYLFSMYDFQGKKFLQILIIIASMSAPFVGAYSWVLLLGRNGVITKFLTNALHLPAIDIYGFKGIVLVFTLQLFPLVFL
YVAGTMNSIDNSLLEAAESMGSFGFKPIVTVVLPLLVPTLLAAPCLYL

Sequences:

>Translated_208_residues
MERKKLNIWTASSFFLFLTYLVFLVYPIITVLKQALIHEGQFSLANFVTFFSKAYYSETLVNSFRVSITATVTSLVVGTL
LAYLFSMYDFQGKKFLQILIIIASMSAPFVGAYSWVLLLGRNGVITKFLTNALHLPAIDIYGFKGIVLVFTLQLFPLVFL
YVAGTMNSIDNSLLEAAESMGSFGFKPIVTVVLPLLVPTLLAAPCLYL
>Mature_208_residues
MERKKLNIWTASSFFLFLTYLVFLVYPIITVLKQALIHEGQFSLANFVTFFSKAYYSETLVNSFRVSITATVTSLVVGTL
LAYLFSMYDFQGKKFLQILIIIASMSAPFVGAYSWVLLLGRNGVITKFLTNALHLPAIDIYGFKGIVLVFTLQLFPLVFL
YVAGTMNSIDNSLLEAAESMGSFGFKPIVTVVLPLLVPTLLAAPCLYL

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine. [C]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23144; Mature: 23144

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKKLNIWTASSFFLFLTYLVFLVYPIITVLKQALIHEGQFSLANFVTFFSKAYYSETL
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VNSFRVSITATVTSLVVGTLLAYLFSMYDFQGKKFLQILIIIASMSAPFVGAYSWVLLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC
RNGVITKFLTNALHLPAIDIYGFKGIVLVFTLQLFPLVFLYVAGTMNSIDNSLLEAAESM
CCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSFGFKPIVTVVLPLLVPTLLAAPCLYL
CCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERKKLNIWTASSFFLFLTYLVFLVYPIITVLKQALIHEGQFSLANFVTFFSKAYYSETL
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VNSFRVSITATVTSLVVGTLLAYLFSMYDFQGKKFLQILIIIASMSAPFVGAYSWVLLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC
RNGVITKFLTNALHLPAIDIYGFKGIVLVFTLQLFPLVFLYVAGTMNSIDNSLLEAAESM
CCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSFGFKPIVTVVLPLLVPTLLAAPCLYL
CCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA