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The map label for this gene is 116516476

Identifier: 116516476

GI number: 116516476

Start: 1266679

End: 1266957

Strand: Reverse

Name: 116516476

Synonym: SPD_1235

Alternate gene names: NA

Gene position: 1266957-1266679 (Counterclockwise)

Preceding gene: 116515656

Following gene: 116515379

Centisome position: 61.92

GC content: 41.94

Gene sequence:

>279_bases
ATGAACAAACAGTATAGTTACCCACTAGATTTGTCGTGGAGCACTGAAGAACTTGCTTCAGTGCTTTCTTTTTTTAATGA
TGTTGAAGCTGCCTATGAAGGCAAAGTAGAGGCTAAAAAGTTACTGGACTCCTATAAGGGATTCAAAGCGGTCGTGCCAA
GCAAGAGCGAAGAGAAACGTTTGGGACGAGAATTTGAAACGGTTAGTGGCTATTCACTTTACCGAGCAGTTCAGGCTGCC
AAAGAAAAAGGGGAAGGAAAGATTTCTCTTGGAAAGTAA

Upstream 100 bases:

>100_bases
TGCAAATCGGTTTTAATGAAGATGAGATTCGTGCTTTTCTCCCTCGTAGTTATCGTAAGCAAGAACTAAAAGAAGCAAGA
ATGAGAGCTGGTATTAGTTA

Downstream 100 bases:

>100_bases
ATTTGAATTTGCTAAAGAGCTTGTTAAGAAAGCAGGCCAGTACATTCTTGACCATATGCAGGAAGACTTGCGTGTTGAAA
CCAAGTCCTCTTCAACAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MNKQYSYPLDLSWSTEELASVLSFFNDVEAAYEGKVEAKKLLDSYKGFKAVVPSKSEEKRLGREFETVSGYSLYRAVQAA
KEKGEGKISLGK

Sequences:

>Translated_92_residues
MNKQYSYPLDLSWSTEELASVLSFFNDVEAAYEGKVEAKKLLDSYKGFKAVVPSKSEEKRLGREFETVSGYSLYRAVQAA
KEKGEGKISLGK
>Mature_92_residues
MNKQYSYPLDLSWSTEELASVLSFFNDVEAAYEGKVEAKKLLDSYKGFKAVVPSKSEEKRLGREFETVSGYSLYRAVQAA
KEKGEGKISLGK

Specific function: Unknown

COG id: COG4476

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0223 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1235_STRP2 (Q04JU6)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816702.1
- ProteinModelPortal:   Q04JU6
- SMR:   Q04JU6
- STRING:   Q04JU6
- EnsemblBacteria:   EBSTRT00000019576
- GeneID:   4442946
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1235
- eggNOG:   COG4476
- GeneTree:   EBGT00050000027744
- HOGENOM:   HBG313637
- OMA:   IVPGKAE
- ProtClustDB:   PRK04387
- HAMAP:   MF_01041
- InterPro:   IPR007920
- PIRSF:   PIRSF037260
- ProDom:   PD062738

Pfam domain/function: PF05256 UPF0223

EC number: NA

Molecular weight: Translated: 10308; Mature: 10308

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQYSYPLDLSWSTEELASVLSFFNDVEAAYEGKVEAKKLLDSYKGFKAVVPSKSEEKR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHH
LGREFETVSGYSLYRAVQAAKEKGEGKISLGK
HHHHHHHCCCHHHHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure
MNKQYSYPLDLSWSTEELASVLSFFNDVEAAYEGKVEAKKLLDSYKGFKAVVPSKSEEKR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHH
LGREFETVSGYSLYRAVQAAKEKGEGKISLGK
HHHHHHHCCCHHHHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA