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The map label for this gene is 116516418

Identifier: 116516418

GI number: 116516418

Start: 1376421

End: 1376615

Strand: Reverse

Name: 116516418

Synonym: SPD_1360

Alternate gene names: NA

Gene position: 1376615-1376421 (Counterclockwise)

Preceding gene: 116515986

Following gene: 116517110

Centisome position: 67.28

GC content: 39.49

Gene sequence:

>195_bases
ATGTCACTTGAAAACAAATTGGAACAAGCAACAGGCGCTGTCAAAGAAGGTTTTGGTAAAGTTACTGGAGACAGCAAGAC
AGAACTTGAAGGAGCTGTTGAAAAAACAGTTGCTAAGGCAAAAGACGTTGTAGAAGACGCAAAAGGTGCTGTAGAAGGTG
CCGTTGAAGGTTTGAAAAACGTTTTTACTAAATAA

Upstream 100 bases:

>100_bases
TTTCTTGTTTCTGAGCACATTGTTTGACTTTCCTTAGTATTCGGTATAAACTATATGTAACCGGTAACACATATCGGAAT
AAACTAAAGGAGACAATCAT

Downstream 100 bases:

>100_bases
TAGGAAAAAATCAAGGGTTTCATTTTCCCTTGATTTTTTCTATTCTTATAAATAATTTTCTGCGACGGCTGTATCTCCTG
GGTAGGATTCTTTCTTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MSLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKNVFTK

Sequences:

>Translated_64_residues
MSLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKNVFTK
>Mature_63_residues
SLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKNVFTK

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 6639; Mature: 6507

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKN
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFTK
HHCC
>Mature Secondary Structure 
SLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKN
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFTK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234 [H]