| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516235
Identifier: 116516235
GI number: 116516235
Start: 395368
End: 395757
Strand: Reverse
Name: 116516235
Synonym: SPD_0394
Alternate gene names: NA
Gene position: 395757-395368 (Counterclockwise)
Preceding gene: 116516179
Following gene: 116516227
Centisome position: 19.34
GC content: 42.31
Gene sequence:
>390_bases ATGGGAATTGAAGAACAACTTGGCGAAATCGTTATCGCCCCACGTGTACTTGAAAAAATCATTGCTATCGCTACTGCAAA GGTAGAGGGTGTTCACTCTTTTTCAAACAGATCAGTGTCTGATACCCTTTCAAAACTTTCACTCGGCCGTGGCATTTATC TTAAAAACGTGGACGAAGAACTCACAGCAGATATCTATCTCTACCTTGAGTACGGAGTAAAAGTTCCTAAGGTAGCGGTT GCTATCCAGAAAGCTGTCAAAGATGCCGTCCGTAATATGGCTGATGTAGAACTCGCTGCTATCAATATTCACGTTGCAGG TATCGTCCCAGATAAAACACCAAAACCAGAATTGAAAGATCTATTTGACGAGGACTTCCTCAATGACTAG
Upstream 100 bases:
>100_bases AAACGTTCCAGACTTCATCGAAGCAGGACAAAAACTCGTTATCAACACTGCAGAAGGAACTTACGTTTCTCGTGCCTAAT CTCTAGAAAGAGGTCATTCT
Downstream 100 bases:
>100_bases TCCACTATTAGAATCTAGACGCCAACTCCGTAAATGCGCTTTTCAAGCTCTCATGAGCCTTGAGTTCGGTACGGATGTCG AAACTGCTTGTCGTTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGIEEQLGEIVIAPRVLEKIIAIATAKVEGVHSFSNRSVSDTLSKLSLGRGIYLKNVDEELTADIYLYLEYGVKVPKVAV AIQKAVKDAVRNMADVELAAINIHVAGIVPDKTPKPELKDLFDEDFLND
Sequences:
>Translated_129_residues MGIEEQLGEIVIAPRVLEKIIAIATAKVEGVHSFSNRSVSDTLSKLSLGRGIYLKNVDEELTADIYLYLEYGVKVPKVAV AIQKAVKDAVRNMADVELAAINIHVAGIVPDKTPKPELKDLFDEDFLND >Mature_128_residues GIEEQLGEIVIAPRVLEKIIAIATAKVEGVHSFSNRSVSDTLSKLSLGRGIYLKNVDEELTADIYLYLEYGVKVPKVAVA IQKAVKDAVRNMADVELAAINIHVAGIVPDKTPKPELKDLFDEDFLND
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 14134; Mature: 14002
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEEQLGEIVIAPRVLEKIIAIATAKVEGVHSFSNRSVSDTLSKLSLGRGIYLKNVDEE CCCHHHHHHEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCHH LTADIYLYLEYGVKVPKVAVAIQKAVKDAVRNMADVELAAINIHVAGIVPDKTPKPELKD HHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCCCCHHHH LFDEDFLND HHHHHCCCC >Mature Secondary Structure GIEEQLGEIVIAPRVLEKIIAIATAKVEGVHSFSNRSVSDTLSKLSLGRGIYLKNVDEE CCHHHHHHEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCHH LTADIYLYLEYGVKVPKVAVAIQKAVKDAVRNMADVELAAINIHVAGIVPDKTPKPELKD HHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCCCCHHHH LFDEDFLND HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA